mRNA_P-littoralis_Contig1514.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A7S3MFH5_9STRA (Elongation factor G, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFH5_9STRA) HSP 1 Score: 776 bits (2003), Expect = 7.770e-273 Identity = 412/614 (67.10%), Postives = 475/614 (77.36%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDK-----------RFHLNIPINVKNIVLN*SSVLLTLMMILLNYMWQKKNQQ*SS*ELQFV--RQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAM------------EVH*RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQAAK 1770
RNIGISAHIDSGKTTLTERILFYTGRI+ IHDVRGKDGVGAKMDSMDLEREKGITIQSAATYC+WG+NHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAF+NKLDRMGAN ++ AL+GMRQQL+LGAA VQ+P+GLEG+HEGV+D+I REAVYFLG KGL+I+ K ++ + V +I + L M ++ + +L+ RQTIA+KFVPVFMGSA+KNKGVQLLLDGVNDYLPAP E+ N LDVSN E+ V LKCD APL ALAFKLEES+FGQLTY+R+YQGT++KG +V NTK+GKKVKVPRLVRMHSNEM+DV+SA AGDVVA+FGMDCSSMDTFTDGT+NYSMVSMFVPNPVMSLSVKPK+ I NF KAM +++ + + + Y+ + + C T + Y ++I+ K+ F+YLHKKQSGGSGQYAKV GYIEPLE+ELI KGVEFEFDNQV+G NIPTE+I SCEKGARAAC KGVL+G PL VRVV+ DG AH VDSND++FQLAMQY IRQA K
Sbjct: 38 RNIGISAHIDSGKTTLTERILFYTGRINEIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCRWGQNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFVNKLDRMGANPLK-ALNGMRQQLKLGAALVQVPMGLEGEHEGVVDIINREAVYFLGEKGLNIQRKPVPEQYVEQCEKYRAELIERVADI----DDEIAELFMA---------EEEPTPKQLKDAIRRQTIARKFVPVFMGSAFKNKGVQLLLDGVNDYLPAPPEVRNVALDVSNGEAEVELKCDGGAPLVALAFKLEESKFGQLTYVRIYQGTLKKGSMVLNTKTGKKVKVPRLVRMHSNEMLDVDSAGAGDVVALFGMDCSSMDTFTDGTINYSMVSMFVPNPVMSLSVKPKESSGIANFGKAMGKFTREDPTLRVDINEKTGETVMSGMGELHLEIYVERMKREYNVECVTGNPAV----AYKETIT-------NKATFDYLHKKQSGGSGQYAKVQGYIEPLEDELIAKGVEFEFDNQVVGMNIPTEYITSCEKGARAACLKGVLSGNPLVRVRVVLIDGAAHAVDSNDLSFQLAMQYAIRQAVK 626
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: I2CNZ5_NANGC (Elongation factor G, mitochondrial n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNZ5_NANGC) HSP 1 Score: 634 bits (1635), Expect = 1.410e-216 Identity = 341/609 (55.99%), Postives = 422/609 (69.29%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMILLNYMWQKKNQQ*SS*ELQFVRQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAME------------VH*RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVE--------FEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQAAK 1770
RNIGISAHIDSGKTTLTERILFYTGRI IHDV+GKDGVGAKMDSMDLEREKGITIQSAATYC WG +HINIIDTPGHVDFT+EVERALRVLDGA+LV+CGV+G+QSQ++TVDRQMKRYNVPR+AFINKLDR GAN + D +RQ LRL AA VQ+PIGLE +H+GV+DLI R+A F G +G + + + V + L + + + RQT+A FVPVFMGSA+KNKGVQ LLDGV DYLP P ++TN LD++ +E+ V + C + P ALAFKLEE +FGQLTY+RVYQGTI++G ++N ++ KKVKVPRLVRMHSNE+ ++ES SAGDV A+FG+DCSSMD+FTDGTV Y++ SMFVP PV+SL+VKPK NFSKA++ + + + + Y+ + + C + Y ++I K+NF YLHKKQSGG GQYA+V+GY+EPLEE + G E FEF N+V+GTNIP E+IPSCEKGAR A KG L G+P GVRVV+TDG H VDS+DMAF++A Y +R+A +
