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Homology
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: D8LTV7_ECTSI (Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV7_ECTSI) HSP 1 Score: 508 bits (1307), Expect = 1.400e-164 Identity = 395/632 (62.50%), Postives = 423/632 (66.93%), Query Frame = 2
Query: 512 MASTI-PVDNSTTDSGAPEESRTPLLEDG--------RLRSQSQGSTGGGEENAFADDGGDSSGALDQADVAYSANSFMAVVKPVTLCMTLSALITVSLYKDAEGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSR-GKEGAGRVVDFHASPR----SSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGERESASRXXXXXXXXXXXXXXXXXXXXDEEGVSIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLYF 2365
MAST P+++S GA EE+R PLLE+G R R+ QG+ D+ G GALDQADVAYSANSFMAVVKPVTLCMTLSA ITVSLY DAEGATNSALSVYEVYD S LDPS+VRLGKS VNA IIVLVLAAAT IVW LVGYMAMSSAVLLGVMGGAVW +ALEV+QLPCDA TYYG LWNFAVVGV+AIFYQKGI TVVTQ YLVATSIIMAWQLSRF+EWTGWCLLVVLALYDLCAVL+P GPL+ALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXX A G G +G GG XXXXXXXXXXX X XXXXXXXXXXXXXXXXX G H+S R G + AG + A+P SG + A + R+G R G G L+ + E++ XXXXXXXXXX GVSIKLGLGDFVFYSVLVSKAALYGFT WAACVVVIVFGLG TLVLLAVYRMALPALPISIG GTVFYLLTRFSIQPYVEALN+TPLYF
Sbjct: 1 MASTAEPIEDSDAGVGAAEEARAPLLEEGHGTLQPPHRRRTAQQGNP---------DENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXQPG----------ATGGPQEGDVSSSPRAPVGTATMGGXX--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGDHSSARRPGADSAG-ASESVAAPLLELVESGTAAVAVGDASADGSGTRSGREQGKRRLATVRRGIRGG---------GCLDPEPPGWRTVQAEKK-LELFSPVPTSSRAXXXXXXXXXXXXXGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNETPLYF 582
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A6H5KLU3_9PHAE (Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU3_9PHAE) HSP 1 Score: 504 bits (1298), Expect = 5.490e-163 Identity = 412/634 (64.98%), Postives = 438/634 (69.09%), Query Frame = 2
Query: 512 MASTI-PVDNSTTDSGAPEESRTPLLEDGR--------LRSQSQGSTGGGEENAFADDGGDSSGALDQADVAYSANSFMAVVKPVTLCMTLSALITVSLYKDAEGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKE----GAGRVVDFHASPRSSGNTS---AADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGERESASRXXXXXXXXXXXXXXXXXXXXDEEGVSIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLYF 2365
MAST P+++S GA EE+R PLLE+G R+ QG+ D+ G GALDQADVAYSANSFMAVVKPVTLCMTLSA ITVSLY DAEGATNSALSVYEVYD S LDPS+VRLGKS VNA IIVLVLAAAT IVW LVGYMAMSSAVLLGVMGGAVW +ALEV+QLPCDA TYYG LWNFAVVGV+AIFYQKGI TVVTQ YLVATSIIMAWQLSRF+EWTGWCLLVVLALYDLCAVL+P GPL+ALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXX G +E G+ G GG + + GXXXXXX XXXXXXXXXXX X XXXXXXXXXX G + + E G V AS SG TS + R S QR FG G+ +G A + +S XXXXXXXXXXXXXXXXXXXX E GVSIKLGLGDFVFYSVLVSKAALYGFT WAACVVVIVFGLG TLVLLAVYRMALPALPISIG GTVFYLLTRFSIQPYVEALNDTPLYF
Sbjct: 1 MASTTEPMEDSDAGLGAAEEARAPLLEEGHGTLQPPHGRRTAHQGNP---------DENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTNLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXG--------------GPQE--GDPYSSPRTPVGTATVGGGLADLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPGAGGAGASESVAAPLLELVESGTAAVAVGDASADGSGTTSDRGQVRSPRARGAAAPAAASGDLDSCAAVSPXXXXXXXXXQR-FG-GASAEGDALI-------QSPRXXXXXXXXXXXXXXXXXXXXXXEMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLYF 600
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: W7TKB5_9STRA (Presenilin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKB5_9STRA) HSP 1 Score: 319 bits (818), Expect = 6.310e-94 Identity = 241/572 (42.13%), Postives = 285/572 (49.83%), Query Frame = 2
Query: 680 LDQADVAYSANSFMAVVKPVTLCMTLSALITVSLYKDAEGATNSALSVYEVYDASA--NPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDS---------RGERESASRXXXXXXXXXXXXXXXXXXXXDEEGVSIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
LD DV YSANSF AV+KPV L M L++L+ V++ A + +SVY + D A N D ++V+LGKSLVNA IV V+ AT +V L GYMA+SS +LLG+MGG +W +AL + LPCD T+ L+NFA VGV+AIFYQKGI T VTQGYLV S+IMAWQLSRF+EWTGW LLVVLALYDLCAVL+P GPLR LV LMQEY EPMPGLLYEAELP G R G E G A G G R Q+ + DG S + V + P S D L+ SR R S+ GE LEDG S ++ RGER + R E SIKLGLGDFVFYSVLV KAALYGF T AAC +VI+ GLG TLVLL+V+R ALPALPISIGLG +FYLLTR +I PY++AL TP+Y
Sbjct: 44 LDIEDVLYSANSFWAVLKPVALTMFLASLVVVNV---AFATEDQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELP-GHARHHHRIPPSTAL--------------------------------RGSERATGALASAGSL---------DGGCEGDDVRLQAPVGD-----------------------------------DGAFSPAMALGSQAHTVHSTSPP------SPLDPLLDGTQSSPGGTHLGQHHPPHPSRSLRR---VSRSQGGETLLEDGMGSPVEGGNEHGGESERGERGESGRGHGPSEGLSSSSHHQGGTPEQER--SIKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIY 524
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A7S2XWZ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWZ8_9STRA) HSP 1 Score: 313 bits (802), Expect = 1.320e-92 Identity = 242/567 (42.68%), Postives = 287/567 (50.62%), Query Frame = 2
Query: 692 DVAYSANSFMAVVKPVTLCMTLSALITVSLY-KDAEGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRV----VDFHASPRSSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGERESASRXXXXXXXXXXXXXXXXXXXXDEEGV-----SIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
