mRNA_P-littoralis_Contig1.71.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig1.71.1
Unique Name	mRNA_P-littoralis_Contig1.71.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: D8LDH4_ECTSI (HIG1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDH4_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.830e-63
Identity = 102/121 (84.30%), Postives = 108/121 (89.26%), Query Frame = 1

Query:    1 MVVMDERAPSFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYMAGPPELQRQTPESKMEAISKQTNRWSGAGVPPTAQAEAAAIKGGQK 363
            MV MDERAPSFFEK AVK KKEPLVPIGA+ATVGFLVSGIYSFKQGNK++SQKLMRGRV AQGFTILVMTAG YMAGPPE+ RQT E KMEAISKQTNRWSG   PPTAQAEA AI+ G+K
Sbjct:    1 MVTMDERAPSFFEKLAVKGKKEPLVPIGALATVGFLVSGIYSFKQGNKQLSQKLMRGRVVAQGFTILVMTAGFYMAGPPEMTRQTVEGKMEAISKQTNRWSGV-PPPTAQAEAVAIEDGRK 120

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: A0A7S3MGH7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGH7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.100e-18
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 1

Query:   28 SFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYMAGPPELQRQTPESKMEAI 279
            SF EK   K K +PLVP+GA+ T+GFLVSG  +F+ G K+ SQ LMRGRVAAQ FTI  M  G Y    P  +  T E KME +
Sbjct:   38 SFGEKAWRKTKDQPLVPLGALLTLGFLVSGFKAFRNGEKQKSQVLMRGRVAAQFFTIAAMGVGAYFGMKPHDRPATMEEKMERM 121

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: UPI0006D4DAF6 (HIG1 domain family member 2A, mitochondrial n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4DAF6)

HSP 1 Score: 76.6 bits (187), Expect = 8.920e-16
Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 1

Query:   37 EKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYM 225
            EK   K K+ PLVPIGA+AT G L  G+YSF++G ++MSQ +MR RVAAQGFT+L +  GL +
Sbjct:   37 EKLIRKFKENPLVPIGALATTGCLSYGLYSFRRGERRMSQMMMRARVAAQGFTVLAIVGGLLL 99

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: A0A4D9D8E5_9STRA (HIG1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8E5_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.460e-15
Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 1

Query:   28 SFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLY 222
            +F+ +   K KK+PL+PIG  AT+G L +G+Y+FK G K +SQ++MR RV AQGFTI+V+ AG +
Sbjct:    4 TFWSRLWDKTKKDPLIPIGCTATLGCLGAGLYAFKSGEKHLSQRMMRARVLAQGFTIVVLMAGSF 68

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: UPI001A99B208 (HIG1 domain family member 2A, mitochondrial n=1 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A99B208)

HSP 1 Score: 76.3 bits (186), Expect = 1.550e-15
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1

Query:   28 SFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYMA 228
            +F EK   K K+ P VPIG +AT G L+ G+ SF+QG  K SQ LMRGR+AAQGFT++ +  G++ A
Sbjct:   41 TFKEKLIRKTKQNPFVPIGCLATAGALIYGLRSFQQGKTKQSQMLMRGRIAAQGFTVVALVVGVFAA 107

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: B3N0S9_DROAN (HIG1 domain-containing protein n=3 Tax=ananassae subgroup TaxID=32347 RepID=B3N0S9_DROAN)

HSP 1 Score: 75.9 bits (185), Expect = 1.650e-15
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1

Query:   37 EKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYM 225
            EK   K K+ PLVPIG +AT   L +G+Y+F+ GN+KMSQ +MR R+AAQGFT+L +  G+ M
Sbjct:   34 EKLQRKIKENPLVPIGCLATTAALTAGLYNFRTGNRKMSQLMMRSRIAAQGFTVLALIVGVVM 96

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: J9JUV4_ACYPI (HIG1 domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9JUV4_ACYPI)

HSP 1 Score: 76.3 bits (186), Expect = 1.860e-15
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 1

Query:   40 KFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYMAGPPELQRQTPESKMEA 276
            KF  K K+ PLVPIGA+ TVGFL  G+ S   GN+  SQ +MRGR+AAQGFT++ +  GL+  G   L+    ++  EA
Sbjct:   39 KFLRKFKENPLVPIGALVTVGFLSVGLKSMYDGNRVRSQMMMRGRIAAQGFTVIAILGGLFYQGMTALKETEDDTPHEA 117

