mRNA_P-littoralis_Contig151.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: D8LMX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX3_ECTSI) HSP 1 Score: 418 bits (1075), Expect = 5.980e-141 Identity = 274/420 (65.24%), Postives = 297/420 (70.71%), Query Frame = 1
Query: 1 KRIALTSKSSERLSWGFYVRAAAGPEKPLWQIFLFRLKTLEAEHASKLTALRSEFLRDAAGAISAGSVEAALDVTGGWSSDQHFRFMKVVKAAKGATRGSVSGVGGSLGGASSSRATMTKRLNDFLPGVSPTEILRHESWYRLRSLHLAKKRAEKQRHERELEALVIWGKKKLKTLRNEEMESAARATELEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEAERKAVQDELKRNAVADYHASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFDQFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAVMRAAGPRADAPYGQTA 1260
K ALTSKS LS R AGP+K WQ LFRL+ LEA+H S LTALRS+FLRDAAG+ SAGS EAALD GGW SD+HFRFMKV+KAAKGAT LGG+S S TKRL LPGV P EI HESWYRLR + LAKKRAEKQRH R++E LVIWGKK L+TLRNEE ESAARA E EERER XXXXXXXXXXXXXXXXXXXXXXX KR+AVA YHASLQE +RAQR+P+NR+RVGFRQ+KAR+KQE KR+QVL++LAASVPYAEACANAEAKLDHIT ATAAHFDQFLP DRSRGHCPM GYNT +VFKDARFRLGLYLREAGVSG KSAH AVMRAAGPRA APYGQ A
Sbjct: 16 KPTALTSKSLGLLSRNSCPRVPAGPKKASWQSCLFRLQALEAQHVSTLTALRSDFLRDAAGSTSAGSAEAALDQNGGWPSDRHFRFMKVIKAAKGATGXXXXXXXXXLGGSSDSSGATTKRLVAGLPGVFPAEISNHESWYRLRGVFLAKKRAEKQRHARKVEELVIWGKKALETLRNEERESAARAIEQEERERRRKELDNLLREQGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRSAVAQYHASLQELRARETDACEAAARAEEAERAQRVPVNRKRVGFRQEKAREKQEXXXXXXXXXXXXXXKRMQVLQRLAASVPYAEACANAEAKLDHITVATAAHFDQFLPHDRSRGHCPMLGYNTGEVFKDARFRLGLYLREAGVSGCKSAHVAVMRAAGPRAPAPYGQHA 435
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A7S3HHH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHH1_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 6.250e-16 Identity = 49/119 (41.18%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 844 QRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFDQFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSA 1200
Q I N+ +V R +K+E+ +E E + E +R+++L ++AA VPY +A +AE+KLDHITAA AH + + P ++SRGH P+ G+ +V +D+RFRL L +GV+GS +A
Sbjct: 10 QLIEQNKPKVERRAQLVNEKEEKKRQKEIELEEEELRRIEMLNRIAAQVPYYDAIQDAESKLDHITAAAKAH-EYYAPDEQSRGHLPLNGFTDGRVIQDSRFRLAEALHRSGVAGSLAA 127
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A2D4BWL5_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWL5_PYTIN) HSP 1 Score: 75.5 bits (184), Expect = 6.140e-11 Identity = 108/372 (29.03%), Postives = 156/372 (41.94%), Query Frame = 1
Query: 118 LEAEHASKLTALRSEFLRDAAGAISAGSVEAALDVTGGWSSDQHFRFMKVVKAAKGATRGSVSGVGGSLGGASSSRATMTKRLNDFLPGVSPTEILRHESWYRLRSLHLAKKRAEKQRHERELEALVIWGKKKLKTLRNEEMESAARATELEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEAERKAVQDELKRNAVADY-HASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENEL---REQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFD---QFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAV 1212