++ YS NSFMAVVKPV + M L++ + V++ +++ S LS YEVYD S + D +VRLGKS++NA IVLVLA AT IV L+GYM SS +LLG+MGG V +AL+ + + D TYY L+NF++VGVIAIFYQ+GI VVTQGYLV TS+IMAWQL+RF+EWTGW LLVVLA YDLCAVL+P GPL+ALVNLMQEYEEPMPGLLYEAEL E G V T RGGR + DS G S S G + AGRV + H P+SSG +TA ER P R GR + G GS DGS+ I G S DE+ V SIKLGLGDFVFYSVLVSKAAL+GF T A C + I GLG TLVLL+VY+MALPALPISI LG YLLTR + PYVE L P+Y
Sbjct: 12 EMVYSVNSFMAVVKPVMITMLLASYVVVNVSTEESRSQQMSGLSAYEVYDTS-DESDSDSVRLGKSVINALTIVLVLAGATFAIVLLYKFRCMKCLIGYMMFSSVMLLGIMGGMVLWTALDKWNVVMDEYTYYFILYNFSMVGVIAIFYQQGIPMVVTQGYLVLTSVIMAWQLARFEEWTGWSLLVVLAFYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAEL-----------------------------------------------RSETGSNVS-------PTPRGGRKSYQ----------------------------RDSE--------------------SGLESASIGPDSAGRVGVETEETHLLPQSSG-----ETAPER----------------PRVRGAGRK---QEGEAGNGSP-DGSSGDIQQNGGAPPGS-VNHPPGPQAAAPAAYVVDPGDEDLVVYQERSIKLGLGDFVFYSVLVSKAALFGFLTCATCFLAITAGLGATLVLLSVYKMALPALPISIFLGVTCYLLTRVLLIPYVENLAAVPIY 449
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A7S2F2R2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2R2_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.720e-78 Identity = 207/538 (38.48%), Postives = 260/538 (48.33%), Query Frame = 2
Query: 749 MTLSALITVSLYKDAEGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGERESASRXXXXXXXXXXXXXXXXXXXXDEEGVSIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
M L++L V+L ++ + A +VY V D S D +TV+LGKS+VNA IIV VLAAAT IV L+GYM +SS +LLG+MG + +ALE++Q+PCDA+T+Y +NFAVVGVI+IF++KGI +TQ YLV TS++MAWQLS F+EWTGWCLLV LALYDLCAVL+P GPL+ALV LMQEY EPMPGLLYEAELP+ E+ G V+ PA TS ++ A + RS G DTA+ + G G +E+G+A E+ + E SIKLGLGDFVFYSVLVSKAALY F T A C +VI+ GLG TLVLL+V++ ALPALPISIGLG F+ LTRF I P++EAL TP+Y
Sbjct: 1 MLLASLAVVALQEETGEESLDAYTVYNVGDESG---DTNTVKLGKSIVNALIIVCVLAAATFGIVCLYKYRCMKLLIGYMMLSSMMLLGLMGSLMLWTALELWQVPCDAITFYFIAYNFAVVGVISIFWKKGIPMQITQFYLVCTSVLMAWQLSHFEEWTGWCLLVALALYDLCAVLTPCGPLKALVTLMQEYNEPMPGLLYEAELPS---------------------------------------------EDNGTPTVI-------------------------------PPA---------------------------------------TSLNQSASSAQEM-------RSLGQQQRQDTAVVQ---------------------------------GAG-VENGTAPTSVHTPTEETEIQAFG------------------EADRSIKLGLGDFVFYSVLVSKAALYDFATCAICFLVILSGLGATLVLLSVFQKALPALPISIGLGVSFFFLTRFLIVPFIEALAGTPIY 361
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A835ZDC4_9STRA (Presenilin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC4_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.180e-65 Identity = 217/544 (39.89%), Postives = 260/544 (47.79%), Query Frame = 2
Query: 803 TNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGS------------------------ALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGERESASRXXXXXXXXXXXXXXXXXXXXDEEGVSIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
T +L+ V D S N S+ LGKSLVN+ +IV VLA AT IV L+GYM +SS LLG+MGG V+ + AL+++Q+P D T+ LWNFA VGVIAIFYQKG+ TVVTQ YLVATS+IMAWQLSRFDEWTGW LLVVLA+YDLCAVLSP GPL+ALVNLMQEY EPMPGLLYEAELP RP ++ A XXXXXXXXXXX + S + + + D+ P SA L + R+GG SG + G A RES XXXXXXXXXXX EE +IKLGLGDFVFYSVLVSKA LY FT + +C+ ++ GL TLVLL++++ ALPALPISI LG Y +TRF++QP + L LY
Sbjct: 18 TARSLARPRVCDNSGNT---SSALLGKSLVNSLVIVAVLAVATTLIVLLYKFRCMRCLLGYMMLSSVSLLGLMGGLVFLTMCCSFGTRDTRALHALLRATPCVQALDMWQIPMDMFTFIMCLWNFAAVGVIAIFYQKGLPTVVTQAYLVATSVIMAWQLSRFDEWTGWALLVVLAMYDLCAVLSPCGPLKALVNLMQEYNEPMPGLLYEAELP----------------------------------------------------------------------------------RPVAARAAXXXXXXXXXXXXGA-------------------------SSAGARLASEDPQDYDVGPGVGLMASAVVLMLNEEGAAE------------APRQGGDSGGGT----------GGDAH------RRESXXXXXXXXXXXXXX----------EEERNIKLGLGDFVFYSVLVSKAGLYSFTAFVSCLCAVLCGLMATLVLLSLHKAALPALPISIALGVATYFVTRFAMQPALVHLGSQGLY 413
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A1Z5KQA4_FISSO (Presenilin n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQA4_FISSO) HSP 1 Score: 234 bits (598), Expect = 4.240e-63 Identity = 189/560 (33.75%), Postives = 246/560 (43.93%), Query Frame = 2
Query: 701 YSANSFMAVVKPVTLCMTLSALITVSLYKDA-----EGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEP-MPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGERESASRXXXXXXXXXXXXXXXXXXXXDEEGVSIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
YS++S+ A+ KPVTL M LSAL V + DA E A +A + V DA + S L SL NA IIV V+ T IV L+GYM S LLG++GG V +A++V+ +P D T+Y ++NF +VGV+A+F+ +GI T VTQGYLVATS+I+AW LS FD+WT W LL++LALYDLCAVL+P GPL+ LV M + P MPGLL+EAELP R G GR P S P + D R + G + S+ TA + R+G + + R R E SI+LGLGDF+FYSVLV+KAA Y F T+AAC++VI+ GLG TLVLL+VY ALPALPISI +G VFY+LTR+ I+P+VEA+ + P Y
Sbjct: 69 YSSSSYYAIAKPVTLTMVLSALAVVLINDDATKQGNEAAMANAYQYFSVNDAGQS----SGQNLAHSLANALIIVSVICGMTFMIVVLYRMKFMKCLIGYMIFCSGTLLGMLGGNVLQTAVQVYNIPVDKGTFYLFVYNFCIVGVLAVFFGQGIPTSVTQGYLVATSVILAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELPPEAKRPV-----------------------------------------------------GSSRGRANIAASASDVERSAPPNPVSQPMDGSSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPD------RSSDTIGTTSPLLTNSDSTVILPENPTAEQLLAKVVVRLPAHGGRLEHVQRRGKK--------------------VYLERDRHGVPKRYLWVDRNGKVFAEMKDGDEEKPEKNSIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVLTRWFIEPWVEAVLEKPYY 545
