prot_P-littoralis_Contig1501.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1501.7.1
Unique Nameprot_P-littoralis_Contig1501.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A2D8LMT2_9FLAO (DNA topoisomerase I n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LMT2_9FLAO)

HSP 1 Score: 177 bits (450), Expect = 4.110e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 86
            MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD
Sbjct:  275 MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 360          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A370QGB1_9FLAO (DNA topoisomerase-1 n=1 Tax=Marinirhabdus gelatinilytica TaxID=1703343 RepID=A0A370QGB1_9FLAO)

HSP 1 Score: 143 bits (360), Expect = 1.130e-39
Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 86
            MPKTKK++K N L AYD AAEGLGNTRSVC+ YYVHPILPE YEDG+IEFYLKKLNHDT I T P+FSPTETV+LQM+ QY+VI D
Sbjct:  275 MPKTKKDIKKNILEAYDKAAEGLGNTRSVCRSYYVHPILPEKYEDGTIEFYLKKLNHDTIIDTKPHFSPTETVLLQMIKQYEVIFD 360          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A7G8PX51_9FLAO (DNA topoisomerase I n=1 Tax=Constantimarinum furrinae TaxID=2562285 RepID=A0A7G8PX51_9FLAO)

HSP 1 Score: 141 bits (355), Expect = 6.370e-39
Identity = 65/86 (75.58%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 86
            +PKTKKELK+N L AYDAAA GLGNTR+VC++YYVHPILP+ YEDGSIEFYLKKLNH++ I+TIP+FS TETV+LQ+L QYK+ LD
Sbjct:  275 IPKTKKELKSNILSAYDAAASGLGNTRAVCRKYYVHPILPQKYEDGSIEFYLKKLNHESDIETIPHFSRTETVLLQLLKQYKITLD 360          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A2E2W838_9FLAO (DNA topoisomerase I (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2W838_9FLAO)

HSP 1 Score: 95.1 bits (235), Expect = 3.570e-24
Identity = 40/57 (70.18%), Postives = 52/57 (91.23%), Query Frame = 0
Query:   30 CKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 86
            C++YYVHPILP+ +EDGSIEFYLKKLNH+  I +IP+FS TETV+LQMLS+Y+++LD
Sbjct:    1 CREYYVHPILPQKFEDGSIEFYLKKLNHEEDIASIPHFSVTETVLLQMLSEYQIVLD 57          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A2D9N1Q2_9FLAO (DNA topoisomerase I n=2 Tax=Altibacter TaxID=1535231 RepID=A0A2D9N1Q2_9FLAO)

HSP 1 Score: 99.8 bits (247), Expect = 4.170e-23
Identity = 48/86 (55.81%), Postives = 67/86 (77.91%), Query Frame = 0
Query:    1 MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 86
            + +T KE K+  L+AYDAAAEGLGNTR+VCK+YYVHP+LPE YE G+I+ Y + L+  ++  T P+ S TET +LQ+ S+Y+V+LD
Sbjct:  275 LSETAKERKSVILKAYDAAAEGLGNTRTVCKKYYVHPMLPESYESGAIKKYFRILDESSN--TDPHLSLTETTLLQLFSEYRVVLD 358          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: UPI001CA8557E (DNA topoisomerase IB n=1 Tax=Marixanthomonas sp. SCSIO 43207 TaxID=2779360 RepID=UPI001CA8557E)

HSP 1 Score: 91.7 bits (226), Expect = 4.330e-20
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 0
Query:    5 KKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNF-SPTETVMLQMLSQYKVILD 86
            K + K N L AYDAAAEGLGNTR+VC++YYVHP+L E YEDGSI+ Y  KL  DT IK  P   S TETV+L +L++Y+V L+
Sbjct:  279 KSQNKKNILEAYDAAAEGLGNTRAVCRKYYVHPVLVEKYEDGSIQSYFDKL--DT-IKNKPKLLSTTETVLLDLLNEYEVRLN 358          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A2D9BGX3_9FLAO (DNA topoisomerase I n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D9BGX3_9FLAO)