L E A L A EFL A +AGS+EAA TGGWS RF+ V+KA S + +L L V + RH +++ R K R ++ HER LE L +++ R E A + +LE + XXX E ++ + EL+R V +Y H L + XXX + AQ + +N ERV FRQ + +K+E+ L RE EA+A RL+ +++ A V A + TAA A+ + Q LP + G P GY+T +FK+ARFRLG+ LR+AG+ S+ A A+
Sbjct: 298 LSTELADDLAAYEREFLLLVAQDDAAGSLEAARSATGGWSPVDDERFLVVLKAF-----------------GSRPPTVLYGQLAAVLXHVDDAALRRHVKFHQHRRFXXEKTRDRQRDHERRLERLKASASERVAARRQLVAERARQLEQLERMKAECAQRHERVAELRGAREAELRIRQQQRELEALVANXXXXAEEQKWRQRHELQRRLVDEYRHDKLLDALADARREEQQREXXXQERAAQSV-VNAERVQFRQSELERKREQERLEHARELEAEAQRQARLESIKQTAPYVDRXAAIVPDPERTRQETAAFRANXEAAGQELPVHEA-GLFPTHGYDTETLFKNARFRLGIALRDAGLQSSELARQAL 650
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A7S2BDN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDN4_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.190e-10 Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 835 KRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFDQFLPFDRS----RGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAVMRA 1221
+R ++ I+R RV +R K QK E EA EA R + + +AASVPYAEA A A++ L TAA FDQ + FD + H G++ K+F D RF+LG L AGV+GS +A SAV RA
Sbjct: 26 ERLKQAEIDRSRVSYRDSKRTQKLNSIEQLRWEAAKKEAARHRAIAAIAASVPYAEAIAQAQSDLTKTTAA----FDQAV-FDAADFHRNPHSVNNGFSDKKLFADPRFKLGYALHAAGVNGSAAAASAVQRA 153
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A7S2SUG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUG3_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.290e-10 Identity = 125/365 (34.25%), Postives = 159/365 (43.56%), Query Frame = 1
Query: 193 AGSVEAALDVTGGWSSDQHFRFMKVVKAAKGATRGSVSGVGGSLGGASSSRATMTKRLNDFLPGVSPTEILRHESWYRLRSLHLAKKRAEKQRHERELEALVIWGKKKLKTLRNEEMESAARATELE-ERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEAERKAVQDELKRNAVAD------------YHASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFDQFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAVMRAAGPRADAPY 1248
AGS +AA GGW S F V K GA RG RA + +RL+ LP S E+L H W R + +KR + +RE L+ W K R E ++ RA ELE ER R E ER+AV+ RN A+ +H XXXXXXXXXXXXXXXXX + N ERV +R K QK + + +A+ E RL+ + ++AASVPYAEA A A+A L TAA A F R H + G++ K+F D RF+LG L AGVS S +A SAV R P + PY
Sbjct: 41 AGSEDAARHDHGGWESADDEVFQSVWK--HGAARGR-------------GRARLVERLSLQLPHKSKEELLSHADWVDSRRALVTRKREILETWQRERADLIAWATKAFAGAREEAAKAELRAQELEAERVRSQALHRRLDDLRAARNAEDQERLQREAQ----------AEVLEREAVE---ARNRAAEAAQXXXXXXXERFHXXXXXXXXXXXXXXXXXXXXXXXXXQTQRRENLERVSYRDSKRLQKLDALREMKWKAEQRERTRLEAIARIAASVPYAEAIAQAKADLLKPTAAVANAIFDGESF-RQNPHSIVQGFSDKKLFSDKRFKLGYALHSAGVSHSAAAASAV-RIMCPSSKRPY 375
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A8K1C5L7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5L7_PYTOL) HSP 1 Score: 72.4 bits (176), Expect = 5.970e-10 Identity = 100/371 (26.95%), Postives = 154/371 (41.51%), Query Frame = 1