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A7S4DGE7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGE7_HETAK) HSP 1 Score: 217 bits (552), Expect = 2.780e-60 Identity = 121/208 (58.17%), Postives = 153/208 (73.56%), Query Frame = 2
Query: 680 LDQADVAYSANSFMAVVKPVTLCMTLSALITVSLYKDAEGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRA 1303
LD +V Y+ NSFMAV+KPVT+ M L+++ TV + D+ T+S+LS YEVYD S+ ++VRLG+S+VNA ++V VLAAAT IV LVGYM SS +LLG MGG V + L+ +++P D T+ ++NF VVGVI+IFYQKGI T VTQ YLVATSIIMAWQLSRF++WTGW LLVVLALYDLCAVL+P GPL+A
Sbjct: 50 LDLEEVTYAINSFMAVLKPVTVTMVLASIATVYVQSDSID-TSSSLSAYEVYDTSSAAGTSASVRLGESIVNALVVVCVLAAATFGIVLLYKYRCMKCLVGYMMCSSVMLLGAMGGMVLWTLLQKWEVPFDQYTFLFIVYNFGVVGVISIFYQKGIPTGVTQSYLVATSIIMAWQLSRFEDWTGWSLLVVLALYDLCAVLTPCGPLKA 256
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A7S3VFK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VFK8_9STRA) HSP 1 Score: 234 bits (596), Expect = 8.830e-60 Identity = 189/563 (33.57%), Postives = 259/563 (46.00%), Query Frame = 2
Query: 701 YSANSFMAVVKPVTLCMTLSALIT--VSLYKDAEGATNSALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEP-MPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALE---RXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGE-RESASRXXXXXXXXXXXXXXXXXXXXDEEGVS--IKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
+ +SF A+ PV +CM LSAL + + + + AT + Y V D S NP + + G SLVN +IV V+AA T IV L+GYM +SS +LLG +GG ++ ++ + + D T+Y + NFA+VG IA FY KGI +VTQ Y +ATS+I+AWQLS F++WT W LLV+LALYDLCAVL+P GPL+AL+NLMQ + P MPGLLYEA LP G R + ++ + V +G +Q + P + + C + K + D S R S + T ++ S RK +R+ GEG ++D GE R ++ ++ IKLGLGDF+FYSVLVSKAALY FTT+AAC + I+ GLG TLVLL+VY ALPALPISI LG +FY TR ++P++E + P Y
Sbjct: 486 FGFSSFHAMTTPVVICMILSALAVTFIQIEEQRDIATETMTDAYTVIDIS-NPSNSNLRNFGASLVNGLVIVSVVAAMTFLIVILYKYRCMKLLLGYMVLSSGILLGFLGGYMFYVFIQKYNIIIDQFTFYCIVINFAIVGTIATFYTKGIPIIVTQTYNIATSVILAWQLSHFNDWTAWTLLVLLALYDLCAVLTPCGPLKALINLMQREDSPSMPGLLYEARLPEGVTRPGNAATKRNKVSKENNNEAPNNSGEHNSHSTKDSRQKKSTVDN-----IEHVQKKGQFK----TIQPNDIFVNNQNTTSEHFPNDVSNPAVETGSLPFAICKIYKLQVDKENCPQFI----------KEKYHPTELADMEPSDRPSYTPAELKTEIQVLYPRSGGRIVVETPEEGDEASQRK-------RRRYNGEGLTR---YIVMDRNGEVRRVLVMKDTGKVYEELSGSDLETKSAEQSNLNDTIKLGLGDFIFYSVLVSKAALYSFTTFAACTLSILAGLGGTLVLLSVYHAALPALPISIFLGVIFYFTTRALVEPWIENILTVPFY 1018
BLAST of mRNA_P-littoralis_Contig150.57.1 vs. uniprot
Match: A0A448Z5G0_9STRA (Presenilin n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5G0_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.530e-58 Identity = 197/564 (34.93%), Postives = 265/564 (46.99%), Query Frame = 2
Query: 701 YSANSFMAVVKPVTLCMTLSALITVSLYKD---AEGATNSALSVYEVYDAS-ANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWXXXXXXXXXLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAVVGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALYDLCAVLSPIGPLRALVNLMQEYEEP-MPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVNGVGIEEEGGEGVLGVWARGGETGRGGRVQERGGXXXXXXARPQSSPAEXXXXXXXXXXXNDSXCXXXXXXXXXXXXXXXXXXGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALERXXXXXXXXXXXXXXXXPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGE--RESASRXXXXXXXXXXXXXXXXXXXXDEEGV---SIKLGLGDFVFYSVLVSKAALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLTRFSIQPYVEALNDTPLY 2362
YS++SF A+V PV++ M LSAL V + + A+GA + A + Y+ +D S A+ LD + SL+N I+V + T IV L+GYM +S LLG +GG +W A++++ LP D TY LWNFA VG++AIFY KG+ ++Q YLV TS+I+AW LS FD+ W LL +LALYDLCAVL+P GPL+ALVNLM + + P MPGLLYEAELP R XXXXXXXXXX + + A GGE RV+ P + N S +G+ +F S AD +E + W +D +G ES+S +EE + SI+LGLGDF+FYSVLV+KAA Y FTT+ C++VI+ GLG TL+LL+V+ ALPALPISI LG FY++TRF I+P++E + P Y
Sbjct: 88 YSSSSFYAIVVPVSITMVLSALAVVFINSESIMAQGAASMA-ATYQYFDTSGASALDAILL----SLLNGLIMVTXIGGFTFVIVLLYKFNCMWLLIGYMMFASTSLLGFLGGHLWLVAIQLYDLPVDKFTYIMVLWNFAAVGILAIFYGKGVPKYISQAYLVLTSVILAWHLSFFDDVMAWSLLFMLALYDLCAVLTPCGPLKALVNLMSKDDAPEMPGLLYEAELPPEARRPGSSSTSQNYAGVNSSRSXXXXXXXXXXVSESSRATS----------------ATGGEL----RVELPLAVAQVYNLSVLDVPEQSRGLFSTSSSSNGSDQPLL--------------------------DGSIENQNFEIPENPSKKQLKADIIVELPVNGGRIERIRRKGKTVFMERNRHGDPKRILW-------------VDRKGRVFAESSS--------------YGEGDDDEEEDLGRNSIRLGLGDFIFYSVLVAKAAEYSFTTFMVCMLVILAGLGGTLILLSVFHHALPALPISICLGIFFYIVTRFLIEPWIEGIMIKPYY 573
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LTV7 |
| Preferred name | PSEN1 |
| PFAMs | Presenilin |
| Model size | 3330 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K04505,ko:K04522,ko:K06060 |
| KEGG Pathway | ko04310,ko04330,ko04722,ko05010,ko05165,map04310,map04330,map04722,map05010,map05165 |
