mRNA_P-littoralis_Contig1506.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 7.450e-52 Identity = 86/128 (67.19%), Postives = 98/128 (76.56%), Query Frame = 2
Query: 431 GPWTGLFVRTIRPTTRDTAEPNSYYSGHEKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPSSDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQPFGIMV 814
G GLFVR I P + A P S+YSGH+K FGMNFQGIC+A Y II WTMN PG QNDRTAFK SGF+ LL +PPD FI+GDAAYP+S+RVLVP PGT L DA+NF+QSQ RISIEQ FGI+V
Sbjct: 186 GAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILV 313
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 182 bits (463), Expect = 2.480e-51 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 2
Query: 431 GPWTGLFVRTIRPTTRDTAEPNSYYSGHEKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPSSDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQPFGIMV 814
G GLFVR +P+ R P S+YSGH+KGFGMNFQG+C+A Y IIAWTMN PG NDRTAFK S F +L+ LPP +I+GDAAYP+SD+VLVPYPGT+L DA+NF+QSQ RISIEQ FGIMV
Sbjct: 182 GAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMV 309
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 181 bits (460), Expect = 6.720e-51 Identity = 80/141 (56.74%), Postives = 107/141 (75.89%), Query Frame = 2
Query: 392 RNAAQSVLSGNASGPWTGLFVRTIRPTTRDTAEPNSYYSGHEKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPSSDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQPFGIMV 814
RN + + G GLFVR I+P+ ++ AEPN YY+GH+KGFGMNFQ +CDA+YRI+AW MN PG QNDRTAF FSGF++LL LP +F++GDAAY +S+RV+VP+PGT+L DA N++ SQ R++IEQ +GI+V
Sbjct: 162 RNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 302
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 177 bits (448), Expect = 8.090e-51 Identity = 80/148 (54.05%), Postives = 108/148 (72.97%), Query Frame = 2
Query: 371 PTTPLTSRNAAQSVLSGNASGPWTGLFVRTIRPTTRDTAEPNSYYSGHEKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPSSDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQPFGIMV 814
P P S AA + G GLFVR I+P+ ++ AEPN YY+GH+ GFGMNFQ +CDA+YRI+AWTM+ PG QNDRTAF F+ F++LL LP +F++GDAAY +S+RV+VP+PGT+L DA N++ SQ R++IEQ +GI+V
Sbjct: 3 PEPPSFSATAALVDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 150
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.150e-50 Identity = 88/148 (59.46%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFTILVDHLRPELERDTSMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADNAAHFEKRCSVGVIRKCVGAMDG 444
++RSTL+ RERR + YIKPML D TF RFRM + DF +LVDHLRP L+++ G LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED+ + + + V+RKCVGAMDG
Sbjct: 44 RNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDG 190
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 171 bits (432), Expect = 2.020e-47 Identity = 77/128 (60.16%), Postives = 93/128 (72.66%), Query Frame = 2
Query: 431 GPWTGLFVRTIRPTTRDTAEPNSYYSGHEKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPSSDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQPFGIMV 814
G GLFV P+ R P +YSGH+KGFGMNFQ +C+A Y+I AWTMN PG NDRTAFK SGFE++L+ LP +I+GD AYP+SD+VLVPYPGT L D++NF+QSQ RI IEQ FG MV
Sbjct: 116 GAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMV 243
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 169 bits (429), Expect = 3.680e-47 Identity = 83/148 (56.08%), Postives = 101/148 (68.24%), Query Frame = 1
Query: 1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFTILVDHLRPELERDTSMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADNAAHFEKRCSVGVIRKCVGAMDG 444
++RSTL+ RERR + +IKP+L D TF RFRM + DF +L+DHLRP L ++ MG LR GA+PVEYQ+ +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP DV +RKCVGAMDG
Sbjct: 44 RNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDG 176
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.730e-34 Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFTILVDHLRPELERDTSMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTA----FRVIKAINDCTELDCKWPATPED-VADNAAHFEK 396
+ RSTL+ R RR + YIKPML D TF RFRM + DF +LVDHLRP L+++ MG LRNGA+PVEYQV +TLRWLAG S YE MDGHVIARSTAY +R++ + +C P + D A N + F+K
Sbjct: 44 RSRSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHAVCDAQYRIMAWMMNC-------PGSQNDRTAFNFSGFDK 173
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 138 bits (347), Expect = 3.970e-34 Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 2
Query: 443 GLFVRTIRPTTRDTAEPNSYYSGHEKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPSSDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQPFGIMV 814
GLFV+T+ PT +T SYYSG + G+G+N Q CDA YR + + +PG ND TA+ S +++LPP +++LGDAAYP SD +L PYPG LP DAFNF+ SQ R+ IEQ FGI+V
Sbjct: 214 GLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILV 337
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Match: A0A6H5J9B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B3_9PHAE) HSP 1 Score: 129 bits (323), Expect = 8.880e-34 Identity = 67/127 (52.76%), Postives = 82/127 (64.57%), Query Frame = 1
Query: 163 MGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADNAAHFEKRCSVGVIRKCVGAMDGSLCPHHQTDHQRYSRTEQLLQRSREGIWHELSG 543
MG LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S G + G+ +CP Q + + R + +LQR++E + HEL G
Sbjct: 1 MGLLRNGAIPVEYQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAAGAAELFRNRSSYGCRPEVRGSHGWLVCPDDQAEREGGRRAQLMLQRAQERLRHELPG 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1506.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1506.1.1 >prot_P-littoralis_Contig1506.1.1 ID=prot_P-littoralis_Contig1506.1.1|Name=mRNA_P-littoralis_Contig1506.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp MSSLGVPHTRQRFALSRPSTTVLSWTASGPPRRRTSPTTPLTSRNAAQSVback to top mRNA from alignment at P-littoralis_Contig1506:11723..12979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1506.1.1 ID=mRNA_P-littoralis_Contig1506.1.1|Name=mRNA_P-littoralis_Contig1506.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1257bp|location=Sequence derived from alignment at P-littoralis_Contig1506:11723..12979- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1506:11723..12979- >mRNA_P-littoralis_Contig1506.1.1 ID=mRNA_P-littoralis_Contig1506.1.1|Name=mRNA_P-littoralis_Contig1506.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=588bp|location=Sequence derived from alignment at P-littoralis_Contig1506:11723..12979- (Pylaiella littoralis U1_48)back to top |