Sbjct: 72 RNIGISAHIDSGKTTLTERILFYTGRIREIHDVKGKDGVGAKMDSMDLEREKGITIQSAATYCSWGDHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVAGVQSQSITVDRQMKRYNVPRLAFINKLDRAGANPWKVVGD-LRQYLRLNAAAVQVPIGLEAEHKGVVDLIDRKAYVFAGERGEVVTEVPIEGGLEATVLSKRNEMIERLADVDDEIAELFLAETEVPPEVLRAAIRRQTLALAFVPVFMGSAFKNKGVQRLLDGVVDYLPNPSQVTNYALDLTQDEARVPVPCKENLPAVALAFKLEEGKFGQLTYMRVYQGTIKRGGWLFNMRNDKKVKVPRLVRMHSNELEEIESISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNV----NYRETIR-------KKANFNYLHKKQSGGQGQYARVVGYVEPLEEGEGEDGKEGGKEGGLGFEFVNKVVGTNIPPEYIPSCEKGARDAMEKGPLTGHPSQGVRVVLTDGTTHAVDSSDMAFRIAAAYAVREAMR 668
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A6S9LCG4_HETAK (Elongation factor G, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LCG4_HETAK) HSP 1 Score: 622 bits (1604), Expect = 2.200e-212 Identity = 334/597 (55.95%), Postives = 425/597 (71.19%), Query Frame = 1
Query: 1 FRNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMI----LLNYMWQKKNQQ*SS*ELQFVRQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAMEVH*RGS-----YSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQA 1764
+RNIGISAHIDSGKTTLTERILFYTGRI+AIHDV+GKDGVGAKMDSMDLEREKGITIQSAAT+ QWG + INIIDTPGHVDFT+EVERALRVLDG +LV+CGV+G+QSQ+LTVDRQMKRYNVPRVAFINKLDRMG+N + D +R+QL L AA VQLP+GLE H GV+DL+ R + F G+ G I + +P +++ + L+ + + ++ + + RQTIA FVPVFMGSA+KNKGVQ LLDGV DYLP P E+ N+ LD+ N+E+ V++ CDP+APL ALAFKLEE RFGQLTY+R+YQG+I+KG ++N +GKK+KVPRLVRMHS+EM D+E A AGDVVA+FG+DC+SM+TFTDG + ++M SM VP+ VMSL+VKPK + NF+KA+ + ++ S I + + L Y + C Q + ++ F++LHKKQSGGSGQYAKV+GY+EP E +FEF N+++GT IP E+ PSC+KG+ A AKG L G P+ G RVV+TDGQAH VDS+D+AF+LAMQ ++ A
Sbjct: 53 YRNIGISAHIDSGKTTLTERILFYTGRINAIHDVKGKDGVGAKMDSMDLEREKGITIQSAATFAQWGDHFINIIDTPGHVDFTIEVERALRVLDGGVLVLCGVAGVQSQSLTVDRQMKRYNVPRVAFINKLDRMGSNPWKVIRD-LREQLALNAAAVQLPLGLEERHTGVVDLVERRSYVFAGAHGEVIEEGP----VPEDLQELAQEKRHELIERLADHDDEIAELFLMEEEPDVPTLKAAIRRQTIALNFVPVFMGSAFKNKGVQALLDGVVDYLPTPREVPNTALDLDNHEAPVAVACDPAAPLVALAFKLEEGRFGQLTYMRIYQGSIKKGGWIHNLNTGKKLKVPRLVRMHSDEMEDIEEAGAGDVVAMFGVDCASMETFTDGRLKWAMTSMHVPDAVMSLAVKPKTTKMSDNFTKALTKFTKEDPTLRVHTDSVSKQTILSGMGELHLEVYLERLSREYG--VECEA--GQPLVNYREAVRRRAEFDHLHKKQSGGSGQYAKVVGYVEPHPEG------KFEFVNEIVGTAIPPEYFPSCQKGSEEAMAKGPLTGNPVQGCRVVLTDGQAHDVDSSDLAFRLAMQGALKAA 634