Query: 118 LEAEHASKLTALRSEFLRDAAGAISAGSVEAALDVTGGWSSDQHFRFMKVVKAAKGATRGSVSGVGGSLGGASSSRATMTKRLNDFLPGVSPTEILRHESWYRLRSLHLAKKRAEKQRHERELEALVIWGKKKLKTLRNEEMESAARATELEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEAERKAVQDELKRNAVADYHASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFDQF------LPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAV 1212
L+ E + L A +F AA +A S+EAA TGGW + RF+ V+K+ S G S + +++ LP + +I RH ++R + K R + HER++ L ++++ +E E + EL+ TEE + EL+++ + DY S XXXXXX +N ERV FRQ + +K EE+ L + +A E +RL +E + VPYAE A A + TAA F LP +G P GY++ +FK+ARF+LGL LR+AG+ ++ A A+
Sbjct: 291 LQNECSDDLAAYERDFRLLAAQDDAAVSMEAASSETGGWLPAEDERFLTVLKSYD-----------RSRPGPSKKPELLYDQISAVLPHLDRQQIKRHVRFHRHLRFYQEKCRDRAKDHERKMSELKTQAQERITQAVEQEREKQKKMEELQRLRDQCQHLHGKVSEWKQTKEAEARIQAQQQELERLFVEQQKTEEENMWRRKHELQKHLLEDYRKSRLLDVLAGERETQEXXXXXXXXXXXXXXVNAERVQFRQAEYERKLEEDRLEQLRREAEEVERLAKIETIKQQVPYAEKLAAIVADPERTRQETAAFRANFEAAEDGLPV-HEKGLFPSHGYDSDTLFKNARFKLGLALRDAGLHSTEYARQAL 649
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A7S2WUK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUK3_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.960e-8 Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 859 NRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAHFDQFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAVMRAAGPRADAPY 1248
N ERV +R K QK + + +A+ E RL+ + ++AASVPYAEA A A+A L TAA A F R H + G++ K+F D RF+LG L AGVS S +A SAV R P + PY
Sbjct: 76 NLERVSYRDSKRLQKLDALREMKWKAEQRERTRLEAIARIAASVPYAEAIAQAKADLLKPTAAVANAIFDGESF-RQNPHSIVQGFSDKKLFSDKRFKLGYALHSAGVSHSAAAASAV-RIMCPSSKRPY 203
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: W2PTX2_PHYPN (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2PTX2_PHYPN) HSP 1 Score: 67.4 bits (163), Expect = 2.310e-8 Identity = 85/356 (23.88%), Postives = 149/356 (41.85%), Query Frame = 1
Query: 163 FLRDAAGAISAGSVEAALDVTGGWSSDQHFRFMKVVKAAKGATRGSVSGVGGSLGGASSSRATMTKRLNDFLPGVSPTEILRHESWYRLRSLHLAKKRAEKQRHERELEALVIWGKKKLKTLRNEEMESAARATELEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEAERKAVQDELKRNAVADYHASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEA---KLDHITAATAAHFD---QFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAV 1212
F+ A+ + +AGS+EAA GGWS RF+KV+++ + + GA + +L LP V EI +H +++ + K++ ++ +R+LE L + +T +E E + +L + ++ X EE + + + ++ AV +Y +RA + +N ERV +R + ++K EE + E LE +RL L +L + PYA+ AN + +T A A+ + + LP + G P GY+ +FK+ARF+LG+ LR AG++ S A A+
Sbjct: 276 FINAASASDAAGSIEAASSKGGGWSEANEERFLKVLRSYE------------NKHGAGKKPQLLYDQLALVLPNVPLIEIKKHVKFHQHYRFYQEKRKDRQREFQRKLEELQNGATTRFRTAMEQEQERVRKLQQLHDMQQQCDQRHEQISQWRVTKEAKERIEKQQREIEQLLENQKXKEEELQWRRKHDQQKIAVDEYKKGKTLQKMADEKLTMEEEQRRGEERALQSVVNAERVQYRHHEFQRKMEEMKQEELHKAELEGQRLVKLNELKETTPYAQIIANIAPDPERTRQVTVAFRANVEAAQEGLPVTET-GLFPSHGYDCETLFKNARFKLGIALRNAGLNSSDYARQAL 618
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: A0A6A3YKD4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YKD4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.330e-7 Identity = 88/383 (22.98%), Postives = 150/383 (39.16%), Query Frame = 1
