mRNA_P-littoralis_Contig151.21.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A6H5K2C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C6_9PHAE) HSP 1 Score: 382 bits (981), Expect = 2.330e-126 Identity = 198/263 (75.29%), Postives = 215/263 (81.75%), Query Frame = 1
Query: 1 MGTALEDWWVLGRWGLAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSS-------------QLPLILLGAVSGLLGSVLDSLMGAVLQASYFDT 750
MG L WW LGRWG+A+ +ASY+ + GLKKKSLN+SGA+A F VGLVSLGLSLR GL LILFYKSSS+LTKVG RK KLTDDYKEGGQRGA QVLSCSLFAT++A+ H TG GDSLVDFE PL GALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPW+ VPPGTNGGMSL+GTVAS AAGVVMG+GFV GWVFRLSPP + SS QLPL+LLG VSGL GS+LDSLMGAVLQASYFDT
Sbjct: 1 MGIELAQWWPLGRWGVALVIASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRFGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVYHTVVTGAGDSLVDFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASAAAGVVMGAGFVCFGWVFRLSPPSPAGHSSPXXXXXXXXXXXXXQLPLVLLGGVSGLAGSILDSLMGAVLQASYFDT 263
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: D8LMW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW9_ECTSI) HSP 1 Score: 313 bits (801), Expect = 2.710e-100 Identity = 159/196 (81.12%), Postives = 171/196 (87.24%), Query Frame = 1
Query: 1 MGTALEDWWVLGRWGLAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSG 588
MG L WW LGRWG+A LASY+ + GLKKKSLN+SGA+A F VGLVSLGLSLRLGL LILFYKSSS+LTKVG RK KLTDDYKEGGQRGA QVLSCSLFAT++A+ H TG GDSLVDFE PL GALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPW+ VPPGTNGGMSL+GTVASVAAGVVMG+G
Sbjct: 1 MGIELAQWWPLGRWGVASVLASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVHHTVVTGAGDSLVDFESDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASVAAGVVMGAG 196
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A7S2V002_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V002_9STRA) HSP 1 Score: 272 bits (696), Expect = 3.040e-83 Identity = 157/289 (54.33%), Postives = 200/289 (69.20%), Query Frame = 1
Query: 37 RWGLAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSL---VDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLELV--CGRDILTNEQINIVSAIVTSLLAG 888
R GLA+ + Y+ GLKK+SL++SGA A F VGLVSL +S RLGL LILFYKSSS+LTKVG ++K +L D + GQR A QVLSCS A VVA++ ++ G D L V++ P LLCAYLG YACC GDTWSSELGVLS++PP LIT+PWR VP GTNGG+S +GT+A+ AAGVV+G+GF+L GW+ + Q LI G + GLLGS+LDSLMGA LQA+Y+D K I K V G ++V CG DILTNEQ+N++S +VT++ +G
Sbjct: 12 RCGLALAASLYLVFSGLKKRSLSRSGACAAFFVGLVSLSISARLGLTLILFYKSSSILTKVGQKKKAQLDDHHVTDGQRTATQVLSCSGIACVVAVIMYYLEGE-DMLAMGVNYSSHPTTSFLLCAYLGHYACCNGDTWSSELGVLSRSPPILITQPWRTVPAGTNGGVSTMGTLAAGAAGVVIGAGFLLFGWM-------QGAPQDGQYLLIPFGGMCGLLGSMLDSLMGATLQATYYDREKKCITSK-----VEGKSSDVVRVCGYDILTNEQVNLLSVLVTTIGSG 287
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A7S2RII1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RII1_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.130e-70 Identity = 141/280 (50.36%), Postives = 181/280 (64.64%), Query Frame = 1
Query: 46 LAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLELVCGRDILTNEQINIVSAIVTSLLA 885
+A +A +G GL+KKSL+ SGA A VG +S S R GL+LI FY+SSS LTK RK++L YKEGGQR A QV SCSL ATV+A+V F T D VD P+ ALLCAYLG YACC GDTW+SELG L PRL+ PWR VP GTNGGMS LGT AS+A G+ +G FV+ G P S + SQLPLI LGA G +GS++DS +GA LQA+++ ++IV PS+ + ++ + G DIL+NEQ+N +S +T+ L+