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: D7FYU3_ECTSI (Elongation factor G, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYU3_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 6.440e-211 Identity = 340/614 (55.37%), Postives = 429/614 (69.87%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMIL----LNYMWQKKNQQ*SS*ELQFVRQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQ------ITNFSKA----------MEVH*RG-SYSTC*S***IW*NDYIWYGRITFRNLC*TY--ET*I*C*MYYWQSISCI*RNCITKS-NFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKG---VEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQA 1764
RNIGISAHIDSGKTTLTERIL+YTGRI++IHDVRGKDGVGAKMDSMDLEREKGITIQSAAT+C+W +HINIIDTPGHVDFT+EVERALRVLDGA+LV+CGVSG+QSQ+LTVDRQMKRY+VPRVAFINKLDR GAN R ++ MR QL+L A VQLPIGLE H GV+DL+ A F G KG ++ + + +P ++K+ V+ ++L+ +M L ++ ++ + R T++ KFVPVFMGSAYKNKGVQLLLDGV DYLP P+E+ N LD +N+E V ++C P +P ALAFKLEE +FGQLTY+R+YQG+I KG +++N SGKK+KVPRLVRMHS+EM DV++ +AGDVVA+FG+DCSSMDTFTDG +M SMFVP PVMSL++ PK ++ FSKA + VH S T S + + L Y ET + R ITK F YLHKKQ+GGSGQ+A+V+G++EP+ +E V+FEF N+ +G+NIP E+I S EKGA+ A KG L G+P+ GVRVV+ DGQ HTVDS+DMAF+ A +R++
Sbjct: 55 RNIGISAHIDSGKTTLTERILYYTGRINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCEWDNHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRVAFINKLDRAGANPQR-VINDMRSQLKLNTAAVQLPIGLEDGHAGVVDLVCGRAFQFSGVKGENVEE----IAVPESMKDDVVAGRALLVEMMADLDEDVAELFLMEEEVDDATLKAAMRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVPNFALDTTNDEKKVLVECCPDSPTLALAFKLEEGKFGQLTYMRLYQGSISKGDMLFNLNSGKKLKVPRLVRMHSSEMQDVDTVAAGDVVAMFGVDCSSMDTFTDGRTQLAMTSMFVPEPVMSLAITPKKSKKGGGSDTADKFSKAFARFTKEDPTLRVHTDDDSKQTIVS------GMGELHLEVYVERLRREYDVETTV-------GQPQVNYRETITKKVPFHYLHKKQTGGSGQFARVMGFVEPIPDETRDDNNDPVQFEFQNRTVGSNIPPEYISSVEKGAKEAMEKGALIGHPVQGVRVVLEDGQTHTVDSSDMAFRFAALMAVRES 650
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A836CCY0_9STRA (Elongation factor G, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCY0_9STRA) HSP 1 Score: 612 bits (1579), Expect = 3.730e-209 Identity = 338/610 (55.41%), Postives = 420/610 (68.85%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMILLNYMWQ----KKNQQ*SS*ELQFVRQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDG-----------QQITNFSKAMEVH*--RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVE---FEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQAAKE 1773
RNIGISAHIDSGKTTLTERILFYTGRI AIHDVRG+DGVGAKMDSM+LEREKGITIQSAAT+C WG H+NIIDTPGHVDFT+EVERALRVLDGA+LV+CGVSG+QSQ+LTVDRQMKRY VPR+AFINKLDR+G++ + D +R QL+L AA VQ+PIGLE H+GV+D+I A YF G KG + + +P ++K L+ + + + + +++ + RQTIAQKFVPVFMGSAYKN+GVQ LLDGV DYLP+P E+ N LD + +E+ V+L CDP P ALAFKLEE +FGQLTY+RVYQG I +G ++N K+GKK+KVPRLVRMHSNEM +V SA AGDVVA+FG+DC+SMDTFTDGT +M SMFVP PVMSL++KP G Q+ T + VH + + Y+ + + C + Y ++IS +++F +LHKKQ+GGSGQYA+VIGYIEPLEE + E FEF N VIGTNIP E+IPSC KG KG + G + G+RVV+TDGQAH VDS+D+AF+ A +R A K+
