mRNA_P-littoralis_Contig151.48.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig151.48.1 vs. uniprot
Match: D8LMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV8_ECTSI) HSP 1 Score: 1245 bits (3221), Expect = 0.000e+0 Identity = 878/1811 (48.48%), Postives = 1015/1811 (56.05%), Query Frame = 1
Query: 2683 MAHVDLEISATSVPNPTPSTT--------TTPDCPTPSFLQLKCGAPLVVQYRFNYATASPEGDWLGIIAWGDKPTAATCIVRRPLLESSAGTVLFEEGPALPGRYAVYAFLTESNNAVVGSSAAFECVGTFDADGARRARCAREFTLYLSTRWDMTLERAAFKAVVAPTLKKMLDARGVSFGYMDPRSDLGVEDLKTPKGVDAILDGIRRCRPYLVCCLGELNDVELGAESVTASILQETPWLKNILQPAGSSXXXXXXXXXXXXXXXNHYLKPAAALLTVTDLEVVSAFLLPVLQETIQAERGSDT------ARLAGVPGGASRHAWIVGALADFRRMASQYEGHMDGDQSGRGGATGDRA-DRTQSPGLVTQGSVVPRRGFMTEHAFFYTRAACLRSELHPSQKLGGGGITGVIRFINGSKRRMTQLKQEIAASTSRFRQGYQDETVLLSMVLEDLSGAIDTMYPLHTAPDMLDDTALFPHASARNLLDHAVVKLPVIRYKGFRPDPPPVTGATAVVAPGVVTAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWRIQQRLEFIQFEERVRRVSDDAQGESGGXXXXXXXXXXXXXXXXXAAQGXXXXAHDATGAATVQGGAGCVGDNHGIGTSXXXXXVGXATASSGVAHGTTSVTTPPPAGVATAKRLVTVLAEYLEDKTNIGMVIVDQPGTGMTTAVLGFLDWYCRGETAGGRQGVAVVESLDCIPQYGRCNLSRAVITRPRLVAHDLNDGGLVHATVKRQTLVLRIDCRDPCHGRLDNARLVHYLSCEIIRTFGMPFNMPDRPGLSSRL-----------------------DA----------------------------------------------GIASDP-SIHDHDHGHNDEDGGVDTQDLCSPAGGDDLAIAAPTPVETTKTTTATTCGGSSI--GREGGRVKVGPEVLGRWLDILHGYGDLVLVIENPEALISPGEHATTPPDQPSNPLTWLLPELPPHVKVVMTCHQGSPCQQLLTGPEGWGWHLLRRKTGLDAETKGQVIDAVLRRHGAGCMLDWVETDLILKEKTTNIQFLVGVTEAICCGGLLERSGLPPGLHRGAAIIGPRPASPSFVSPVTASCEPARAAANAHPVLATGPVSINRSGDASGGGEG------------MSDTDVVELRGAATSLASTPFMNQESALGVARLRIRQLVSINGRRGSLLRAALCLVRLSHGGLSPYELSAALRHLLESYKSQRPHHQKQTTSPASAAPYAGSVAGRNTTNNGPGYNHSDSNIG--------------------------SSQAPPQTATVILTGESLPSPPAASRGXXXXXXXXXXXXXXXXXXXXXXGAPEATAAGTTGVAAASADFTREEG-DLPAPVLPSGKTGNSVTPAAAATGAPSSPTEAEGAPSMRTTTRG---------------------------RAGGGVASPVTTKPSAERVTNRAITGAADGANGYDRVSRPAFAEHDWRALEPDLMQFCQKALGRLVLRDYTTKMAVDQELIHHPPGLPDKFVVLADSFAKDLPGIRRAEEQLAALAAIVVLSTNSGGEVPRRASRPYREKLFAALADVELLYAMNDSKRGDPQAYLEYMNLAHVFSAPRRFAAAVRSTFEEYYDVVSHGSMAPHGRKHHHH----ARGGGTHGLLYTINGIRHSASAAPAPAATSAGGPNRQGGRGGLCXXXXXXXGSGGVDSLSEASKVLAAHRGRKPLPPPPLARAGVLRLIEAARLALERLGEADETMNLAESAWALMFG 7644