| KEGG Module | M00682 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000041,GO:0000045,GO:0000122,GO:0000186,GO:0000323,GO:0000775,GO:0000776,GO:0001501,GO:0001505,GO:0001568,GO:0001654,GO:0001666,GO:0001708,GO:0001754,GO:0001756,GO:0001764,GO:0001773,GO:0001775,GO:0001919,GO:0001921,GO:0001932,GO:0001933,GO:0001934,GO:0001942,GO:0001944,GO:0001945,GO:0001946,GO:0001947,GO:0002009,GO:0002027,GO:0002036,GO:0002038,GO:0002119,GO:0002164,GO:0002244,GO:0002252,GO:0002253,GO:0002263,GO:0002265,GO:0002274,GO:0002275,GO:0002283,GO:0002285,GO:0002286,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003143,GO:0003407,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005640,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005790,GO:0005791,GO:0005794,GO:0005798,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005929,GO:0005938,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006486,GO:0006508,GO:0006509,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006825,GO:0006836,GO:0006839,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006903,GO:0006909,GO:0006914,GO:0006915,GO:0006928,GO:0006936,GO:0006941,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007033,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007175,GO:0007176,GO:0007219,GO:0007220,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0007507,GO:0007548,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007626,GO:0008013,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008283,GO:0008284,GO:0008306,GO:0008324,GO:0008406,GO:0008544,GO:0008593,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009952,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010453,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010942,GO:0010958,GO:0010975,GO:0010976,GO:0010977,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0015031,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0015630,GO:0015677,GO:0015695,GO:0015696,GO:0015833,GO:0015871,GO:0016020,GO:0016021,GO:0016043,GO:0016048,GO:0016055,GO:0016079,GO:0016080,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016324,GO:0016477,GO:0016485,GO:0016787,GO:0017015,GO:0017156,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019866,GO:0019867,GO:0019904,GO:0021532,GO:0021537,GO:0021543,GO:0021782,GO:0021795,GO:0021870,GO:0021885,GO:0021895,GO:0021904,GO:0021915,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022404,GO:0022405,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030001,GO:0030003,GO:0030016,GO:0030017,GO:0030018,GO:0030030,GO:0030054,GO:0030097,GO:0030099,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030165,GO:0030182,GO:0030318,GO:0030323,GO:0030324,GO:0030326,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030587,GO:0030659,GO:0030667,GO:0030900,GO:0031090,GO:0031149,GO:0031150,GO:0031154,GO:0031224,GO:0031226,GO:0031293,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0031344,GO:0031345,GO:0031346,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031594,GO:0031674,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032091,GO:0032092,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032890,GO:0032892,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0033158,GO:0033160,GO:0033267,GO:0033554,GO:0033619,GO:0033673,GO:0033674,GO:0034205,GO:0034220,GO:0034641,GO:0034645,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035220,GO:0035222,GO:0035239,GO:0035253,GO:0035282,GO:0035295,GO:0035333,GO:0035577,GO:0036064,GO:0036211,GO:0036230,GO:0036269,GO:0036293,GO:0036303,GO:0036477,GO:0040011,GO:0040028,GO:0042058,GO:0042059,GO:0042063,GO:0042110,GO:0042119,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042303,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042391,GO:0042461,GO:0042462,GO:0042500,GO:0042582,GO:0042592,GO:0042633,GO:0042659,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0042982,GO:0042987,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043011,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043170,GO:0043198,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043299,GO:0043312,GO:0043392,GO:0043393,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043413,GO:0043473,GO:0043523,GO:0043524,GO:0043549,GO:0043588,GO:0043589,GO:0043603,GO:0043949,GO:0044057,GO:0044070,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044449,GO:0044459,GO:0044463,GO:0044464,GO:0044671,GO:0045055,GO:0045121,GO:0045137,GO:0045165,GO:0045176,GO:0045177,GO:0045184,GO:0045202,GO:0045296,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045732,GO:0045747,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046530,GO:0046649,GO:0046822,GO:0046824,GO:0046873,GO:0046903,GO:0046907,GO:0046983,GO:0048066,GO:0048143,GO:0048167,GO:0048190,GO:0048286,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048708,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048837,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050435,GO:0050673,GO:0050730,GO:0050732,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050806,GO:0050808,GO:0050818,GO:0050820,GO:0050839,GO:0050851,GO:0050852,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051336,GO:0051338,GO:0051340,GO:0051347,GO:0051348,GO:0051352,GO:0051402,GO:0051438,GO:0051444,GO:0051563,GO:0051580,GO:0051582,GO:0051588,GO:0051590,GO:0051604,GO:0051606,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0051960,GO:0051961,GO:0051962,GO:0051966,GO:0052547,GO:0052548,GO:0055037,