prot_P-littoralis_Contig151.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig151.28.1
Unique Nameprot_P-littoralis_Contig151.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length112
Homology
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BLAST of mRNA_P-littoralis_Contig151.28.1 vs. uniprot
Match: A0A6H5K4B7_9PHAE (GAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B7_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.350e-11
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    1 MRFTHQDEAVIGAFLSLLGPHIFASSMLQPKRKMHIKV 38
            M FT QD A+IGAFLSLLGP IF SSMLQPKRKMHIKV
Sbjct:  132 MHFTPQDMAIIGAFLSLLGPRIFESSMLQPKRKMHIKV 169
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BLAST of mRNA_P-littoralis_Contig151.28.1 vs. uniprot
Match: D8LMW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW7_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 4.850e-11
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0 
Query:    1 MRFTHQDEAVIGAFLSLLGPHIFASSMLQPKRKMHIKV 38
            M FT QD A+IGAFLSLLGP IFASSMLQPKRKMHIKV
Sbjct:  530 MHFTPQDMAIIGAFLSLLGPRIFASSMLQPKRKMHIKV 567
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4B7_9PHAE3.350e-1184.21GAF domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMW7_ECTSI4.850e-1186.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig151contigP-littoralis_Contig151:154783..155901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig151.28.1mRNA_P-littoralis_Contig151.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig151 154578..155945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig151.28.1 ID=prot_P-littoralis_Contig151.28.1|Name=mRNA_P-littoralis_Contig151.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
MRFTHQDEAVIGAFLSLLGPHIFASSMLQPKRKMHIKVSKVGDDEDLFPE
THGVRMQTRQKSTGNLIHTLNADQSFEEDEENEDDEDYKEVTSLGSSVES
TQKGVDSTDPC*
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