Sbjct: 8 VAAAVAGLLGWRGLRKKSLSPSGAAAAVLVGFLSFLASFRFGLVLIAFYQSSSSLTKFQGERKRRLEAGYKEGGQRDAEQVFSCSLLATVMAVV-FLLTQGEDQPVDSAAAPMRSALLCAYLGHYACCNGDTWASELGTLDSGLPRLVLAPWRKVPKGTNGGMSFLGTAASLAGGLFIGLVFVVCG-------PHSSPGAPSQLPLIALGAAGGFVGSLIDSFLGATLQATFYHREKRIIV--PSSAS-DNADVDRITGVDILSNEQVNALSVAITTALS 276
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: K8YV45_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YV45_NANGC) HSP 1 Score: 231 bits (589), Expect = 4.810e-67 Identity = 128/291 (43.99%), Postives = 192/291 (65.98%), Query Frame = 1
Query: 46 LAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWR-AVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLP----LILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLE---LVCGRDILTNEQINIVSAIVTSLLAGLL 894
+A A+ + GL+K SL+KSGA+A + VG +S+G SLR G ++ILFY+SSS+LT+ K L +D+K+GGQR A QVL+CS T++A+ F G D ++FE PL LLCAY+G YACC GDTW+SE+G+LS + PRL+T +R VP GTNGGMSL GT+AS+A G ++G+G +LG+V + D +S + P + ++GA G +GS+ DS++G + QA+++ K +V+ P+A G G E L+ G D+L+NE +N++S +++ LA +L
Sbjct: 33 MATIFATTLSYRGLRKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMP---DDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVL 320
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A5D6XQ07_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ07_9STRA) HSP 1 Score: 224 bits (572), Expect = 4.670e-65 Identity = 139/286 (48.60%), Postives = 181/286 (63.29%), Query Frame = 1
Query: 37 RWGLAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLELVCGRDILTNEQINIVSAIVTSLLAGLL 894
R G+A+ LA+ +G GL+K+SL+ SGA+A F VG SL R G++L+ FY S S LTKV + K+KL +YK GGQR A QVL+CS AT VAL + G D ++F PL LL +Y+G YACC DTW+SELGVLS + PR+IT R VP GTNG +S LG AS G +G L W L S ++Q+ ++LLGAV+GLLGS+LDSL+GA LQA++FD+ I E+ T A V G+D+LTNEQ+N VS + T+L AGLL
Sbjct: 9 RVGVALALAALLGRRGLRKQSLDASGALAAFVVGFFSLASGYRFGVLLLGFYISGSRLTKVRAAAKQKLDANYKVGGQRSARQVLACSALATGVALYYVATFGDQDQPIEFAAAPLRSFLLASYIGHYACCTADTWASELGVLSASAPRMITT-LRVVPAGTNGAVSALGLAASALGGAFIGG----LYWAMSLF------SGTAQVQVVLLGAVTGLLGSLLDSLLGATLQATWFDSERHTICEERHHTTAAATH---VSGKDVLTNEQVNAVSVVATTLAAGLL 280
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A1W0A0M5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0M5_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.940e-64 Identity = 139/290 (47.93%), Postives = 179/290 (61.72%), Query Frame = 1
Query: 43 GLAVG-LASYIGIGGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKP---SAFTVAGGGLELVCGRDILTNEQINIVSAIVTSLLAGLLLG 900
GL VG LA+Y G L+KKSL+KSGAIA F VG S+G R G++L+ FY S S LT RK + KEGGQR A QVL+CSL A +V +++ G D+ +D QP L Y+G YACCA DTW+SELGVLS +PP LITK W VP GTNGG+S +GT+AS A G +G F + G +F S+S Q P I G VSGL GS LDSL+GA +QA+++D K I +P FT VCG D+LTNEQ+N+VS +T++++G L+
Sbjct: 10 GLLVGFLAAYRG---LRKKSLDKSGAIAAFVVGATSMGCGYRFGILLLGFYFSGSKLTTFQENRKAMMDASVKEGGQRSARQVLACSLLACIVCVIYASVVG-DDAQIDPIKQPTATFLWGCYIGHYACCAADTWASELGVLSPSPPVLITKFWIKVPTGTNGGISCVGTLASAAGGAFIGLLFYVYGVIFL------PSTSVPQWPSITFGLVSGLFGSFLDSLLGATIQATWYDDTTKKIAPRPLKTQPFTYRH-----VCGYDVLTNEQVNLVSVALTTIISGYLIN 284
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A7S2U2Q7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U2Q7_9EUKA) HSP 1 Score: 221 bits (564), Expect = 8.560e-64 Identity = 129/269 (47.96%), Postives = 169/269 (62.83%), Query Frame = 1
Query: 82 GLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLELVCGRDILTNEQINIVSAIVTSLLAG 888