Sbjct: 5 RNIGISAHIDSGKTTLTERILFYTGRIKAIHDVRGRDGVGAKMDSMELEREKGITIQSAATFCSWGDAHVNIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYGVPRLAFINKLDRVGSSPRKVIAD-LRNQLKLNAAAVQVPIGLEAAHDGVVDVIRGVAYYFRGEKGEMVEEAP----VPEDLKAAAAAARQELVERVADVDEEVAELFICEEDVPKDLLKRAIRRQTIAQKFVPVFMGSAYKNRGVQPLLDGVVDYLPSPAEVPNFALDTAADEARVALSCDPDKPTVALAFKLEECKFGQLTYMRVYQGRIERGHFLHNLKTGKKIKVPRLVRMHSNEMEEVTSAGAGDVVAMFGVDCASMDTFTDGTTQLAMSSMFVPEPVMSLAIKPDAGPKSQASFAKALQRFTKEDPTLRVHTDVNSKEIIISGMGELHLDVYVERLKREYAVECQVGRPSV----NYRETIS-------RRADFNHLHKKQTGGSGQYARVIGYIEPLEEGAVNAAGEPITFEFVNDVIGTNIPPEYIPSCGKGFADGTNKGGMIGAQVQGMRVVLTDGQAHAVDSSDLAFRTAAAAALRGAMKD 598
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A090M9N1_OSTTA (Elongation factor G, mitochondrial n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M9N1_OSTTA) HSP 1 Score: 606 bits (1563), Expect = 5.680e-206 Identity = 330/605 (54.55%), Postives = 418/605 (69.09%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMIL------LNYMWQKKNQQ*SS*ELQFVRQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAME----------VH*--RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQA 1764
RNIGISAHIDSGKTTLTERILFYTGRID+IH+VRGKDGVGAKMDSM+LEREKGITIQSAATYCQW + INIIDTPGHVDFT+EVERALRVLDGAILV+C V G+QSQ++TVDRQM+RY VPR+ F+NK DR GAN + L +R++L+L AA VQ+PIGLE H+GV+DL+ +AV F GS G + ++P N+K + VL+ + + L M ++ ++ ++ R T++ +F P+FMGSAYKN+GVQLLLDGV DYLP P E+ N LD+ NNE V + DPSAPL LAFKLEE RFGQLTY+R+YQG I KGM + NT SGKK+KVPRLVRMHS++M DV SASAGD+VA+FG+DC S DTFTDGTVN +M SM VP PVMSL+V PK NFSKA++ VH + + + Y+ R ++ C + + Y ++I+ +++F+YLHKKQSGG GQY KV+GYIEPL+E + F+N ++G I FI + EKG + A G L GYP+ G+RVV+TDGQ+H VDS+++AF+LA RQA
Sbjct: 77 RNIGISAHIDSGKTTLTERILFYTGRIDSIHEVRGKDGVGAKMDSMELEREKGITIQSAATYCQWKDSPINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYGVPRLCFVNKCDRAGANPWK-VLSQVREKLKLNAAAVQIPIGLEDQHDGVVDLVRMKAVTFSGSNGETLT----WADVPDNLKELAKEKRKVLIESVAEVDEELGDLFLMGEQPTEEQLKAAIR--RATVSNQFAPLFMGSAYKNRGVQLLLDGVTDYLPNPSEVKNIALDLKNNEEPVVVADDPSAPLVGLAFKLEEGRFGQLTYLRIYQGKIEKGMTITNTSSGKKLKVPRLVRMHSDDMEDVSSASAGDIVALFGVDCKSGDTFTDGTVNLAMTSMRVPEPVMSLAVSPKSKSDGGNFSKALQRFQKEDPTFRVHMDEESGQTIISGMGELHLDIYVERMRREYKVDCEVGQPRV----NYREAIT-------KRADFDYLHKKQSGGQGQYGKVVGYIEPLQEST-----DVIFENGIVGNAIAPSFIQAVEKGFKEAAQTGGLLGYPVEGIRVVLTDGQSHAVDSSELAFKLAALAAFRQA 658
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A7S4QBF3_9STRA (Elongation factor G, mitochondrial n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QBF3_9STRA) HSP 1 Score: 597 bits (1540), Expect = 5.890e-203 Identity = 326/608 (53.62%), Postives = 416/608 (68.42%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMIL------LNYMWQKKNQQ*SS*ELQFVRQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAM------------EVH*RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEE-ELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQAAK 1770
