prot_P-littoralis_Contig151.69.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig151.69.1
Unique Nameprot_P-littoralis_Contig151.69.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
BLAST of mRNA_P-littoralis_Contig151.69.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.660e-31
Identity = 62/121 (51.24%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    3 WEYKGRTQAGVDVDWISENQIMKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAATALSRKAALQLYPIHTHVQKDFGSGLTLNGQVFDYKDRYWRVRYTDNNWEEVPRTELKRLLR 123
            WEYKG++  GV  DW+ E  + +  SFTPLQLD F+ALWHLY P +  +  A    +  T LSR  AL ++PI    QK+   G+ L GQV+DY   YWRVRYTD NWEE+ R EL+RL R
Sbjct: 1764 WEYKGKSGNGVVSDWLPEETMRR--SFTPLQLDCFVALWHLYFPQLA-NASAPDSVKPRTPLSRAQALHVFPIGFTFQKELAGGILLQGQVYDYVSPYWRVRYTDGNWEELSRRELERLAR 1881          
BLAST of mRNA_P-littoralis_Contig151.69.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 6.460e-31
Identity = 61/123 (49.59%), Postives = 83/123 (67.48%), Query Frame = 0
Query:    3 WEYKGRTQAGVDVDWISENQIMKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDP----RAATALSRKAALQLYPIHTHVQKDFGSGLTLNGQVFDYKDRYWRVRYTDNNWEEVPRTELKRL 121
            WEY+G+  +G   DW+SE+ +++  SFTPLQLDGF+ALWHLYHP     ++AN  P    +    LSR  AL+L+PI   ++K+   G+ L GQVFD+   YWRV Y+D NWEE+ R EL+RL
Sbjct:  758 WEYRGKLGSGAVSDWLSEDVMLR--SFTPLQLDGFVALWHLYHP-----QQANDLPPVSVKPRAPLSRAEALKLFPIDFTLRKELDGGVNLQGQVFDFLQPYWRVGYSDQNWEELARRELERL 873          
BLAST of mRNA_P-littoralis_Contig151.69.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.170e-18
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 0
Query:    2 SWEYKGRTQAGVDVDWISENQIMKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAAT-----ALSRKAALQLYPIHTHVQK---DFGSGLTLN-GQVFDYKDRYWRVRYTDNNWEEVPRTELK 119
            +WEY+G+ Q G    W++E+ +    SF+PLQLD F ALW  YH     S+ A   P A T       +R+AALQ +P++T V K   D    + L+ G+V D+ D YWRV ++D +WEE  R EL+
Sbjct: 1565 AWEYRGKYQDGTTSSWLTEDTVKD--SFSPLQLDVFHALWEDYHG----SDVAPRPPGAPTRGEREVATREAALQEFPLNTEVAKELRDKDDNIILSRGKVCDFYDPYWRVEFSDGDWEEFTRRELR 1685          
BLAST of mRNA_P-littoralis_Contig151.69.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 7.130e-17
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 0
Query:    2 SWEYKGRTQAGVDVDWISENQIMKAKSFTPLQLDGFIALWHLYH-PNITPSEEANHDPRAATALSRKAALQLYPIHTHVQKDF----GSGLTLNGQVFDYKDRYWRVRYTDNNWEEVPRTELK 119
            +WEYKG+ Q G   DW++E+ +    SF+PLQL  F AL   YH  ++ P              +R+AAL+ +P+ T V ++     G+ +   G+V D+ D YWRV+++D++WEE+ R EL+
Sbjct: 2110 AWEYKGKYQEGTPSDWLTEDTVKD--SFSPLQLGIFHALCEDYHGTDVAPRPPGALSRGEHEVATREAALKEFPLDTEVARELLDSDGNVVVSRGKVCDFYDPYWRVKFSDDDWEELTRRELR 2230          
BLAST of mRNA_P-littoralis_Contig151.69.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   80 QKDFGSGLTLNGQVFDYKDRYWRVRYTDNNWEEVPRTELKRLL 122
            QKDFG G  L GQVF ++DRYWRVRY++ NWEE+ R EL+R L
Sbjct: 1084 QKDFGGGQKLQGQVFGHRDRYWRVRYSNQNWEELTRQELERCL 1126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE2.660e-3151.24RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JMP6_9PHAE6.460e-3149.59Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNP4_9PHAE3.170e-1840.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3V4_9PHAE7.130e-1736.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBF4_9PHAE1.100e-1065.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig151contigP-littoralis_Contig151:369192..369566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig151.69.1mRNA_P-littoralis_Contig151.69.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig151 369162..369905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig151.69.1 ID=prot_P-littoralis_Contig151.69.1|Name=mRNA_P-littoralis_Contig151.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MSWEYKGRTQAGVDVDWISENQIMKAKSFTPLQLDGFIALWHLYHPNITP
SEEANHDPRAATALSRKAALQLYPIHTHVQKDFGSGLTLNGQVFDYKDRY
WRVRYTDNNWEEVPRTELKRLLRA*
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