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: T1ICY2_RHOPR (HIG1 domain-containing protein (Fragment) n=2 Tax=Rhodnius TaxID=13248 RepID=T1ICY2_RHOPR)

HSP 1 Score: 75.9 bits (185), Expect = 2.200e-15
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1

Query:   16 ERAPSFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYMA 228
            E   S  EK   K K+ P VPIGA+ TVG L  G+YSF++G ++MSQ +MR R+ AQGFT+L +  G+ MA
Sbjct:   33 ENTESGQEKLWRKVKENPFVPIGALVTVGCLSFGLYSFRKGERRMSQMMMRARIVAQGFTVLALVGGITMA 103

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: A0A034V133_BACDO (HIG1 domain family member 2A, mitochondrial n=5 Tax=Tephritidae TaxID=7211 RepID=A0A034V133_BACDO)

HSP 1 Score: 75.5 bits (184), Expect = 2.220e-15
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 1

Query:   37 EKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGLYM 225
            EK   K K+ P VPIG +AT G L  G+YSF+ GN++MSQ +MR R+AAQGFT+L + AG+ M
Sbjct:   32 EKMMRKIKENPAVPIGCLATAGALSYGLYSFRNGNRRMSQIMMRTRIAAQGFTVLALVAGVVM 94

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BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Match: UPI001B3AC646 (HIG1 domain family member 2A, mitochondrial n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3AC646)

HSP 1 Score: 75.5 bits (184), Expect = 3.030e-15
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 1

Query:   28 SFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKMSQKLMRGRVAAQGFTILVMTAGL 219
            +F EKF  K K+ P VPIG +AT G L+ G+ SF+QG  K SQ LMRGR+AAQGFTI+ +  G+
Sbjct:   41 TFKEKFIRKTKENPFVPIGCLATAGALIFGLRSFQQGKTKQSQILMRGRIAAQGFTIVALLVGV 104

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDH4_ECTSI	1.830e-63	84.30	HIG1 domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A7S3MGH7_9STRA	4.100e-18	53.57	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
UPI0006D4DAF6	8.920e-16	57.14	HIG1 domain family member 2A, mitochondrial n=1 Ta...	[more]
A0A4D9D8E5_9STRA	1.460e-15	52.31	HIG1 domain-containing protein n=1 Tax=Nannochloro...	[more]
UPI001A99B208	1.550e-15	52.24	HIG1 domain family member 2A, mitochondrial n=1 Ta...	[more]
B3N0S9_DROAN	1.650e-15	53.97	HIG1 domain-containing protein n=3 Tax=ananassae s...	[more]
J9JUV4_ACYPI	1.860e-15	48.10	HIG1 domain-containing protein n=1 Tax=Acyrthosiph...	[more]
T1ICY2_RHOPR	2.200e-15	50.70	HIG1 domain-containing protein (Fragment) n=2 Tax=...	[more]
A0A034V133_BACDO	2.220e-15	55.56	HIG1 domain family member 2A, mitochondrial n=5 Ta...	[more]
UPI001B3AC646	3.030e-15	56.25	HIG1 domain family member 2A, mitochondrial n=1 Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1	contig	P-littoralis_Contig1:420539..426943 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LDH4
Preferred name	HIGD1B
PFAMs	HIG_1_N
Model size	366
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
GOs	GO:0001666,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0007154,GO:0007610,GO:0008150,GO:0008152,GO:0008535,GO:0009056,GO:0009057,GO:0009267,GO:0009605,GO:0009628,GO:0009636,GO:0009889,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010562,GO:0010604,GO:0010639,GO:0010646,GO:0010648,GO:0010821,GO:0010823,GO:0010941,GO:0016020,GO:0016021,GO:0016043,GO:0016567,GO:0016740,GO:0017004,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019787,GO:0019866,GO:0019941,GO:0022607,GO:0023051,GO:0023057,GO:0030163,GO:0030534,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031325,GO:0031326,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032592,GO:0032991,GO:0033043,GO:0033108,GO:0033554,GO:0033617,GO:0033674,GO:0034622,GO:0036211,GO:0036293,GO:0036294,GO:0042149,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042592,GO:0042594,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043549,GO:0043618,GO:0043620,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045471,GO:0045859,GO:0045860,GO:0045937,GO:0046677,GO:0048149,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051338,GO:0051347,GO:0051603,GO:0051716,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0060255,GO:0060548,GO:0061418,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070647,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0090199,GO:0090201,GO:0097249,GO:0097250,GO:0097305,GO:0098573,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1903506,GO:2000112,GO:2001141,GO:2001233,GO:2001234
Exons	3
Evalue	2.99e-64
EggNOG OGs	KOG4431@1\|root,KOG4431@2759\|Eukaryota
Ec32 ortholog description	Hypoxia induced protein, domain
Ec32 ortholog	Ec-15_000600.1
Description	mitochondrial respiratory chain supercomplex assembly
Cds size	366
COG category	O