RNIGISAHIDSGKTTLTERIL+YTGRI++IHDVRGKDGVGAKMDSMDLEREKGITIQSAAT+CQW HINIIDTPGHVDFT+EVERALRVLDG ILV+CGVSG+QSQ+LTVDRQMKRYNVPR AF+NKLDR G+N + +D +R QL+L AA VQ+PIGLE +HEG++D++ ++A+ F G +G + + + IP +K +V L++ + + L M ++ Q ++ RQT+ FVPVFMGSA+KNKGVQ LLDGV DYLP P E N LD S E V + PL ALAFKLEE+ FGQLTY+R+YQG ++KG + N GKK+K+ R+VRMHS++M ++ A AG+VVA+FG+DC SMDTF+DG +N++M SMFVP PVMSL+VKP + + NFSKA+ +V + + YI + + C T + + Y ++I+ TK F++LHKKQ+GGSGQYAKV+G+IEPL E E ++ G EFDN+ GTNIP E+ SCEKG A +G L G + GVRVV+ DG +H VDS+DMAF++ M IR K
Sbjct: 30 RNIGISAHIDSGKTTLTERILYYTGRINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCQWKDAHINIIDTPGHVDFTIEVERALRVLDGGILVLCGVSGVQSQSLTVDRQMKRYNVPRAAFVNKLDRQGSNPWK-VIDDLRNQLKLNAAAVQIPIGLESEHEGIVDILEQKAIRFKGDRGEVLEEV---MEIPDELKELVEEKREELISRLADVDDDIAELFLMEEEPTVQDLKDAIR--RQTLTCSFVPVFMGSAFKNKGVQPLLDGVLDYLPEPHEKANFALDRSKGEQEVQVTASSDDPLLALAFKLEETPFGQLTYMRIYQGMLKKGNHITNVNDGKKIKLARIVRMHSDDMEEITEAGAGEVVAMFGIDCKSMDTFSDGDMNFAMSSMFVPEPVMSLAVKPANTKMQNNFSKAITKFTKEDPTLRVKVDSETKETVLSGMGELHLEVYIERMKREYEVECVTGQPKV----NYKETIN-------TKQPFDWLHKKQTGGSGQYAKVMGFIEPLSEAERLELGKSNEFDNRCTGTNIPPEYYTSCEKGMNDAMVEGSLVGSEVEGVRVVLQDGASHAVDSSDMAFRICMANAIRDTMK 620
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A7R9XTD9_9CHLO (Elongation factor G, mitochondrial n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XTD9_9CHLO) HSP 1 Score: 595 bits (1534), Expect = 2.710e-202 Identity = 325/603 (53.90%), Postives = 416/603 (68.99%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMIL---LNYMWQKKNQQ*SS*ELQFVRQ-TIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAME----------VH*--RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQA 1764
RNIGISAHIDSGKTTLTERILFYTGRI+AIH+VRGKDGVGAKMDSM+LEREKGITIQSAATYC+W ++ INIIDTPGHVDFT+EVERALRVLDGA+LV+C V G+QSQ++TVDRQM+RYNVPR+ F+NK DR GAN + L +R +L+L AA VQ+PIGLE +HEGV+DL+ ++V F G G + IP N+K + VL+ + + L ++ + + L +R+ TIA F P+FMGSAYKN+GVQLLLDGV DYLPAP E+ N LD+ N E+ V L DPS PL +LAFKLEE +FGQLTY+RVYQG I KGM + NT +GKK+KVPRLVRMHS++M DV SA GD+VA+FG++C S DTFTDG+VNY+M SM VP+PVMSL+V PK + NFSKA++ VH + + + Y+ R ++ C + + Y ++I+ ++ F+YLHKKQSGG GQY KV+GYIEPLE E F+N +IG I FI + EKG + A G L GYP+ G+++V+TDG +H VDS+++AF+LA RQ+
