mRNA_P-littoralis_Contig151.64.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 226 bits (576), Expect = 4.900e-72 Identity = 110/141 (78.01%), Postives = 120/141 (85.11%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSS----------SVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLR 393
RRRLDRYCT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSS S+L FRD+F KAN GK+P+WVVTSPPYKGAVGFVKAALAVATKG ALKLPLSFLEPCADRGGWL + PPAVC+FLR
Sbjct: 123 RRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLR 263
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 189 bits (480), Expect = 1.480e-58 Identity = 91/145 (62.76%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSSVLP---------------FRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFL 390
RR LDRYCTSPEAV+AL AV + GCVLDMCGGP DA+A R G TC+V+TND+S+ + P F DFL A G+RP+WV+TSPPYKGA+ +VK+AL++A KG ALKLPLSFLEPCADRGGWL PPAVCVF
Sbjct: 77 RRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 182 bits (461), Expect = 6.100e-56 Identity = 90/141 (63.83%), Postives = 103/141 (73.05%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSS----------SVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLR 393
RR LDRYCTSPEA+DA AV I+GCVLDMCGGP DAVA R TCE+LTNDVSS S+ F +DFL A SGKRPEWV TSPPY A+ FVKAA+++ATKG K+ + FLEPCAD GGWL PP++CVFLR
Sbjct: 24 RRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLR 164
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.980e-55 Identity = 87/140 (62.14%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSSVLP----------FRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFL 390
RR +DRYCTSP ++AL V+ISGCVLDMCGG +DAVA R TC+VLTNDV + P F DDFL A+ G++P+W+VTSPPYKGA+ FVKAAL VA KG ALKLPLSFLEPCADR GWL PPA+C+ +
Sbjct: 65 RRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMM 204
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.480e-47 Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSSVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEP 333
RRRLDRYCTSP AVDALR AVAI+GCVLDMCGGPEDAVAQ FGGTC ++ +S++ F D+F+K N GK+P+WVVTSPPYKG+VGFV AALAVATKG ALKL L P
Sbjct: 42 RRRLDRYCTSPAAVDALRAAVAITGCVLDMCGGPEDAVAQGFGGTC----TNLDASLVYFPDEFIKDNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNP 148
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.950e-46 Identity = 87/147 (59.18%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSS----------------SVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLR 393
RR LDRYCTS AV+AL DAV +SG VLDMCGGP+DAVA++ TCEV+TNDVSS S F +FL ++PE VV SPPYKGAV FVKAAL VA G ALK LSFLEPC DR WL PP VCVFLR
Sbjct: 113 RRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLR 259
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 153 bits (386), Expect = 1.830e-45 Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 88 MCGGPEDAVAQRFGGTCEVLTNDVSSSVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLR 393
MCGGPEDAVA FGGTCEVLTNDVSS + P A+ GK+P+WVVTSPPYKGAVGFVKA LAVA KG AL+LPLSF +PCADRG WL + PP +C FLR
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSP-------AHPGKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLR 95
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 150 bits (379), Expect = 3.490e-44 Identity = 73/112 (65.18%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 88 MCGGPEDAVAQRFGGTCEVLTNDVSS----------SVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLR 393
MCGGP DAVA R TCE+LTNDVSS S+ F +DFL A SGKRPEWVVTSPPY A+ FVKAA+++ATKG A K+P+ FLEPCADRGGWL PP+VCVFLR
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLR 112
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 142 bits (359), Expect = 3.780e-40 Identity = 72/115 (62.61%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSS----------SVLPFRDDFLKANSGKRPEWVVTSPPYKGAVGFVKAALAVATKGAALKLP 315
RR LDRYCTSPEAV+AL AV+I+GC+LD+CGGP DAVA R G TCEVLTNDVSS S+ F DDF A+SGKRP+WVVTSP YK A+ FVKAA+++AT+G + P
Sbjct: 90 RRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAP 204
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 131 bits (329), Expect = 1.280e-36 Identity = 66/91 (72.53%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSS----------SVLPFRDDFLKANSGKRPEWVVTSPP 243
RRRLDRYCTSP AVDALRDAV I GCVLDMCGGPE AVA FGGTCEVLTNDV S S+L F DFLKA+ GK+P+WVVTSPP
Sbjct: 57 RRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQPDWVVTSPP 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig151.64.1 >prot_P-littoralis_Contig151.64.1 ID=prot_P-littoralis_Contig151.64.1|Name=mRNA_P-littoralis_Contig151.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp RRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTback to top mRNA from alignment at P-littoralis_Contig151:341188..341751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig151.64.1 ID=mRNA_P-littoralis_Contig151.64.1|Name=mRNA_P-littoralis_Contig151.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=564bp|location=Sequence derived from alignment at P-littoralis_Contig151:341188..341751- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig151:341188..341751- >mRNA_P-littoralis_Contig151.64.1 ID=mRNA_P-littoralis_Contig151.64.1|Name=mRNA_P-littoralis_Contig151.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=393bp|location=Sequence derived from alignment at P-littoralis_Contig151:341188..341751- (Pylaiella littoralis U1_48)back to top |