MA VDL+I A P PT +TT TT + PTP FL+L CGAP V YRFNY+TA P GDWLG+IAWGD+PTA TCIVRRP LESS+GTV FEEGP LPG+YAV+AFLTESNNAV GS+A FEC+ F A+ AR +R REFTLYLSTRWDM LERAAF+ AP LK+MLDARGV+FG++D RSDL VEDL TP+GVDA+LDGIRRC PY VCCLGELNDVELGAESV ASILQ PWLK +L S ++ AAA+LTVTDLEV+S FLLPVLQETIQAE GS T ARLA VPGGA+RH+ IV ALADFRR+ SQ D+ G G + A D P G C + +H T+L S+ Y DLS AID +YP+HTAPD LD +LFPHASARNLL+ AVVKLPV+RY+GFRP+P VTG + +PG+ + + XXXXXXXXXXXXXXXX AWR+QQRLEFI FEERV+R+S +AQG GG XXXXXXXXXXXXX AA A G G G +GT+ X T PA AKRL VLA+YL DKT IGMV+VDQPGTG+TTA+LGFL+WYCRG+ AGGR+GV VVESLD IPQYGRCNLSRAVI+RPRLV+ +LNDGGL TV+R+TLV+R+DCRDPCHGRLD A LV+YLSCEIIRTFGMP+ MPD+PGLSSR DA GI S+ S + +H H+D++ VD QD + AAP+ ++ T A G+EGGR ++GPEVL RW D+L G+GDLVLVIENP+AL++P E A P+Q NPL WL PELPPHVKV+ TC GS CQQLL G EGWGWH+LRRK GLDA+TKGQVIDAVLR+HG GCMLDWVE+DL+LKEKT NIQFLVGVTEA+C G L RSGLPPGLH AA G RPASPS VS A+C + SG + G+G +SD DV LRGAA S+ M++ESA+GVARLRIRQLVSI G RGSLLRAALCLVRLSH GLS ELSAALRH+LE YKSQR H K A AGS G S++ PP + T + SP + S G+PE T ASAD T++ D P P SVT R G G A+ + +T ++ A +R RPAF + DWRALEPDLMQFC K LGR VLRD+ T AVD E + DKFVVLADSFAKDLPG+RRAEEQLAALAAIVVLST+ G E PRRASRP+REKLF ALADVELLYAMN SK STFEEYY+VVSH +M HGR H H AR TH LLYT++G++H +A RQ G XXXXXXX L RAG LRL+EAA+L LERLG+A+ETMNLAESAWALMFG
Sbjct: 1 MARVDLKIVAGVSPPPTTATTASNLKLGATTSNSPTPGFLRLTCGAPFEVAYRFNYSTAVPTGDWLGVIAWGDEPTAGTCIVRRPFLESSSGTVFFEEGPPLPGKYAVHAFLTESNNAVAGSTAMFECISGFGAEEARCSRNGREFTLYLSTRWDMMLERAAFRDAAAPALKQMLDARGVTFGFIDARSDLDVEDLTTPRGVDAVLDGIRRCCPYFVCCLGELNDVELGAESVNASILQGNPWLKRVL--LSDSPALTNSSDREKKLVRAGRMRAAAAMLTVTDLEVLSGFLLPVLQETIQAESGSCTTAGVTRARLAAVPGGAARHSCIVNALADFRRLVSQQ------DREGGDGHDEEVAGDGNGKPVAADAGH------------------GCSEARIHDG----------------------TRLLLHSCRVPSQRAPPYPKN---------DLSRAIDRLYPMHTAPDRLDYVSLFPHASARNLLNAAVVKLPVVRYRGFRPEPSAVTGGV-LASPGLAVSPAASTAXXXXXXXXXXXXXXXX----------AWRLQQRLEFIPFEERVKRMSGEAQG--GGDISXXXXXXXXXXXXXTAA---------AVRVDLSLGSDGRRGTARSLGTTPAETGXXXXXXXXXXXXXXXXXT---PA--VAAKRLAVVLADYLGDKTTIGMVVVDQPGTGLTTALLGFLEWYCRGQVAGGRKGVTVVESLDRIPQYGRCNLSRAVISRPRLVSRNLNDGGLADETVERRTLVVRVDCRDPCHGRLDKAHLVNYLSCEIIRTFGMPYKMPDKPGLSSRYRIYNCRLDMFIFNLYGTYQWRRGDATNVGTLELRCRALWVERAAVRERTHWKELKPLALGNGGHHEGKKVHGIVSEQTSDNPREHNHDDDEAAVDPQDQLA------ADTAAPSGTKSGGGTMAVXXXXXXXKGGKEGGRTEIGPEVLRRWFDVLRGHGDLVLVIENPDALVTPEERAAASPEQVPNPLAWLPPELPPHVKVITTCSTGSSCQQLLCGAEGWGWHMLRRKAGLDADTKGQVIDAVLRKHGVGCMLDWVESDLVLKEKTANIQFLVGVTEALCYSGKLARSGLPPGLHT-AASAGSRPASPSSVSSA-AACR-------------------SNSGSCTSAGKGENCDGXXXXXXXLSDADVASLRGAAASM-----MHEESAIGVARLRIRQLVSIKGHRGSLLRAALCLVRLSHAGLSVLELSAALRHILERYKSQRHQHHKPPPYTNVTASAAGSGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAREPPAREAAVATPTTRQSPASTS--------------------PQATGSPE-----TPPNPGASADTTKDRNNDSGLPDAPR----KSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKGAAA----------LGEHGLTSSSPRA---ERTQRPAFGQQDWRALEPDLMQFCHKVLGRFVLRDFVTVTAVDLECLE----TRDKFVVLADSFAKDLPGVRRAEEQLAALAAIVVLSTHGGVEAPRRASRPHREKLFTALADVELLYAMNGSK----------------------------STFEEYYNVVSHKAMGFHGRNHREHYQHQARAAATHDLLYTVHGLKHPVAA-------------RQPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-----TRAGALRLLEAAKLVLERLGDAEETMNLAESAWALMFG 1603
BLAST of mRNA_P-littoralis_Contig151.48.1 vs. uniprot
Match: D8LMV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV9_ECTSI) HSP 1 Score: 354 bits (909), Expect = 1.440e-106 Identity = 216/342 (63.16%), Postives = 241/342 (70.47%), Query Frame = 1
Query: 919 VASKSGINLLDRFDDSMVDYLSAEVLLQQAFSIRSLAFGVDHPRARASAMRLLQVYDAQQGGREQEAAELRADPQAHLQTVHLRIAELERAVGTFRTESSAPSPAKGKGGGTSGV--------------DSAEIEQRLVGLFKEKWAGAAAERQELQSNGQQTCRKHEFQKENALDKNEQSKTKVSRGGVLADSET---QTPEQEVSAPPEGAXXXXXXSKAVRK-TALEEA-QVWHTTARHDPEGLLITSVSPSD-GFSSEEAVRRATDSLKRQDYFLAARSCMGSLEQDVRNPAAIQVLLETFRHISSFPKKEDFRADVEVSLGPSTSGVLGERFTVRYS 1884
+ SKSGINLLDRFDDSMVDYLSAEVLLQQAFSIRS FGVDHP+ARAS M LLQVYDAQ GGR+ EA ELRADP AHL+TV+LRIAELERA+ TF+TE GGG D+A++E RL LFKEKWA AAAER +Q RK EFQ AL++++ K K +RGG+ D Q E +S G + A TA EA VWHTTAR DPEGL T +S S+ GF+SEEAVRRATDSLKRQDYFLAARSCMGSLEQDVRNP AIQVL E+FR ISSFPKKEDFRADVEV+LGP+ SGVLGERFTVRYS
Sbjct: 1 MGSKSGINLLDRFDDSMVDYLSAEVLLQQAFSIRSATFGVDHPKARASGMLLLQVYDAQNGGRQDEAKELRADPHAHLRTVNLRIAELERAIETFKTE----------GGGAFXXXXXXXXXXXXXXXEDAADVELRLANLFKEKWALAAAER------ARQRIRKREFQTFAALEEDKGVKEKATRGGLHTDMNAYGVQAEEGYLSGGGPGMVSDWEMTNAATAMTAGSEAPHVWHTTARIDPEGLSATLLSASNTGFNSEEAVRRATDSLKRQDYFLAARSCMGSLEQDVRNPVAIQVLQESFRQISSFPKKEDFRADVEVALGPAASGVLGERFTVRYS 326
BLAST of mRNA_P-littoralis_Contig151.48.1 vs. uniprot