Sbjct: 26 RNIGISAHIDSGKTTLTERILFYTGRINAIHEVRGKDGVGAKMDSMELEREKGITIQSAATYCRWKESDINIIDTPGHVDFTIEVERALRVLDGAVLVLCSVGGVQSQSITVDRQMRRYNVPRLCFVNKCDRAGANPWK-VLAQVRDKLKLNAAAVQIPIGLEDEHEGVVDLVRMQSVVFSGENGQTLTVGE----IPANLKELADEKRKVLIECVSEVDEELGDLFLMGEEPTTEQLLAAIRRATIANTFSPLFMGSAYKNRGVQLLLDGVVDYLPAPSEVQNVALDLKNEEAPVVLSNDPSKPLVSLAFKLEEGKFGQLTYLRVYQGQIDKGMTIVNTSTGKKLKVPRLVRMHSDDMEDVNSAPNGDIVALFGVECKSGDTFTDGSVNYAMTSMKVPDPVMSLAVSPKSKAESGNFSKALQRFQKEDPTFRVHMDEESGQTIISGMGELHLDIYVERMRREYKVDCEVGQPRV----NYREAIT-------KRAEFDYLHKKQSGGQGQYGKVVGYIEPLENTT-----EVIFENGIIGNAIAPSFIQAVEKGFKEAALNGGLVGYPVEGIKIVLTDGASHAVDSSELAFKLAALAAFRQS 607
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A7S0WDM9_9CHLO (Elongation factor G, mitochondrial n=3 Tax=Ostreococcus TaxID=70447 RepID=A0A7S0WDM9_9CHLO) HSP 1 Score: 594 bits (1532), Expect = 6.400e-202 Identity = 321/603 (53.23%), Postives = 415/603 (68.82%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMILLNYMWQKKNQQ*SS*ELQFV----RQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDGTVNYSMVSMFVPNPVMSLSVKPKDGQQITNFSKAMEVH*R------------GSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQA 1764
RNIGISAHIDSGKTTLTERILFYTGRI+AIH+VRGKDGVGAKMDSM+LEREKGITIQSAAT+C+W ++ INIIDTPGHVDFT+EVERALRVLDGAILV+C V G+QSQ++TVDRQM+RYNVPR+ F+NK DR GAN + L +R +L+L AA VQ+PIGLE HEGV+DL+ ++V F G+ G DI +P N+K + VL+ + + + QF+ R TIA +F P+FMGSAYKN+GVQLLLDGV DYLPAP ++ N LD++ E+ + L D APL ALAFKLEE +FGQLTY+RVYQG I KGM + NT +GKK+KVPRLVRMHS++M DV SA +GD+VA+FG++C S DTFTDGTVNY+M SM +P+PVMSL++ PK + NFSKA++ R + + + + Y+ R ++ C + + Y ++I+ ++ F+YLHKKQSGG GQY KV+GYIEPLE+ E F+N ++G I FI + EKG + A G L GYP+ GV++V+TDG +H VDS+++AF+LA RQ+
Sbjct: 31 RNIGISAHIDSGKTTLTERILFYTGRINAIHEVRGKDGVGAKMDSMELEREKGITIQSAATFCRWKESDINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYNVPRLCFVNKCDRAGANPWK-VLSQVRDKLKLNAAAVQIPIGLEDQHEGVVDLVRMQSVVFSGANGQDITIGE----VPENLKKLAEEKRKVLIECVAEVDEELGDLFLVGEEPTTEQFIAAIRRATIANEFSPLFMGSAYKNRGVQLLLDGVVDYLPAPSQVKNVALDLAKEEAPLVLSNDLKAPLVALAFKLEEGKFGQLTYLRVYQGQIEKGMTITNTSTGKKLKVPRLVRMHSDDMEDVTSAPSGDIVALFGVECKSGDTFTDGTVNYAMTSMKIPDPVMSLAITPKSKGETANFSKALQRFQREDPTFRVHLDEESAQTIISGMGELHLDIYVERMRREYKVDCDVGQPRV----NYREAIT-------KRAEFDYLHKKQSGGQGQYGKVVGYIEPLEDST-----EVIFENGIVGNAIAPSFIQAVEKGFKEAALSGGLVGYPVEGVKIVLTDGASHAVDSSELAFKLAALAAFRQS 612
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Match: A0A6S8TQ05_9STRA (Elongation factor G, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8TQ05_9STRA) HSP 1 Score: 592 bits (1527), Expect = 6.540e-201 Identity = 324/615 (52.68%), Postives = 427/615 (69.43%), Query Frame = 1
