prot_P-littoralis_Contig150.82.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig150.82.1
Unique Nameprot_P-littoralis_Contig150.82.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length131
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig150.82.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 8.270e-24
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 0 
Query:    2 AQRNIEGDDGLSAGDRWGDACVRGLTAGEAGVSGVLGLVGGRDVLWSKNCAAVASGNARTAGGAGPRCAKCKEFWRVTVKPKIKNFLSPAHKHTTDKDLSTGQKVSQ 108
            A+R + GDDGL+  +RW  A VRG+T G A VSGVLGLV G DVLWSK+C  +AS N    G   PRC++C++FWR  VK ++++F   A K+T    LST QK ++
Sbjct:   60 AERTLGGDDGLAPPERWEHARVRGVTTGRACVSGVLGLVEGSDVLWSKDCCGMASVNRGAGGSMVPRCSRCQKFWRDNVKGRMESFHGDAAKNTAIDHLSTAQKKTR 166
[Close]
BLAST of mRNA_P-littoralis_Contig150.82.1 vs. uniprot
Match: A0A6H5KCN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN5_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.150e-10
Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = 0 
Query:   16 DRWGDACVRGLTAGEAG-VSGVLGLVGGRDVLWSKNCAAVASGNARTAGGAGPRCAKCKEFWRVTVKPKIKNFLSPAHKHTTDKDLSTGQKVSQASTNQR 114
            DRW  A VRG+ AG  G VSGV+GLVG  DVLWS+ C   A+ +    G   PRC  CK+F+R  + P+  +    A KHT  K      +VS+ ST Q+
Sbjct:   50 DRWQHADVRGVLAGPNGHVSGVMGLVGREDVLWSRKCTGFATPSYGRTGV--PRCTHCKDFYRRGMTPRTAH----AAKHTPAKKT----RVSEMSTAQK 139
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig150.82.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRH8_9PHAE8.270e-2450.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCN5_9PHAE1.150e-1044.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig150contigP-littoralis_Contig150:470654..471046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig150.82.1mRNA_P-littoralis_Contig150.82.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig150 470654..471241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig150.82.1 ID=prot_P-littoralis_Contig150.82.1|Name=mRNA_P-littoralis_Contig150.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp
QAQRNIEGDDGLSAGDRWGDACVRGLTAGEAGVSGVLGLVGGRDVLWSKN
CAAVASGNARTAGGAGPRCAKCKEFWRVTVKPKIKNFLSPAHKHTTDKDL
STGQKVSQASTNQRGHGMEWLVENETVGNV*
back to top