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060047,GO:0060048,GO:0060070,GO:0060075,GO:0060173,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060998,GO:0060999,GO:0061053,GO:0061062,GO:0061097,GO:0061099,GO:0061136,GO:0061371,GO:0061458,GO:0061900,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070001,GO:0070011,GO:0070050,GO:0070085,GO:0070201,GO:0070482,GO:0070588,GO:0070765,GO:0070838,GO:0070887,GO:0070925,GO:0070997,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090087,GO:0090092,GO:0090287,GO:0090316,GO:0090596,GO:0090647,GO:0090702,GO:0097028,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098609,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098687,GO:0098771,GO:0098773,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098857,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099120,GO:0099177,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0106027,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0140029,GO:0140096,GO:0150034,GO:0198738,GO:1900006,GO:1900180,GO:1900182,GO:1901135,GO:1901137,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902041,GO:1902042,GO:1902043,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902903,GO:1902905,GO:1903050,GO:1903051,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903522,GO:1903789,GO:1903793,GO:1903827,GO:1903829,GO:1903844,GO:1903959,GO:1903961,GO:1904589,GO:1904591,GO:1904645,GO:1904646,GO:1904796,GO:1904797,GO:1904951,GO:1905037,GO:1905114,GO:1905906,GO:1905908,GO:1990535,GO:2000026,GO:2000058,GO:2000059,GO:2000060,GO:2000112,GO:2000113,GO:2000272,GO:2000677,GO:2000678,GO:2001023,GO:2001025,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238 |
| Exons | 10 |
| Evalue | 4.44e-171 |
| EggNOG OGs | KOG2736@1|root,KOG2736@2759|Eukaryota |
| Description | subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors |
| Cds size | 1857 |
| COG category | O |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01002 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789718.032667-UTR-P-littoralis_Contig150:232600..233562 | 1680789718.032667-UTR-P-littoralis_Contig150:232600..233562 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig150 232601..233562 - |
| 1680789718.1457484-UTR-P-littoralis_Contig150:243760..244271 | 1680789718.1457484-UTR-P-littoralis_Contig150:243760..244271 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig150 243761..244271 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789718.045812-CDS-P-littoralis_Contig150:233562..233667 | 1680789718.045812-CDS-P-littoralis_Contig150:233562..233667 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 233563..233667 - |
| 1680789718.0544362-CDS-P-littoralis_Contig150:234332..234479 | 1680789718.0544362-CDS-P-littoralis_Contig150:234332..234479 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 234333..234479 - |
| 1680789718.062838-CDS-P-littoralis_Contig150:235188..235235 | 1680789718.062838-CDS-P-littoralis_Contig150:235188..235235 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 235189..235235 - |
| 1680789718.0742536-CDS-P-littoralis_Contig150:236168..236916 | 1680789718.0742536-CDS-P-littoralis_Contig150:236168..236916 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 236169..236916 - |
| 1680789718.0836935-CDS-P-littoralis_Contig150:237544..237656 | 1680789718.0836935-CDS-P-littoralis_Contig150:237544..237656 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 237545..237656 - |
| 1680789718.0943656-CDS-P-littoralis_Contig150:238476..238544 | 1680789718.0943656-CDS-P-littoralis_Contig150:238476..238544 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 238477..238544 - |
| 1680789718.1042535-CDS-P-littoralis_Contig150:240227..240445 | 1680789718.1042535-CDS-P-littoralis_Contig150:240227..240445 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 240228..240445 - |
| 1680789718.116819-CDS-P-littoralis_Contig150:240890..241003 | 1680789718.116819-CDS-P-littoralis_Contig150:240890..241003 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 240891..241003 - |
| 1680789718.1264548-CDS-P-littoralis_Contig150:242229..242413 | 1680789718.1264548-CDS-P-littoralis_Contig150:242229..242413 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 242230..242413 - |
| 1680789718.1360888-CDS-P-littoralis_Contig150:243645..243760 | 1680789718.1360888-CDS-P-littoralis_Contig150:243645..243760 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig150 243646..243760 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig150.57.1 >prot_P-littoralis_Contig150.57.1 ID=prot_P-littoralis_Contig150.57.1|Name=mRNA_P-littoralis_Contig150.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=619bp