Query: 4 RNIGISAHIDSGKTTLTERILFYTGRIDAIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCQWGKNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFINKLDRMGANLIRYALDGMRQQLRLGAAFVQLPIGLEGDHEGVIDLITREAVYFLGSKGLDIRDKRFHLNIPINVKNIVLN*SSVLLTLMMIL---LNYMWQKKNQQ*SS*ELQFV-RQTIAQKFVPVFMGSAYKNKGVQLLLDGVNDYLPAPMEITNSC-LDVSNNESVVSLKCDPSAPLTALAFKLEESRFGQLTYIRVYQGTIRKGMIVYNTKSGKKVKVPRLVRMHSNEMIDVESASAGDVVAVFGMDCSSMDTFTDG-----TVNYSMVSMFVPNPVMSLSVKPKDG-------------QQITNFSKAMEVH*--RGSYSTC*S***IW*NDYIWYGRITFRNLC*TYET*I*C*MYYWQSISCI*RNCITKSNFEYLHKKQSGGSGQYAKVIGYIEPLEEELIQKGVEFEFDNQVIGTNIPTEFIPSCEKGARAACAKGVLAGYPLTGVRVVITDGQAHTVDSNDMAFQLAMQYGIRQAAKE 1773
RNIGISAHIDSGKTTLTERIL+YTGRI+ IHDVRGKDGVGAKMDSMDLEREKGITIQSAAT+C W +NHINIIDTPGHVDFT+EVERALRVLDG +LV+CGVSG+QSQ+LTVDRQMKRY+VPRVAF+NKLDR GAN + +D +R+Q+ L A VQ+PIGL +HEGV+DL+ R A F G KG ++ + ++P ++ + V + L+ + + L ++ + ++ +S + R T A++FVPVFMGSA+KNKGVQ LLDGV YLPAP C LD+ N+E+ V ++CD APL ALAFKLEESRFGQLTY+R+YQGT++KG + N ++ + KVPR+VRMH+++M +++ ASAGDVVA+FG++C+SMD+F G + +M SM+VP PV+SL+V PK G Q+ T + VH + + + Y+ + ++ E + Y ++I+ K+ F+YLHKKQ+GGSGQYAK+IGYIEP+EEE FEF N+ +GTN+P+EFIPS EKG R A AKG L G+P+ G+RVV+ DG AH VDS+D AF+ A Y +++A E
Sbjct: 37 RNIGISAHIDSGKTTLTERILYYTGRINNIHDVRGKDGVGAKMDSMDLEREKGITIQSAATHCSWNENHINIIDTPGHVDFTIEVERALRVLDGGVLVLCGVSGVQSQSLTVDRQMKRYDVPRVAFVNKLDRAGANPDK-VVDQLREQMALHACAVQMPIGLSENHEGVVDLVKRVAYTFKGVKGEEVEET----DVPASLVDEVEERRNTLIEAVADVDDALAELYLEGDEIDASVLTDAIGRATKAREFVPVFMGSAFKNKGVQPLLDGVVSYLPAPTAREGVCALDLENDEAPVPIECDSDAPLLALAFKLEESRFGQLTYVRIYQGTLKKGDYIQNVRTRSRTKVPRVVRMHADDMEEIDEASAGDVVAIFGVECASMDSFVSGEKRGESSRLAMASMYVPRPVISLAVAPKKGAPPNVVDAFGNALQRFTREDPTLRVHVDNESKQTIISGMGELHLDVYVERMKREYKVEVEVGEPQV----NYREAIT-------RKATFDYLHKKQTGGSGQYAKIIGYIEPIEEET------FEFVNECVGTNVPSEFIPSVEKGCRDAIAKGDLVGFPVEGLRVVLQDGAAHAVDSSDQAFRAAALYAVKRAIGE 629 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1514.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1514.1.1 >prot_P-littoralis_Contig1514.1.1 ID=prot_P-littoralis_Contig1514.1.1|Name=mRNA_P-littoralis_Contig1514.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=171bp MGSAYKNKGVQLLLDGVNDYLPAPMEITNSCLDVSNNESVVSLKCDPSAPback to top mRNA from alignment at P-littoralis_Contig1514:7281..9417- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1514.1.1 ID=mRNA_P-littoralis_Contig1514.1.1|Name=mRNA_P-littoralis_Contig1514.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2137bp|location=Sequence derived from alignment at P-littoralis_Contig1514:7281..9417- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1514:7281..9417- >mRNA_P-littoralis_Contig1514.1.1 ID=mRNA_P-littoralis_Contig1514.1.1|Name=mRNA_P-littoralis_Contig1514.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=513bp|location=Sequence derived from alignment at P-littoralis_Contig1514:7281..9417- (Pylaiella littoralis U1_48)back to top |