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789312.199918-CDS-P-littoralis_Contig1:420538..420653	1680789312.199918-CDS-P-littoralis_Contig1:420538..420653	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 420539..420653 +
1680789312.2137873-CDS-P-littoralis_Contig1:425153..425278	1680789312.2137873-CDS-P-littoralis_Contig1:425153..425278	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 425154..425278 +
1680789312.2223096-CDS-P-littoralis_Contig1:426817..426943	1680789312.2223096-CDS-P-littoralis_Contig1:426817..426943	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 426818..426943 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1.71.1	prot_P-littoralis_Contig1.71.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig1 420539..426943 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig1:420539..426943+
coding sequence from alignment at P-littoralis_Contig1:420539..426943+

protein sequence of mRNA_P-littoralis_Contig1.71.1

>prot_P-littoralis_Contig1.71.1 ID=prot_P-littoralis_Contig1.71.1|Name=mRNA_P-littoralis_Contig1.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp
MVVMDERAPSFFEKFAVKAKKEPLVPIGAIATVGFLVSGIYSFKQGNKKM
SQKLMRGRVAAQGFTILVMTAGLYMAGPPELQRQTPESKMEAISKQTNRW
SGAGVPPTAQAEAAAIKGGQK*

mRNA from alignment at P-littoralis_Contig1:420539..426943+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig1.71.1 ID=mRNA_P-littoralis_Contig1.71.1|Name=mRNA_P-littoralis_Contig1.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6405bp|location=Sequence derived from alignment at P-littoralis_Contig1:420539..426943+ (Pylaiella littoralis U1_48)
ATGGTGGTCATGGACGAGCGAGCACCGTCTTTCTTCGAGAAGTTCGCTGT
GAAGGCGAAAAAGGAGCCTCTTGTGCCGATCGGAGCCATAGCGACTGTCG
GGTTCTTGGTGTCAGGTATGACGTGTGCTGTGTCAGACCCGTTGTTTCAA
GAGCATCACAGCATGACTTCTTCGTTGTCGAGGATACATCATACGTATTG
ACAGCAGTACTGCGGTGTACTGGTGTGTTGTGTGCTCACGAGGACTGTCA
TCTAACACCACTTGTGCATTCGGTAACGGAGGCAAACATTTTGCTGCTGT
GCGAAGACGTGGCTTGACGAAACTATATGTACGCCAAAAGAGACTTGGTG
GACCAACACGCAGGCAGTCTCATTATACGAAGTACTTCGTACTTCGTATG
GTACTTCGTACTTCGTATACATAACTCCATCATCATACCTTTCCTGACTG
CATACATATGACGTGGCAAATACTCCAGTGTGTGTGTGTGTGTGTTGTCA
TCCCTTTCATTGGACGCCACTCTACACCTTGCGGGTAGGTAGACGCTCCA
ACCGGGTCACACAGGGGGAAGTCAACACTGGAATTTTTTTTTTTTTTCTC