MASTIPVDNSTTDSGAPEESRTPLLEDGRLRSQSQGSTGGGEENAFADDG GDSSGALDQADVAYSANSFMAVVKPVTLCMTLSALITVSLYKDAEGATNS ALSVYEVYDASANPLDPSTVRLGKSLVNAFIIVLVLAAATVFIVWMYWMR CMRCLVGYMAMSSAVLLGVMGGAVWGSALEVFQLPCDAVTYYGGLWNFAV VGVIAIFYQKGISTVVTQGYLVATSIIMAWQLSRFDEWTGWCLLVVLALY DLCAVLSPIGPLRALVNLMQEYEEPMPGLLYEAELPAGPPRRRSRPPGSS GAQSTSPPPDRDEEGFATGGGGGAAGVNGVGIEEEGGEGVLGVWARGGET GRGGRVQERGGGGGGGVARPQSSPAESSGAGRGGGTINDSSCNVSAAEAA TATATATATTGDGHTSGSRGKEGAGRVVDFHASPRSSGNTSAADTALERR AAAAAAAAAAAASGSPSSRKGGRSGSASQRWFGEGSLEDGSASLIDSRGE RESASRRRRTRRRKRYTIRKEEDQDGDEEGVSIKLGLGDFVFYSVLVSKA ALYGFTTWAACVVVIVFGLGTTLVLLAVYRMALPALPISIGLGTVFYLLT RFSIQPYVEALNDTPLYF* back to topmRNA from alignment at P-littoralis_Contig150:232601..244271- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig150.57.1 ID=mRNA_P-littoralis_Contig150.57.1|Name=mRNA_P-littoralis_Contig150.57.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11671bp|location=Sequence derived from alignment at P-littoralis_Contig150:232601..244271- (Pylaiella littoralis U1_48) CCCTCCCTGCCTCCCTCCCTCCCTGCATCACCTACAGCAGCAGTGCTTTA
CAGAATACCTTGCCTTGGGGCACCTGGTAGTGTTAGAGGAGGGGACGAAG
AAGAGAGCGCAGATATTGACCGTGTACCGAACTACAGAACTCCTCCTGTG
GAAAAAGGACAGCATGAGCAGTTGAGAAGGCGGCCGAGACAGAGAGACGA
CAAGAGGTGGAGCAGAAAGCGACGGAGATAAGAAAGCGAAGCTGGAAGAA
GAGGAGCCGAAGCGTGCGAGTGTGCAGAGGTCGAACACGGCTAGATCCGT
GTTGACTAAACCTGGCTCCGTCCCCGTGGCGGCAGGCAGAAGGATTGATC
AGCAGCGGCGGGTGAAACCCGCCTCGTCTCGCAGCAGGAACAGCACTGAG
AACACTCCGCTGGTGACAACAATACCAACCACATCATCAACACCACCACC
ACCACCACCACCGGCCCCGACACGCCGTATACGTAGCTCTAGCTCTACCA
CCACCAACAGCATGGCATCGACCATCCCGGTGGACAATAGTACTACCGAC
TCGGGCGCACCAGAGGAGTCGCGCACGCCTCTCCTGGAGGATGGCCGTCT
CAGAAGCCAGTCCCAGGGATCTACAGGTGAATATGCATTGTATGATATGA
TACTGCTGTACCGTAGAGTTTTTCGTGCAGGGTCGCCGTGTTCTCGACGA
TGCACAGCAGTATGTACACACCGCCGAACGCCGCCCCTGCAAGATGCGAA
GCTCGCTTACTCCTCAAAAGTAGAAGGCGTGTCGGTGCTGCCGTGTTCTA
TCATACGTATATCTTCGAGAAGTATTTTTTTTTTGTTCCGGCAACATCAT
CAGGTACAGCGCAGCAGCAGCGTATTTACCGGTATGATAAGTCTCCCCCT
CGACAGGATTTATAGAGTAGATTAGATTTGGGGGTACTACTACTGTGAAG
CTCTCCGAAAGCGTCAACACCGTTTTGATGGTATTACACGATCGATCGGC
CCCGGGGATGTGGTACCGTATCTCATGCGACCTCCGGTACGGTAGATGAG
GCATCGTGGGTTCATCACCAACCCCGCCGTTGGTGCCACAGCAGACAGAC
CTGGAGTGCTCATGCCAGCTTTGCCTGAATGTAAGCTATTCACGGAGAGG
AACTGCTGTTACATCATGAGGGGGGCGCGATATCAATCGTTCCTCAACGC
TGTCCCCCCCCGCTTATAATGTTTTGCCACGTCATGATTACAGCACGTAC
ATACACCAGCGCACGGTCGCCCCGGTGGTTCAGTTGGTTTTCCACGTAAC
CTTCTGACATTCACGCGTGAGTTCGAATCCCAGTCCAGTAACACGATCTG
GGTTTTCTTCTCACAATGCGCGTGAAAGTGGAAAGCGATTAATTCGTGAG
TAAACATAATTCGATCGTACCATCGACGAGGGAAAGGGATCGCTGTCCCC
TTTCTCGCGATAAAAGCTCAACCAAACAACAAAGGCAAGCACCGCAGAGG
GAAGTGGAGAAAAAAAAAAAAACTCCTGTGTTGACTTCCCCCTGTGTGAC
CCCAGTTGGAGCGTCGACCCACCCGAAAGGTGCAGAGTGGCGTCCAATTA
AAGGGATGACAACACACAAACATACATGCATATGCCGACCAATTTTACCC
CTCTGCTGCCGTCTGTCTGCCTCTAAAGATCATCATCAACATTTCTCATC
TGTAGCATTGCAGCAATAACTGTACCACCAACACCAACACCAACACCAAC
ACCAACACCAACACAGCACTCGGCAGCAGCAGCAGTGGCAGCGGCGGCAG
CGTAAACACTAGCATCAATGCTACCTACCCGCCGCCGGTTCCCTCCCCCC
CCCCCTAGGAGGAGGAGAAGAGAACGCCTTTGCCGACGACGGCGGCGACA
GCAGCGGTGCCTTGGACCAGGCGGACGTGGCCTACAGCGCCAACTCCTTC
ATGGCGGTGGTGAAGCCGGTGACGCTGTGCATGACGCTGTCCGCCCTCAT
CACGGTGTCTCTGTACAAGGACGCGGAGGGCGCGACGAACAGGTATGTAT
TTATCATCTTCGAGGATTACTGGAGTATGTCGGTGAAACTTCCCGGAGCA
CGCGCGTGGAACACTTCCGTCGCGGGTCATGATTTGTTGTGCGTATGCCC
CGGTCGGTGCAGCTGAGGGGGGGCAGCCGCAGTGCCTTGTTCGACCTCTT
CGGCACTTGCGTGAGACTGCTGTTGAGGTCAGCGCTGTCAGCGTTCCTTC
CCTGCATGTGCCATACTGTTGTGATACCGCATGACCAACAACCAATGTTT
TGACAATGCATGGTGGTGTGCAGGGGGTATTTTCGCAACAGGAGTTTGTA
CCGTGCGTACCTCGTTGGTCGCCCCGGTGGCCCAGCTGGCATTTTGTCGA
AGCTTTGACATGTTGTTGACAGCTAGATCGTTGGTTCGAGTTTCGGCGAC
GTAGAATTTTATTTGTGCACAATATACCCGAGTGGAAGGCGATTATTTCG
TGAGTGAAAACAAATCTGACCCGAAAGAAACTGATGAGGGAGAGGAAAGG
GACGACCGAACCCTGCCTTCTCACGATAAAAATGAGGCAATGGCACCGCG
CAGGTAGATTCGTGGAGAAGTAACAAGAAAATATAACCCCTGTCGTTACC
TATCTCTTGTCTATCGTGGCCCTGGGTGCTCCGCCCACGTCTAAGCAACA
GGTTAAGAATGGCGTCCAGAATCGGTGGTAAAATAACACACACACACAAA
TATCCTCACCACACGCGTACGCGTGGCGGTCGAAGCAGCATATCATAGCA
GTTACATACGAACACTCGACAAAGCTACGGGCGTAACGATGCGCAACGGA
TGTTGTTTTTCCTCGACCACCTCACACTCTCCTCTCCTCACCCCCCCTCC
CCCCGCGTTTCGCAAGAAGGGAAGATCGTAAGACATGCTAGATTGTAATG
AACCAGCGTGCGCAACATGATATCTATCACACGTCAAAAACGTTTTCTTG
GTACTGTACAAGGAGCGCCCAGACATTTGTGGCGACCCGACTCTTTTGCT
ATGAGCAGGGACGGTGCTATGTCGGTCTCGAAAGGAACATATATTGGTGG
GGGTCAAAGGTGGTGTCGCTATGGTAAGGCAAGGCAAGGCAAGGCAAACA
CATACTGCCCCCCCCCCCCCCCTTCCCCCTACTTCTTCTCACCCCCCCCC
CCCCCCGTCTCCGCTCCGCTGGATTCATTTTTCCGGGGGGTCATGCCGTA
TATTTACTCATACAAAAGCGCGCTTTCAGTGTACGAGGTCTACGACGCGT
CTGCGAATCCCCTCGATCCCTCCACGGTGCGCCTCGGCAAGAGCCTGGTC
AACGCGTTCATCATCGTGCTAGTGTTGGCGGGTACGTGAGAAAGCGACGG
CGGCGGGGCAGGTGCAGCCGTAGGGGGAGAGGGGGGGGGCGGGGGGTTCG
TTCTCGTGTGTGTGTTCTGGGTAGGATACCTGCAGTACCGTACGTACGTA
GGTTGCGTACATACGAGCTGTAGTTTTTATTTTATTTTTGTCAGCGATCC
TCCCCGAGTCACTGCTGTCGCTGGCGTGTGTTCTTGGTGCCTGTCTGTCT
GTCTGTCGCTCTCTGTCTGTTTGGCTGCATGTGTGCCTGTCTGTCTGCGC
GAAACTCTCTCTCTCTCTCTCTATCTCTCTCTCTATCTCTCTCTCTCTCT
CCCTCTCTCTCTCGGCCTTTCTCTCCTTCTCTCTTGCTTTTTCTCGCTTT
CTTGCTGTCTTAATCTCTCGCTCTCTATGCGCTCTCTCTCCCCCACCCAC
CCCCGACCTGTCCGCGGTACTTGCAGCCGCGACTGTGTTCATCGTGTGGA
TGTACTGGATGAGGTGCATGCGCTGCTTGGTGGGCTACATGGCAATGAGC
TCGGCCGTCCTGCTAGGGGTAATGGGGGGCGCCGTGTGGGGCTCTGCCCT
GGAAGTTTTCCAGCTTCCCTGCGATGCGGTGACGTACTACGGGGGGCTGT
GGAACTTTGCAGTCGTGGGTGTCATCGCCATATTTTACCAGAAGGTGACT
CTCGTGGTTGTAGGTTTGTTGCTGTCGCTGTTGCTGTTGTTGTTGCTTGT
TGTTGCTTGTTGTTGTTGTTGTTGCTGGTTGGAGGCACTATCCTTGAGGA
TAAGGCCCTTGAGGGCACGACCATTAAGCTGCTACTTCATGTGTTCTGAA