G +KKSL+ GA+A VG ++LG++ R GL L+LFY SSS LTK+G K KL + + + QRGA QVLSCS+ V+A+V+ G D VD++ P G LLCAYLGF+ACC GDTW+SELG LSK + VP GTNGG+S LGT AS+A G +G +V++G+ F + + SS Q PL+L G G LGSVLDS MGA LQ S+ K IV+ P +CG +ILTNEQ+N+VSA + +L+AG
Sbjct: 28 GYRKKSLSSGGAVAAMLVGGITLGITWRFGLTLLLFYGSSSQLTKIGKHAKDKLEEGHSKESQRGATQVLSCSMTGVVLAIVYASLVGSDDIPVDYDTNPTGSFLLCAYLGFFACCNGDTWASELGTLSKAKSATLITTLSDVPKGTNGGISFLGTAASIAGGGFIGLVYVVVGF-FTV----EKKSSVPQWPLVLFGMGMGALGSVLDSFMGATLQESWMCRRTKKIVKPPPMKDT----YVKICGMNILTNEQVNLVSASLAALVAG 287
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A3F2RXA6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXA6_9STRA) HSP 1 Score: 219 bits (557), Expect = 5.880e-63 Identity = 131/269 (48.70%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 82 GLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMGSGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLELVCGRDILTNEQINIVSAIVTSLLAG 888
GLKKKSL+ SGAIA VG ++L S R G++L+ FY S S LTKV S K++L +YK GGQR A QVL+CSL AT +A+ F G D +DF LL +Y+G YACCA DTW+SELGVLS++ PRLIT R VPPGTNG +S+LG S G +G L G S S+Q +I LGAV+GL GSV DS++GA +QA+YFD + I ++ + GG +E VCG D+L+NEQ+N+VS +VT+ ++G
Sbjct: 19 GLKKKSLDVSGAIAASFVGFLTLSSSYRFGVLLLGFYFSGSKLTKVRSSVKQQLDANYKPGGQRSAGQVLACSLLATFIAVYTFLQFGDDDVPIDFTAAKAHSYLLASYIGHYACCAADTWASELGVLSQSKPRLITT-LRRVPPGTNGAVSVLGLAVSALGGTFIGV----------LYYAGSLLSGSAQAQVITLGAVTGLFGSVFDSVLGATVQATYFDRASRKICDE----SAVGGDVEHVCGVDLLSNEQVNVVSVLVTTAISG 272
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Match: A0A7S2N4E0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N4E0_9EUKA) HSP 1 Score: 216 bits (551), Expect = 3.680e-62 Identity = 128/278 (46.04%), Postives = 174/278 (62.59%), Query Frame = 1
Query: 79 GGLKKKSLNKSGAIAGFGVGLVSLGLSLRLGLILILFYKSSSVLTKVGSRRKKKLTDDYKEGGQRGAVQVLSCSLFATVVALVHFFFTGVGDSLVDFEFQPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWRAVPPGTNGGMSLLGTVASVAAGVVMG-SGFVLLGWVFRLSPPGDSSSSSSQLPLILLGAVSGLLGSVLDSLMGAVLQASYFDTNLKVIVEKPSAFTVAGGGLELVCGRDILTNEQINIVSAIVTSLLAGLLLGPLL 909
GG K+ SLN+ GA A F V ++ SLR G+ L++FYK+ S+LTKVG+ K KL D Y GQRGA QVL+CS A A+ G + + Q LG L A++ F+ACCAGDT++SELG+LS++PPR++T+PW+ PPGTNGG++ LGT+AS GV MG V LG L PP S+ L +G ++G+ GS+LDSL+GA +QA+Y+D K+IV+K SA T + V G +L+NE +N VS +LLA L PLL
Sbjct: 5 GGYKRGSLNRDGATAAFVVAALAFSCSLRSGMTLLVFYKTGSMLTKVGASVKNKLEDGYAAEGQRGASQVLACSAIAVACAVARRLLVGTDGPIDLADVQCLGNRLTLAFVAFFACCAGDTYASELGILSRSPPRIVTQPWKVAPPGTNGGITALGTLASAGGGVCMGLCHAVFLG---PLLPP----SAHECAALTYVGLLAGVGGSILDSLLGATVQATYYDEERKLIVKKQSAAT------KCVSGFPLLSNEMVNFVSTTAVALLAALAPQPLL 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig151.21.1 >prot_P-littoralis_Contig151.21.1 ID=prot_P-littoralis_Contig151.21.1|Name=mRNA_P-littoralis_Contig151.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp MGTALEDWWVLGRWGLAVGLASYIGIGGLKKKSLNKSGAIAGFGVGLVSLback to top mRNA from alignment at P-littoralis_Contig151:126057..139139+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig151.21.1 ID=mRNA_P-littoralis_Contig151.21.1|Name=mRNA_P-littoralis_Contig151.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13083bp|location=Sequence derived from alignment at P-littoralis_Contig151:126057..139139+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig151:126057..139139+ >mRNA_P-littoralis_Contig151.21.1 ID=mRNA_P-littoralis_Contig151.21.1|Name=mRNA_P-littoralis_Contig151.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig151:126057..139139+ (Pylaiella littoralis U1_48)back to top |