CACTTTCCTCTGCGGTGCTTGCCTTTTTAGTTGAGCTTTTATCGCGAGAA
AGGGGATAGCGATCCCTTTCCCTCGTCGATGGTACGATCGAATTTTGTTT
ACTCACGAATTGATCGCTTTCCACTTTCACGCGCAATGTGAGAAAAAGCC
CCAGATCGTGTTACTGCACTGGGATTCGAACTCACGCGTGTATGTCAGAA
GGTCGCGTGGATAACCAACTGAACCACCGGGGCGACCGGGTGGCGTCCGG
TACAAACGGAATACTGCAGTGTTCGACAGTCACTCCTACGAAGTACTCCG
GAGTATTTACAAGTACCTACAACAGCGTGTGACAATCTGAATTACGGAAG
ATACGATCGATAGGGATGACACATACTCGGAAGTACCTACACAGTAGGTT
CTACTCCTGAATCATGATACATAGTTCAATTCTTTCATGATATAATATGT
TGAACAGATGACTTGGCGACTTTCGGGAACTCTCGTATGTAGGGTTTGCT
ACTCGTGCCTGTATCGGCGATGCTACTTGCACTCCTCCTTCTGCTGCGCA
AGTACTAAAGGTACTGCTGAACACAGCAGTAATATCGTGATGCTCTTACC
ATGGCGATGGCAACAGCTGCGTACCACAGATCATGGGGGAGAGGGACGAG
TATGTACTCGTCAGCACAGACATCCCACTGGTGTGCGGTAGGTCTCACTA
CTGTCGACCGCACCCCTAGTCCGAGTTTTTCCGAGCGTGACGTGCAAGTA
AGAGTTTCCCCCCCCTTCCTCTCTCTCATGAAATTGCTTTATCACATCTG
TCGACACTCTTAAAAAATACTCCGGAGTATGACAGCAGTGAACAACAGAC
AGTTAGGGTTCATCCTCACGGTACCCTGATGTGCAGCACTCTCTCTTACA
GCAGCAGTTCGACCCCGTCTTGGACACTCGGTCTCTCGCTTTGAATCTGC
CATGTACTTCGTATGTTATTAGTGATTCGCATATAATATCATACCCGTAC
ACACCATGTGATTCAGCTGTATGATACTTCGAAGTACCTCGTATTATACG
AAGTACATACCTGTGTGACCCCAGTTGGAGCGTCGAACTACCCGAAAGGT
GCAGAGTGGCGCCCAATTAAAGTCATGACAACACACACACATACATGCAC
AGTACGGAATAATTTTCACACATCGCCTTATATTTCACTGGGTCGAGGTT
TGGAATCTCAATCTTGACATCTCGAAGCAAGCGTTTCAGTGATGTCTGTG
TTGAGAGGGTTGTGGCCTCGGAAAAATATCAAGGGGAGCTAGCTTCCCGA
AACGTTTAGATTCGAGCTACTGCTGTCGAGCACAGCAGCAATGATACTTC
ACCTGGTGACGGTTACGTAACCCTTCCATATCTAGTACCACCTCCAGGCA
GTTTCACGGTATTCGCCTCTCACAGCGGCGTCGGCAGCAGCAGCAGGTGT
GTTGTTGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGATTATCACATCAGCTCACCAC
CGCCGCAGTCGAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGAAG
GAAAATAAAATAAAAAAGAAATAAATGAAGAAATGATGGGTCACCTTATC
AAAATCAGATTTAGTACGTACCGTTGGGGTACCATCTGTGGTGGCCACAA
GTACAAAATACAGAAAAAAACAGACTCGTGTGTGTGTGTGTGTGTGTGTG
TGTGTTCATCCCGTTTATTCTGGGCAGCAGTCTACACCTTTTCGGTGTGA
AGTGGGTGCACCAGCCGTGGTCACACAGGAGGAAGGTCACACACGAGCTT
TGTTGTTTTTTATTTTGTTTTGTTTCCCAAACCTTCCTCCTGCGGTCCGT
GCCTTTGGTTTTTAATGCGAGTCGGGTACAGCAATCCCTTCCCTCTCTTA
ACGCACGAGTGATCGGCTTTCAACTGTGAACTCGCAAGAAACGCTTTAAG
CGAGAATCGAACCCCAAGACTTTACAACTAGCAGGTTACGAGGGAACCAC
TAGACTACCGGGGCGACCGGGAGTAGTGCCCCAAACAATACAACCGTCTT
GGCAAGCTAATCCACCCCTGTTCTGCACAGTCCAGCAGGTGCGGTATGGC