HSP 1 Score: 91.3 bits (225), Expect = 6.020e-20
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    6 KELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNF-SPTETVMLQMLSQYKVILD 86
            K+ K N L A+DAAAEGLGNTR+VC+QYYVHPIL   YED SI  Y KKL  DT I+  P F S TETV+L +L++Y+V L+
Sbjct:  280 KQNKKNILTAFDAAAEGLGNTRAVCRQYYVHPILIXKYEDSSIAXYFKKL--DT-IRNTPKFLSTTETVLLDLLNEYEVTLN 358          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A507ZPC3_9FLAO (DNA topoisomerase IB n=1 Tax=Haloflavibacter putidus TaxID=2576776 RepID=A0A507ZPC3_9FLAO)

HSP 1 Score: 89.0 bits (219), Expect = 4.520e-19
Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    6 KELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVIL 85
            K+   N + A D AAE LGNTRSVC+ YYVHP++ E Y+DGSI+ Y  K++     K IPNFS TE ++L+++  YK+ L
Sbjct:  281 KQQDKNIISALDEAAEALGNTRSVCRSYYVHPVITEHYKDGSIQEYFDKVDKQATKKEIPNFSNTEKILLELMKNYKITL 360          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A3E1Q9N8_9FLAO (DNA topoisomerase IB n=1 Tax=Marixanthomonas ophiurae TaxID=387659 RepID=A0A3E1Q9N8_9FLAO)

HSP 1 Score: 88.6 bits (218), Expect = 6.000e-19
Identity = 43/81 (53.09%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    6 KELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD 86
            K+ K N L AYDAAAEGLGNTR+VC++YYVHP+L E YEDGSI  Y +K++   + K +   S +ETV+L +L++Y+V ++
Sbjct:  280 KQNKKNILTAYDAAAEGLGNTRTVCREYYVHPVLIEKYEDGSIRSYFEKVDTIKNNKDL--LSTSETVLLDLLNEYEVTIN 358          
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Match: A0A2G1VUI5_9FLAO (DNA topoisomerase I n=4 Tax=Leeuwenhoekiella TaxID=283735 RepID=A0A2G1VUI5_9FLAO)

HSP 1 Score: 88.2 bits (217), Expect = 8.330e-19
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    6 KELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEFYLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKV 83
            K+   N + AYDA AEGLGNTRSVC+ YYVHP++PE Y+DGSI    +KL  D  ++   NFS TE V+ +MLS Y+V
Sbjct:  280 KQNAKNLITAYDATAEGLGNTRSVCRDYYVHPVIPEAYQDGSITKSFEKLK-DKSLRNRKNFSKTEQVIAEMLSNYEV 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1501.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LMT2_9FLAO4.110e-53100.00DNA topoisomerase I n=2 Tax=Flavobacteriaceae bact... [more]
A0A370QGB1_9FLAO1.130e-3977.91DNA topoisomerase-1 n=1 Tax=Marinirhabdus gelatini... [more]
A0A7G8PX51_9FLAO6.370e-3975.58DNA topoisomerase I n=1 Tax=Constantimarinum furri... [more]
A0A2E2W838_9FLAO3.570e-2470.18DNA topoisomerase I (Fragment) n=1 Tax=Flavobacter... [more]
A0A2D9N1Q2_9FLAO4.170e-2355.81DNA topoisomerase I n=2 Tax=Altibacter TaxID=15352... [more]
UPI001CA8557E4.330e-2060.24DNA topoisomerase IB n=1 Tax=Marixanthomonas sp. S... [more]
A0A2D9BGX3_9FLAO6.020e-2060.98DNA topoisomerase I n=2 Tax=Flavobacteriaceae bact... [more]
A0A507ZPC3_9FLAO4.520e-1950.00DNA topoisomerase IB n=1 Tax=Haloflavibacter putid... [more]
A0A3E1Q9N8_9FLAO6.000e-1953.09DNA topoisomerase IB n=1 Tax=Marixanthomonas ophiu... [more]
A0A2G1VUI5_9FLAO8.330e-1955.13DNA topoisomerase I n=4 Tax=Leeuwenhoekiella TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.132.120coord: 1..84
e-value: 8.1E-15
score: 56.7
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 6..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1501contigP-littoralis_Contig1501:13220..13480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1501.7.1mRNA_P-littoralis_Contig1501.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1501 13220..14284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1501.7.1 ID=prot_P-littoralis_Contig1501.7.1|Name=mRNA_P-littoralis_Contig1501.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MPKTKKELKTNSLRAYDAAAEGLGNTRSVCKQYYVHPILPEMYEDGSIEF
YLKKLNHDTHIKTIPNFSPTETVMLQMLSQYKVILD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011010DNA_brk_join_enz