Match: D8LMV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV7_ECTSI) HSP 1 Score: 327 bits (837), Expect = 7.510e-96 Identity = 206/387 (53.23%), Postives = 244/387 (63.05%), Query Frame = 1
Query: 7723 RLLAGVYVSRGLDMHLLLFHEAAQTDSXXXXXXXXXXXXXSGYTGDTDNDNATIGTSSSLSVTKARLKGAGTTLASSTSKAGEDDRRGDAAAAQRNRCGPHDGVHVGSRSTRLSMAVDAVKPSKESSXXXXXXXXXXXXXXXXXXSRDGRGMTA---TASTTGKNGRFATAGQVQEYRAVLKSAAAHASKMKVAHANRELNLEGAIRGHDVDAAVLNKSINPGKQSKQQIGRVARAREAVDSMLKRWPLVIERMSICAEQAVKIRNLVKAAGTFPAGGXXXXXXPAASASPWTGDCSTLDTRACEKLRAAKYHTRLMEQHSEILILSTRFERVALAIQRRQEEREYHRLAALGLVPPGMTMSDFRDQNRSTSS----------FEDH 8844
R+LAGVYVSRG DMHLLLFHEAAQT+S S Y+ ++ + AG+++ G A + G +G R SMAV+A S S DG G ++ A+ TGK GRFATAG+++E+RA+LK AAAHASKMK AHANREL++EGA+RGHDVDAAVLNKS NPG+Q+KQQIGRVARAREAVD ML RWPLVIERM IC EQA+KIRNLVK AGTFP GG A+A+ G ST DTRACE+ RAAK H R++EQH+EIL LS RFERVA AIQRRQEEREYHRLAALGLVPPG+++S+FRDQ RST++ FEDH
Sbjct: 32 RILAGVYVSRGFDMHLLLFHEAAQTESRSDDS--------SSYSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTRSGNAGQENGVGGAGTQSKTELGVSGTTGMGQRH---SMAVEATGVS-----------GLKVRCDASSSSLDGSGGSSRRTAATVTGKTGRFATAGRLREFRAMLKGAAAHASKMKTAHANRELSIEGAVRGHDVDAAVLNKSTNPGRQTKQQIGRVARAREAVDGMLTRWPLVIERMGICTEQAIKIRNLVKTAGTFPTGGLAAENTEPAAATA-AGSSSTNDTRACERRRAAKEHARVVEQHAEILTLSQRFERVASAIQRRQEEREYHRLAALGLVPPGVSISEFRDQLRSTTTTAAMTRAPSFFEDH 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig151.48.1 >prot_P-littoralis_Contig151.48.1 ID=prot_P-littoralis_Contig151.48.1|Name=mRNA_P-littoralis_Contig151.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2952bp KWIALNRSPSHRIERVLGNSRHGDNVTGRPQSAQSSFHPRDGIKPRHLNHback to top mRNA from alignment at P-littoralis_Contig151:210377..238985- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig151.48.1 ID=mRNA_P-littoralis_Contig151.48.1|Name=mRNA_P-littoralis_Contig151.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=28609bp|location=Sequence derived from alignment at P-littoralis_Contig151:210377..238985- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig151:210377..238985- >mRNA_P-littoralis_Contig151.48.1 ID=mRNA_P-littoralis_Contig151.48.1|Name=mRNA_P-littoralis_Contig151.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=8856bp|location=Sequence derived from alignment at P-littoralis_Contig151:210377..238985- (Pylaiella littoralis U1_48)back to top |