GACGAGTTGGCGAAAAAACGACAGCAGCAGTACTGTACTGAAGTAGTAGA
TATGGGGAGGGATCGGAACCGTTTTATCTCGCCGCTGGTCTGATCCTTTT
TTTGTTGCTCCACCAACTCACACCCTGTTGGCAACCTCTTTTAAGCCAGC
GAACAAGCTGAAGACAATCGCGTGGCGGTAGCGGTTTCGAGGGCCACCAC
CACGTAGACCTCCGTTCCGAGAGAAAAAGGGGTTCCGGGGGTTCGCGGCC
CTGATGCTGTCTGATGCTGTCAAATGGAGCTTGTTACCTCGACAAAAAAA
CACCACCAGCGCGACGTAGAAGCGCCACACAACACACACACACACACACA
CACACACGGATCTTTGCGACCCTCAATCAGCGCGTCACATGATCCACGAC
GGCCGCGTAGCGGCAACTGACCCGAGGGTTACCACACATCGACCTCCGTT
TCGAAAGAATCAGGACGTTGGAGGTCGTCGATCTCTGTTGCTGTCCGCTT
GTGTGTGTGTGAAGTGTGCATTTTGTTTGATTTTACAACGAAAAAGGGGC
GAGGACGGCCAGATACTTCTCGTGATAACAGCAGTAGTAGCAAAACACCT
CGCAGGAGGAGCATGGAATAAAACAAAAAACAAACGATGGACGTGTCCCT
GTCGACAAGATACACCCACAGACACCCCATGCGCCCACAAGCCATCGTAT
GACCTTCACGGAGCTAGCAGTGGAAAGCGACGATGTGACGAGCAAGCGAT
GAGCGACTCGTAACTCAACGAGAGACGAGGACGACCGAATACTTCTCACG
GCACGTGGCAAAGACAGCAAACAACGCGGAACGAACATGGAACACGGCAA
GACACAAATATCAGCCGAAAAACTCGTGTTTTGACCTTCCTCTGTTAGTT
GTTTGTGTATCCTCACACTGCTGCTGGTACTGTAGACTCCCCACATTACC
ATCTTTGTCGTCGTCTACTTCTGTCCCCGTGCGCGGTCAGAAACGTCCGA
AAGGAAAAACGATGCATTTTCTTTTTCCTCTGAAATGAATGTCGGTGTAT
TTTCGGTGTCCCCTAATAAATGTCTGAAGGGATCGGTCCAGTAGATATAT
ACTTCGAAGTATATATTTTTATTTTTAAGAAAATGCCCAATTCTCAACCC
AAATCGATAACGCAGGTTGCTCAGAATGAGCGTTCTTACCGGGAATTGCA
ACGTTGAACACATGAAATGAGCAAGAAGACAACATCCAGCGATGACCTAC
GCGCTGGCACGCTCAGATCTGCTGCTGGGACCGAGATATCGGAGGTCGAA
GTTATGGTTCAGGAACTCCAGAAATTGTCCGCATTTCAGCCAGAAACCGA
ACAACTTCCACTCCCGTACTCGCCGTCATGGGCCCCGCCTTGGGTCTACA
GCAGTAGCTAGTGGTCTACATCAGTAGCTCCTTACCCTAGCTGCTGCTGT
AGACCGGGTATTCAAAGACATGAGACCCGTGGTGACGAGAAAAGCAGTGA
GCATGGACAAGAAGATGTTCGGGATCTGGTTGAGATTCGGACGGTTTCTG
GACTGCCTGAAACATAAACTCGACCTCCAATATCTCGGCCCCAGCAGCAG
ATATGAGCGTGCAAGCCCGCAGGTCACCACTCCATGGTGTCTTCTGCTGA
TTTCATGTGTTAAACGCTGCAATTCCCGGTATGACCGCTTATTCTGAGCA
ACCTGCATTGTCGTCTCGGGTTGGGACTTGGGCAATTTCTTGATAATAAA
AATAAATAATATCGTCTGGACCGATCCCTTAAATGAAAGACCATGTCTTA
TCGGTTTCCTGCTAAATGTCTGAAATGGATGACGACCTCTTTTTTCGGTT
TTCTCTTGAACGCAGGGATTTACTCGTTCAAGCAGGGAAACAAGAAGATG
TCGCAGAAGCTCATGCGAGGTCGAGTGGCCGCCCAAGGGTTCACGATCTT
GGTGATGACGGCTGGACTTTACATGGCGGGCCCCCCAGAGGTTTGTGGAC
GCCTTGGATATCATAAAAATCTCACGCGTCGCCCCCTCGGGAAAATGCCC
ATCTGCTTTTGTGTTTCGTTTTCCACTTGAGGTGATGCTCCAACCCTCCC
GGGAAGCTAGACCCCGAGTATCATAATATGTTGGAATCCTTTTCAAGGCT
GCAAAAAATTGACGATTTGCGCTCGCACATTGATGAGAATGGTATTGCAT