Query: 100 LFRLKTLEA------EHASKLTALRSEFLRDAAGAISAGSVEAALDVTGGWSSDQHFRFMKVVKAAKGATRGSVSGVGGSLGGASSSRATMTKRLNDFLPGVSPTEILRHESWYRLRSLHLAKKRAEKQRHERELEALVIWGKKKLKTLRNEEMESAARATELEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEAERKAVQDELKRNAVADYHASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHITAATAAH------FDQFLPFDRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAV 1212
+ R++ LEA E L +F+ A+ +AGSVEAA +GGWS RF+KV+++ + G + ++ LP + +I +H +++ + K++ ++ +R LE L K +E + + + + EEA R + + ++ AV +Y +RA + +N ERV +R + ++K E+ +L E LE +RL L +L PYA+ AN + TAA + LP + + G P GY+ +FK+ARF+LG+ LR AG+S S+ A A+
Sbjct: 319 MLRIEMLEAFRNVFAEFRHDLAQYEKDFVSAASSTDAAGSVEAATSKSGGWSDTDEERFLKVLRSYE------------KKHGTGKKPQLLYDQITLVLPTIPVPDIKKHVRFHQHLRFYQDKRKDRQRELQRGLEVLQSEAATKFGIAIEQEQQRLQKLQQFSVMQEQCEQRHDLVSKWRVTKEAKERIERQQREIEAILEAQLQQEEALRWKRKHDQQKLAVDEYKKDKVLRKMADEKLSIEEEQQREAERALQSAVNVERVQYRHHEFQRKLEDMKLEELHKAQLEEQRLAQLNELKEKTPYAQIIANIAPDFERTRQETAAFRSNVEAAQEGLPLNET-GLFPSHGYDCNTLFKNARFKLGIALRNAGLSSSEYARQAL 688
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Match: W4FRQ1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FRQ1_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.820e-6 Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 1
Query: 709 AERKAVQD-ELKRNAVADYHASLQEXXXXXXXXXXXXXXXXXVKRAQRIPINRERVGFRQDKARQKQEENELREQEAKALEAKRLQVLEKLAASVPYAEACANAEAKLDHI---TAATAAHFDQFLPF--DRSRGHCPMFGYNTAKVFKDARFRLGLYLREAGVSGSKSAHSAV 1212
A+RK +++ ELK+ + D+ + Q + +R +N ERV FR ++ QK ++ + R + EA+RL+VLE + PYAE E + T A A+ D G P GY+T K+FKDARF+LGL LR+AG+ + A A+
Sbjct: 458 ADRKRLKEHELKKKLLQDHRSWQQVDMLAQDEATALKRAIEAEELKERDAVNAERVAFRVEEYEQKCDDAKRRAIQRADDEAERLRVLEAIKQETPYAEKLNQIEMDPERTRQPTVAFTANVDAIQDGLGVHETGLFPSHGYDTDKLFKDARFKLGLALRDAGLGSTDYARKAM 631 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig151.10.1 >prot_P-littoralis_Contig151.10.1 ID=prot_P-littoralis_Contig151.10.1|Name=mRNA_P-littoralis_Contig151.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=422bp KRIALTSKSSERLSWGFYVRAAAGPEKPLWQIFLFRLKTLEAEHASKLTAback to top mRNA from alignment at P-littoralis_Contig151:33466..38177- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig151.10.1 ID=mRNA_P-littoralis_Contig151.10.1|Name=mRNA_P-littoralis_Contig151.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4712bp|location=Sequence derived from alignment at P-littoralis_Contig151:33466..38177- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig151:33466..38177- >mRNA_P-littoralis_Contig151.10.1 ID=mRNA_P-littoralis_Contig151.10.1|Name=mRNA_P-littoralis_Contig151.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1266bp|location=Sequence derived from alignment at P-littoralis_Contig151:33466..38177- (Pylaiella littoralis U1_48)back to top |