prot_P-littoralis_Contig1511.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1511.2.1
Unique Nameprot_P-littoralis_Contig1511.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length186
Homology
BLAST of mRNA_P-littoralis_Contig1511.2.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.550e-95
Identity = 160/186 (86.02%), Postives = 164/186 (88.17%), Query Frame = 0
Query:    1 MGTTDSYTSFTIRVPDESLRCRLVRGRRYRAGTPGGVSRQIFRRHLAALHQVLAEINPPPEPPVCRWTNKSVVFGAVYLAAAIACALAYGFTIAFAVFVATSIWAAVASLLFPVDHARAEAVSVDEPPITCLEVDRYFMGGRRRAPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRG 186
            MGTTDSYTSFTIRVPDESLRCRLVRGRRYRAGTPGGV RQIFRRHLAALHQVLAEI+PPPEPPVCRW NKSVV GAVYLAAA+              FVATSIWAAVASLLFPVDHARA+AV VD+PPIT LE DRYFMGGR R PCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRG
Sbjct:  251 MGTTDSYTSFTIRVPDESLRCRLVRGRRYRAGTPGGVRRQIFRRHLAALHQVLAEIDPPPEPPVCRWANKSVVVGAVYLAAAVXXXXXXXXXXXXXXFVATSIWAAVASLLFPVDHARAQAVGVDKPPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRG 436          
BLAST of mRNA_P-littoralis_Contig1511.2.1 vs. uniprot
Match: A0A6H5K8U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U3_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 3.670e-95
Identity = 155/186 (83.33%), Postives = 163/186 (87.63%), Query Frame = 0
Query:    1 MGTTDSYTSFTIRVPDESLRCRLVRGRRYRAGTPGGVSRQIFRRHLAALHQVLAEINPPPEPPVCRWTNKSVVFGAVYLAAAIACALAYGFTIAFAVFVATSIWAAVASLLFPVDHARAEAVSVDEPPITCLEVDRYFMGGRRRAPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRG 186
            MGTTDSY SFTIRVPDESLRCRLVRGRRYRAG PGGVSRQIFRRHLAALHQVLAEI+PP   PVCRWTNK+V+ GA+Y AAAIA A+ YGF  A A FVAT IWAAVASL+FPVDH R+EAV VD+P IT LE DRYFMG R R PCRKTRRRHGRR GNRGYLKKVSAYHAEPSSGRPGLWSVRG
Sbjct:  325 MGTTDSYASFTIRVPDESLRCRLVRGRRYRAGLPGGVSRQIFRRHLAALHQVLAEIDPPRVSPVCRWTNKTVMVGAMYPAAAIASAVGYGF--ATAAFVATCIWAAVASLMFPVDHTRSEAVGVDKPLITRLEADRYFMGDRHRVPCRKTRRRHGRR-GNRGYLKKVSAYHAEPSSGRPGLWSVRG 507          
BLAST of mRNA_P-littoralis_Contig1511.2.1 vs. uniprot
Match: A0A6H5KZG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.060e-29
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 0
Query:    6 SYTSFTIRVPDESLRCRLVRGRRYRAGTPGGVSRQIFRRHLAALHQVLAEINPPPEPPVCRWTNKSVVFGAVYLAAAIACALAYGFTIAFAVFVATSIWAAVASLL 111
            +YT F   +P ES RCRL+RGRRYRAGT  G+SRQ  RR  A++ Q+LA  +PPPEPP CRWTNKSVV GAVY+ + +A AL+ GF IA  +FV+  IWAAV   L
Sbjct:  310 AYTGFAPGLPGESRRCRLIRGRRYRAGTSSGLSRQALRRTAASVRQILAMRHPPPEPPACRWTNKSVVLGAVYITSVMAPALSCGFAIAPIIFVSMLIWAAVGFFL 415          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1511.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE1.550e-9586.02PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K8U3_9PHAE3.670e-9583.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZG6_9PHAE1.060e-2959.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1511contigP-littoralis_Contig1511:13353..13910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1511.2.1mRNA_P-littoralis_Contig1511.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1511 13286..13910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1511.2.1 ID=prot_P-littoralis_Contig1511.2.1|Name=mRNA_P-littoralis_Contig1511.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=186bp
MGTTDSYTSFTIRVPDESLRCRLVRGRRYRAGTPGGVSRQIFRRHLAALH
QVLAEINPPPEPPVCRWTNKSVVFGAVYLAAAIACALAYGFTIAFAVFVA
TSIWAAVASLLFPVDHARAEAVSVDEPPITCLEVDRYFMGGRRRAPCRKT
RRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRG
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