GGGTAGAGTTGTTGCTGTTTGGCGGATCTGCCACGGTTTTTACTGTCCTT
GGCACATGTGGGATCATTGTCGTCGTGTGATAAGTTTCATGCCGCCTTCT
CTCCCTCCCTACCATCGCAACCGCCTCCCTCCCTCCCTCCCTATAAATAA
GGAAAGCTTGGCTCTCCTCGAACTACGTGCTCTGTCACGATTTTGCGTTT
TCATGGCACACGGCAAGCATTTCCCGTGTGAATAGTTTCGCCCCCCCTCC
CTCCTTACTTTCTCAACACCCCTCTCGGCTCTTCTTGAACTCCCCGTCAT
GGTTGCCTTTTGTGTGATAAACCATACCCCGTATATACTCCGTACGTATG
GTAAGTATTGTTGATCACATTAGCTCATCGCCAAAATCTAGCCCGTGGTC
ACAAAAAGTACTGAGCTCTAGGAAGATCCAAAAAACAGAAGCTACTCCGG
AGTACAAGGGAATACCCAAGAAGGACCGAAGAAGATACACCTTCCTACGC
GGTGTGCATCACTGAACTACAGCAGTCACAGCAGTACCAACATCAAACGT
ACTTCCAGCGTCGTTCATTTGACTACAGCATCGTGTTCAGTCTCCTCCCG
CCCCACTTATAACTAATAACCTGCTGCTACAAGCAGTCAGTAGGTAGCTG
CAGACTACAGCAGTTAGTTGCTGTCTGGAGTGCTGCCTGCAACGTACAAG
TAGCCCCGGCAATCGGAGAAGACAGAAAAAGAAAAAACACAAAAACACGC
ACGTATCATCAGATGTTGTCGAGGATGGTGTCTCCATGCCGTCCTTGCGA
CGCTGGTGATGATGTCGACCTAAACATGTCCTCCTTGTCTGGGTCCACGT
TGCTGTTGGCGTTGCCCAAGGCCACATCACCAGCACCATGCTCTCGTAAC
GCTTCTTCACTGCCGGCGCTGCCTTAGGTCACCTCTATCACCGCCGCTCT
CTCACATAACAGCTCTTTCTTGTTGTTCCTTTCCAGTCAGTAGTCGGTTC
CCTAAAAAACTCCACTGTGCACTTGAGGTACAAGTCTTCTGAAAAAAAAG
TTCACGCTCGGAGTGAGATCGACCAAGCTCTTCCCCGTTCGTCGCTGCTC
GTCTACCTCCGTCCTTGGCTGCGAAACTGGTTACTGGACGGCACAATTCA
TCTGTGCATCCTAGATCGTACCGTCTTTTCACCTATGGTGTCGCCTGCCT
CCGGGCACAAATGCTTGTGATGTACATTGCTGTACTGCCGCTGTAACCAA
AAGGCCCGCGAATCCGCACATTTGCACCTGGCACACCAACTGCGACCCAA
CTCTACCGCCACGCCCGCGGCGTTCGACCACAGCGCAGCAGCAAGAAGGT
ATAATCACTCCTTGAGGGTGAGTCCGGCCTTACACCCGCCAGAAAGACCC
CCCCAACTCGCTTTGGGTCATGCTTACAGCAGACCTTGCCTAGGCAGCGA
GGGAACGGAGAATTAAAAGTATGTACGGTACCAGGTATCTCACACGCGTA
TGTATGACGACTGTCTTTGATTTACAGGGAATATCGACTGTCGTAACACA
AGGGTATCTGGTGGCGACGAGCATTATCATGGCTTGGCAGCTCAGGTGCG
AAAGAGAAGTTATTTCTCGCTTGCTTTTTTTTTTTTCTTTGTCGTCACTG
CAGCCATAGGCACTCGCTTCACGCTTTCGTGCGGCTGCTTATCGCGAAAG
GGCGACAGGTTCGTTTTTCATCATTTTAGTTGCTCTTGTCGATGCAGGCT
CTGGGCTCTCTCTCACCACCTCGTACATGACTGGTTATCTTTGTGTCAAA
AGAGACACTTTTTGTGTGCGTTTCCTTTTTTCGTTTTTTGTAAAGTGCTG
GGCTCTCACCATCACGTGTACTTTTCCTCAAGTATGAAGACGACTGCTGC
TGCTGCTGCTGCTGCTGATGTTGTGCGTAACAAAGCGCAAGGTTCTGTTC
GGGTTTTTTTCGGCCTTTTTTGTCGACGCGGGCCTTTCACCACAGAGGCT
TATATGTGTTATGTACGTTGTCTACTGCAACTGCTACATGCTTTTGTACG
TGTTTGATACGAGAGCGCCAGGTTTTTTATCGGGTTTCGACGCCAATGTA
CTCATATCCATCTGTACCGGGCCATGTGTGTTGAAAGCTGGCCTTTTTTT
CTCCCCCTAGACTTCGTGTCTTTTTCCCTGCCGTGTCGCCAGAGACCCGT
CGCCCCCCCCCCTTGTACGTGTTCCTCTGCAGATATTCCCCCCCTTCACC
TTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGCGCGCGCTC
CTCGTTTTCGAACGCCTCCACTGCGACACCCGTTGCTACATCGGCACAAA
CGGACTGCCGTGGCGTATCAACCACCACCCCGACGACAACAACAACGGGA
CTGTCAACACCAAAGCCGATTCGACGAGTGGACCGGCTGGTGCCTTCTCG
TTGTCCTTGCGCTCTACGACTTGTGCGCGGTGCTATCCCCCATCGGTCCA
CTAAGGGCTCTCGTCAACCTGATGCAGGTCAGCTTAGCGCTGCCGCCACA
TGCATGTATAAGCAAACTGGATCGTGCACCTTACAAAGTACGTCATCCCC
CCCCTCAAGTTGGCCGACGTTGAAGGCACTATAACTCCACGTCAAGAAAG
AAGAATCTCAGTACCCCAACACTGGTTTTCCATGATTTAGAAAGTCGCTG
CACAGAGCTGTCCGGAAACTCGCACGTCGTTTGGTTTTGGGGAGATCTCC
AGTTCGGGGGTGGGGGGGGGTAGGGAGCGTAATATACCTCCGGTTGTTTT
CGGCGTACGACGGGATCCCTGCCCCCCCGGTCTTGTCCGGCCGGTTTTCG
AGACGTCGATTATTGCTACTGCTCTGCAGCGGCTCATCAGATTAAAGAGA
GACGTCGACGATTGCGATGAAATATTTTTTTAAAGGTGTTGTTGTCTAAA
GAAACGCTTGAAAAAGTACTTCGTTCGTTCGTCCCTTTCTGAGTGTATGA
TGGCAGCCATTGCCGAACCAGGATAAAAAAAAGAGAAAGCCCACACGCAA
CCCGCCGCACGAGTTTCCTCCTCTTCTACGAGTGGCGTGATACCATGTGG
AAGCTAAAAAGTGCAGTATGTCTCCACAACCCCCCTCCCCCCCCCCCACC
CACAGGAGTACGAGGAGCCGATGCCGGGCCTCTTGTACGAGGCGGAACTT
CCCGCGGGGCCCCCACGCCGACGCTCCCGCCCTCCTGGAAGCAGCGGCGC
TCAATCTACGTCGCCGCCGCCCGATCGCGACGAAGAAGGTTTTGCTACTG
GAGGTGGCGGCGGGGCGGCGGGGGTTAACGGGGTGGGCATCGAGGAGGAG
GGGGGGGAGGGGGTTCTGGGGGTGTGGGCGAGGGGGGGAGAGACAGGGAG
GGGTGGACGAGTACAAGAAAGGGGCGGCGGCGGCGGCGGCGGTGTGGCTC
GACCGCAGTCATCCCCGGCCGAAAGCAGCGGTGCCGGTCGTGGTGGTGGC
ACGATCAACGATAGCTCGTGCAACGTTTCCGCAGCAGAGGCAGCGACTGC
GACTGCGACTGCGACTGCGACTACGGGCGATGGTCATACCTCCGGCAGTC
GCGGCAAGGAGGGAGCCGGACGCGTCGTTGATTTTCATGCCAGCCCGCGT
TCGAGCGGGAATACTTCTGCGGCAGACACTGCTCTCGAAAGAAGGGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCAGTGGCAGCCCTTCCTCTC
GAAAGGGCGGGAGAAGCGGCAGCGCATCTCAGCGTTGGTTCGGAGAGGGG
TCCTTGGAGGACGGGAGTGCGTCGTTGATCGACAGCCGGGGAGAAAGGGA
GAGTGCGTCTAGACGAAGGAGAACAAGGAGAAGAAAAAGGTATACCATAC
GAAGTACCTCTACACATATTTTAATTCGCAAATATTTAGATGTTGTTGTT
TTGTTTGTGTCGCACTTTCTGTTTTGGTGCGCATTATTGGAACTCTTATC
ATATCAGATCATGCAGCTATGATACCTGGTACGAAAAAGATTGAGTTTAT
GTTCTGTTCTGTTCAGTTCTGTTGTTCGCCGTCCGCCTGCCCGTGAAACT
TACACGCTAGCGTGATGGGATGTCGAGATATTTTATCTACTGTAGGGAGG
TGCGATATCCATCGTTTGTACATGCATAAGCCTCTCTTGTTTATTTCGAC
CCGCGCTCATCGGTGTGCCGTGCTCCATGCGCCCCATGCGGCACGCCGTG
GCGTGTGTATTTGTATCTTCCCGTTGCGACCACCTTGTGTTGGACCGCGA
CCCGTCGGTATCGGTACAGCTGGGCGGAGTGGAGGAAAGCGGTAAATGAC
AGCACTACTATCATAGTAGTTTTTTTTTGTGCTGTCTACAGGTCAACGTA
TCACGCGTCGCCTTAGCATATGGATACACCCCCACTGCGGACCAGAAACC
ACCTTCAAGTCGATACTTGTTGCAAGAGCAATACGACAGCAGCTGGTGTG
CCCTACCGTTACAGGAATATGCTGTAAAAACAGAAGGATCTGTGCCAAGC
ATGGCCCTCCCTGGCATTAGACGAGCTGCAGACAAACGATCAACCGTCGT
AACTTCTCGCCGATATTTTTAAGCGTGGCCTCCTTGGCGTGTACGATGCA
GGCATCCTACCATATGGGCCCTCGGTCTGTAGGAGGGTGCACGAAATACC
TGTCACCTACCACATACCGCCCCCACCCTCATCCCCAATACCGTATCACC
CGCCCTCCCGCTTGATGGGACGGACTCCTTTAGGGCGGCAGCACCAGCGG
CAGCGGCAGCGGCAGCACCGGCGGAGGAGGATGAAGAGGAAGAAGACCAA