AGGGAAGCAGAGGGCAAGTCCACGACAAGTTCTCTTCGAATACTGCTGTA
CAAGATGCATGCACGCGCCCACACATATTTTGCTGCTCTGCTGGCGGCTT
GTTTTGGTCGCGAGGCAGCCAGGACACTTTTGACTTTTTGGAGATGTCAT
CAACCTCTTTTTTTCTTGCGTGCTGATGGTTCTCCGACGGAAGCTGCGAA
TCAGCGTTATCTTTGCATGTAGCGTGGCGTGCCCGACGACGCCAAACGCT
GCAAGGGCGCTTCGGTCCCGTTAGGGATGTGTTTTTTTCTTGTCCAGTTC
TTGAGGATTATTTTCTGTCCACCTGTGATGGTGCACCGGAACATCCCCGC
CCTCCCTCCCAGAAAACAGCCCGCCTTGCGTGTCGAGTATCTTTAGCAAA
ACACCCACCTCCCCAATCTGTGCGAGATCGCCATTGCCTTCTGGGCTCGC
CCGTATAGGCTAAAATTAGTCAGGTTCGGTCTCACCCCCGCTCCAAAACG
TTGGACTCATTCCCGGGGGGGTGCAACAAAAAATATGGTGGAGTTGGAGG
AAGCACCTACCCTCGAAGCTTCGGAGGAGCTCGAGTGAACGAATCCAATC
AGTCACACTTTTGGCCCTGTGGGGGGGGGGGGTTCGCAGCAACATTTTGG
GGGGGTGGTCGCTGGTCGCAGCAATTATTTGGTGGAGTCGGAAGGGAACA
CCTAGTCTCGAACCCTCGGATTAATGAAGTAATCCAATCAAGTCATACGT
TTGGCCCTGCGGGGGGGGAGGGGGCGCGGATAATACGCTATCGTGGTTGG
TGGGAGGGGAACGGGAGTCGTTAGCGCTGGAAGCATGTCATGTAGCAAGC
ACGTTCCGTAGACCTAGGTTGTTTTTGTCGATGGCGAGTGATGAAGAGAC
TGTCCGCAAGCGAAGCAAATCTATTTCATTCTTGTTTAGTGTGGTCCTGG
ATGAGTGTTGAAAGAGACTGCCCGCAATCAAACCTGTTTCATCCTGATTT
GTTATGTTTTCGGTTCCCGCCATTTCCATTGTTTCATTGCCTGCGACTTC
GAAAGTGGTCTTCTTGTCGTACACCTCCCGGAACGTTCGAAACGCGAAAG
AAGCCACCCTTCAGCAGAGACCACCAACCCTACCGCCACCACCACCACCA
CCCCCACCCACCACAACAACAATACGGACAACAACAAGGCCAACAACAAG
GCCAACAACAATAACAAAAACAACTACAACAACAACAACATCTTTCAAGC
AAACAAATAATCAGAAGGCCCCCTCCTCCCTCCCTCCACACGATTCCCAT
CTCCGATCGCGCGCCCCGTGATCGCGAAGCTGCAGAGACAGACGCCAGAA
AGCAAAATGGAGGCCATCAGCAAGCAGACCAACAGATGGTCCGGCGCAGG
CGTCCCCCCGACCGCTCAGGCCGAGGCGGCGGCGATAAAAGGCGGCCAAA
AGTGA

Coding sequence (CDS) from alignment at P-littoralis_Contig1:420539..426943+

>mRNA_P-littoralis_Contig1.71.1 ID=mRNA_P-littoralis_Contig1.71.1|Name=mRNA_P-littoralis_Contig1.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=366bp|location=Sequence derived from alignment at P-littoralis_Contig1:420539..426943+ (Pylaiella littoralis U1_48)
ATGGTGGTCATGGACGAGCGAGCACCGTCTTTCTTCGAGAAGTTCGCTGT
GAAGGCGAAAAAGGAGCCTCTTGTGCCGATCGGAGCCATAGCGACTGTCG
GGTTCTTGGTGTCAGGGATTTACTCGTTCAAGCAGGGAAACAAGAAGATG
TCGCAGAAGCTCATGCGAGGTCGAGTGGCCGCCCAAGGGTTCACGATCTT
GGTGATGACGGCTGGACTTTACATGGCGGGCCCCCCAGAGCTGCAGAGAC
AGACGCCAGAAAGCAAAATGGAGGCCATCAGCAAGCAGACCAACAGATGG
TCCGGCGCAGGCGTCCCCCCGACCGCTCAGGCCGAGGCGGCGGCGATAAA
AGGCGGCCAAAAGTGA