prot_P-littoralis_Contig151.43.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig151.43.2
Unique Nameprot_P-littoralis_Contig151.43.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length175
Homology
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BLAST of mRNA_P-littoralis_Contig151.43.2 vs. uniprot
Match: D8LMW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW5_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 4.200e-24
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0 
Query:   78 TTKHAGRVAPLYGIKRKVKVEMEENYSGKVVEPAGAETSMFGSDANALFDVIEKNKRKA 136
            + K A R+APL+GIKRKVKVEMEEN+SGKVVEPAGA TSMFGSDANALFDVIEKNK+KA
Sbjct:   57 SAKRAERLAPLHGIKRKVKVEMEENFSGKVVEPAGAATSMFGSDANALFDVIEKNKKKA 115
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.43.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMW5_ECTSI4.200e-2484.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig151contigP-littoralis_Contig151:186099..193934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig151.43.2mRNA_P-littoralis_Contig151.43.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig151 185556..194369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig151.43.2 ID=prot_P-littoralis_Contig151.43.2|Name=mRNA_P-littoralis_Contig151.43.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=175bp
MTSPLPRASLGSCRRRCRRSSSSSSNGTFLAFAVMVLGSALLVALMLCTT
QASAFLLSPPPSSSSTSSSSSPARSATTTKHAGRVAPLYGIKRKVKVEME
ENYSGKVVEPAGAETSMFGSDANALFDVIEKNKRKAEEAAAAADAAALAA
DGDSDDDEVGGVDGNGEAVGGGEA*
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