GACGGGGATGAAGAGGGCGTATCGATAAAGCTCGTGAGTGTCCCTATCGC
TACTTGTATATCTCTTGCTGTTGGGCCTATGCTCGGGTGGGAGGCGGTGT
ATGACCTGATGCGTGCACGCGGTACAGCAGTATGAGTAGTGAGGCATGCC
GATAAAGAAATTTTTCGACTTCGGCTTTTTTTTTTTTTGTGCGTGTGTTT
TTTGGTTTGATCAGGGCGTGTTACTTTAGTTTGTTTTTATTTTATTTCGT
GGAGGAGAAGGGCGTGTAGATGGAAACAATTTTGTGCTTTTAGGTAGTAT
CTTCCGGCTTTAGCACTTTCGTCTCACGCGCAGGGGCTCGGGGGGAGCGA
CATCAGCAGCGCAGCAGCAGCAGCTGAAAACAGCAGCACACGAGGTCCAC
TTCGACTTACTATGCTCACAACGCTACATATTAAAAATTCTCGCACCGTA
TTCTCTGAGTTTTACGTCAAGCGGTATGCCTCGGAGCATGAGTGGTATTG
GTTTCCTCCTGGCGTTGGCTCGGAGAAGTAGAAGAGGCAGCTGAACAGCA
GGAGCAGCAGGAGCAGCTGCAGCACACGACGTCCGAACAAGCAGTAGTAC
ACAGAGATCCATGTAAACTCGACGTCACCCACAAGGTAGTTAGTACTGTA
TTCATGATATGGTACGCCCTTTCATCAAGATCATCATTTCGTCTTCCGGC
TTTTTGCTGTTGTTGTTGGCGGCGTCTTTGGCCATCTTCCAGGGACTCGG
AGACTTCGTGTTTTACAGCGTCCTCGTTTCCAAGGCCGCGCTTTACGGCT
TCACCACGTGGGCGGCGTGTGTTGTGGTCATCGTCTTCGGACTGGGGACG
ACTCTCGTGCTGCTAGCCGTCTATCGGATGGCCTTGCCGGTGAGAAGGAC
TGGTGTGGTGTCGGGTTGGTTGCTGCAGTTGAGTGTTGTGATGGTGGTTG
TGGTAGCGGCGGCGGCGGCTGGGTGTTGGTCGTTGTTGCCGGAGGTGGTG
GTGTTGGTGGTGGTGTTGGTGGTGGTGGGTGTGGTTTTTGTTTTCTGTGA
CAAGTATTGTTGTCTGCAAACGTTGTTTGCTTTTGTTCTCCTTGTTTTTT
TTTTTTTTTTTTGTTCTATTGTTTGTTATTTGTTGTTGATGTTTGTTGTT
GATGTTGTTGTTTGTTGTTGATGTTGTTGCCGCTGCCGCTGCTGTGCTTG
CAGTCTAGGTGGTAAAGAGAAGGAACGGCACTCCTACCGGTACAAATCAC
GTCGAACAATACCTCGAAAGTACGTCCTTGATGATGCCAAATTCGTTTTT
TCTTTCACGCTTCGCTGTGTGCTTCTGCGTGTTCATTTATTGACCGCTCG
GTCGAGCGCAGCCGTAGGCGGCGTGTGATCGCATCTTGTTCGTCACGGAC
GACTGTTTTTCCCCTCTCACGCCCACGATTTGGTGAGAACCGTTAAGATG
AGAGCACATCTCATGTCGTGTGTGTGTCGACAGGGTATTTTTTTATTCGT
CTTTCGTTATGCTCCCTCTCGTATTTGCGACTTCCCCTCCCCCCCCCCCC
ACAGGCACTGCCTATTTCAATTGGTCTCGGAACCGTCTTCTACCTGCTGA
CGAGATTCTCGATACAGCCTTACGTGGAAGCCCTGAACGACACGCCGCTG
TACTTTTAGCGGAACCCGCCGGCTCTTGTGGGCGAAGGGGCCCCGGCGAC
GGTGGTAGCGGTCGCCACAACCCCTTCCCAACCTGAAAATCTTTCTTTTT
TTTTCCGGGAAACTCTCGTTTTTTTTTTTTGTTATCATAGACTGAGTGAG
TTGGTGGAACAAGGGAGAGAAGAGCTACGATATAATACCGTGTGTGTGAT
GCTCTGTGAGCAGCATGGTATTTGAGTTGGAACAGGACAAGCTTAAGGGA
TAATGTTTATTATGTATATTACGCTCTGTGAGCAGCATGGTGTTGGGTTC
TCAAAATATTGTAGAATAATATAATAATGACATTTTTATTCCAACGAGGA
GACAGTTTGCAGGCACTTATTCGTCCCTTCGCGAGCGCACGAAACGGCAT
GCTTTGTCACTGGGCATAGGAAGGGCGGGGCCGTAGAGTACACACACAAA
GTGAGATCAAAGCTGGAACGATATTGGCTGCAGTGGCGTATGCTAAAGGT
ACGATGCGCTGCGCGGCGGTGGCGGAGAAGTGCACTCAGAGTTTTCTTCG
GCGGAAGTTTCCCATCGCGAGCAACTGCGGAGCGAGGGTATGATAGTTCG
GTGTGTGTGTGGTTTCTTGACAGACCTGCAAATCTGTATGATACAGCTTA
AGTACATGGCAATAATACAGCTCCCATTCAGAATCGAGACACTGGGTTAG
AACTATTCCGTCGCGTCGTTCGTTCAATTGTTCCTTGATTTCGACAACAC
CCACAGTAGCTCGAGGGTGTTTTTTGAGCCCGCACAAGCTCCAGCTTTTT
CTGGCTTACTTTTTTTTTTTGAGAAAATATGTCCCTGCTTGGAATTGTTT
TTTCCTATTTTTTTTACTGGGAAAAGCGCCTGGGTCCTTGTGTGTCTCGT
ACATGGATTCTTTTTATGTTAATCGTGAGACTTCCAATACATCATCGACC
ATCCACCTTAAGAGATGGGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig150:232601..244271- >mRNA_P-littoralis_Contig150.57.1 ID=mRNA_P-littoralis_Contig150.57.1|Name=mRNA_P-littoralis_Contig150.57.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1857bp|location=Sequence derived from alignment at P-littoralis_Contig150:232601..244271- (Pylaiella littoralis U1_48) ATGGCATCGACCATCCCGGTGGACAATAGTACTACCGACTCGGGCGCACC AGAGGAGTCGCGCACGCCTCTCCTGGAGGATGGCCGTCTCAGAAGCCAGT CCCAGGGATCTACAGGAGGAGGAGAAGAGAACGCCTTTGCCGACGACGGC GGCGACAGCAGCGGTGCCTTGGACCAGGCGGACGTGGCCTACAGCGCCAA CTCCTTCATGGCGGTGGTGAAGCCGGTGACGCTGTGCATGACGCTGTCCG CCCTCATCACGGTGTCTCTGTACAAGGACGCGGAGGGCGCGACGAACAGC GCGCTTTCAGTGTACGAGGTCTACGACGCGTCTGCGAATCCCCTCGATCC CTCCACGGTGCGCCTCGGCAAGAGCCTGGTCAACGCGTTCATCATCGTGC TAGTGTTGGCGGCCGCGACTGTGTTCATCGTGTGGATGTACTGGATGAGG TGCATGCGCTGCTTGGTGGGCTACATGGCAATGAGCTCGGCCGTCCTGCT AGGGGTAATGGGGGGCGCCGTGTGGGGCTCTGCCCTGGAAGTTTTCCAGC TTCCCTGCGATGCGGTGACGTACTACGGGGGGCTGTGGAACTTTGCAGTC GTGGGTGTCATCGCCATATTTTACCAGAAGGGAATATCGACTGTCGTAAC ACAAGGGTATCTGGTGGCGACGAGCATTATCATGGCTTGGCAGCTCAGCC GATTCGACGAGTGGACCGGCTGGTGCCTTCTCGTTGTCCTTGCGCTCTAC GACTTGTGCGCGGTGCTATCCCCCATCGGTCCACTAAGGGCTCTCGTCAA CCTGATGCAGGAGTACGAGGAGCCGATGCCGGGCCTCTTGTACGAGGCGG AACTTCCCGCGGGGCCCCCACGCCGACGCTCCCGCCCTCCTGGAAGCAGC GGCGCTCAATCTACGTCGCCGCCGCCCGATCGCGACGAAGAAGGTTTTGC TACTGGAGGTGGCGGCGGGGCGGCGGGGGTTAACGGGGTGGGCATCGAGG AGGAGGGGGGGGAGGGGGTTCTGGGGGTGTGGGCGAGGGGGGGAGAGACA GGGAGGGGTGGACGAGTACAAGAAAGGGGCGGCGGCGGCGGCGGCGGTGT GGCTCGACCGCAGTCATCCCCGGCCGAAAGCAGCGGTGCCGGTCGTGGTG GTGGCACGATCAACGATAGCTCGTGCAACGTTTCCGCAGCAGAGGCAGCG ACTGCGACTGCGACTGCGACTGCGACTACGGGCGATGGTCATACCTCCGG CAGTCGCGGCAAGGAGGGAGCCGGACGCGTCGTTGATTTTCATGCCAGCC CGCGTTCGAGCGGGAATACTTCTGCGGCAGACACTGCTCTCGAAAGAAGG GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCAGTGGCAGCCCTTC CTCTCGAAAGGGCGGGAGAAGCGGCAGCGCATCTCAGCGTTGGTTCGGAG AGGGGTCCTTGGAGGACGGGAGTGCGTCGTTGATCGACAGCCGGGGAGAA AGGGAGAGTGCGTCTAGACGAAGGAGAACAAGGAGAAGAAAAAGGTATAC CATACGAAAGGAAGAAGACCAAGACGGGGATGAAGAGGGCGTATCGATAA AGCTCGGACTCGGAGACTTCGTGTTTTACAGCGTCCTCGTTTCCAAGGCC GCGCTTTACGGCTTCACCACGTGGGCGGCGTGTGTTGTGGTCATCGTCTT CGGACTGGGGACGACTCTCGTGCTGCTAGCCGTCTATCGGATGGCCTTGC CGGCACTGCCTATTTCAATTGGTCTCGGAACCGTCTTCTACCTGCTGACG AGATTCTCGATACAGCCTTACGTGGAAGCCCTGAACGACACGCCGCTGTA CTTTTAG back to top
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