prot_P-littoralis_Contig150.35.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig150.35.1
Unique Nameprot_P-littoralis_Contig150.35.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 7.780e-55
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct:   79 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 177          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5L610_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L610_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 1.040e-54
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW  IFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct:   33 MKEAIFLRYLWKIIFPGCDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 131          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.030e-50
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct:  478 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 576          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5KHN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN8_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.120e-50
Identity = 83/99 (83.84%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW  I+P  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct:  317 MKEAIFLRYLWKLIYPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 415          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.020e-49
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct:  702 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 800          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.120e-49
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct: 1778 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1876          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.800e-48
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            M EAIFLRYLW  IF  LDVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct:  465 MTEAIFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 563          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.180e-47
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVG T V EDNVGA++LASNPATTPNSK IDI+HHFIRERVARG F+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct: 1006 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1104          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5K862_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K862_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 4.150e-47
Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 0
Query:    3 EAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR 99
            +AIF+RYLW FIFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQRADFLT PLPK+ FCAHRDFVMNIR
Sbjct: 2197 KAIFMRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 2293          
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 6.740e-47
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNI 98
            MKEAIFLRYLW FIFP  DVG T V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQR DFLT PLPK+ FCA+RDFV+NI
Sbjct:  658 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRPDFLTKPLPKETFCANRDFVINI 755          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig150.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZC8_9PHAE7.780e-5585.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L610_9PHAE1.040e-5484.85Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWG1_9PHAE1.030e-5085.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHN8_9PHAE1.120e-5083.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGK7_9PHAE1.020e-4985.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE2.120e-4985.86Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K5L3_9PHAE1.800e-4883.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JMP2_9PHAE2.180e-4783.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K862_9PHAE4.150e-4783.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0K7_9PHAE6.740e-4782.65Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 23..92
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 23..92
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..86
e-value: 3.17386E-30
score: 102.546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig150contigP-littoralis_Contig150:155444..155743 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig150.35.1mRNA_P-littoralis_Contig150.35.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig150 155352..155782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig150.35.1 ID=prot_P-littoralis_Contig150.35.1|Name=mRNA_P-littoralis_Contig150.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MKEAIFLRYLWNFIFPDLDVGRTLVHEDNVGAVYLASNPATTPNSKHIDI
KHHFIRERVARGEFRVVHVRSALQRADFLTNPLPKDAFCAHRDFVMNIR*
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