prot_P-littoralis_Contig15.190.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.190.1
Unique Nameprot_P-littoralis_Contig15.190.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length197
Homology
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BLAST of mRNA_P-littoralis_Contig15.190.1 vs. uniprot
Match: D7FRU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU6_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 8.050e-49
Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 0 
Query:   53 CGWIQKSKPWRTSGQWVLAVRKTMPPAPDLCEWS-----KANKRWRSTIPLWSPYRDDRQWFAAWELGRRLVLTGFLIAVPPDGEGNEHIRAVVAFVLAGVALVVGEVARPHRDPWIYWIYRAGGFIILLMTLAGLLQKVGSSRSNA 194
            C W+ KSK WR SG+ VLAVRK+M P  D   W      + N+RWRSTIP+WSPY+  RQ FAAWE+GRRL+LTGFL AVPP GEG   +R  VA  LAGV+LVVGEV RPHRDPWI W+YR GGF ILL  L GL QK+G++ + +
Sbjct: 1095 CVWLSKSKAWRASGRGVLAVRKSMSPDSD-SSWETTSSKRNNRRWRSTIPVWSPYKAGRQGFAAWEIGRRLLLTGFLTAVPP-GEG--FMRVAVACALAGVSLVVGEVVRPHRDPWIGWVYRGGGFAILLANLTGLAQKIGAADTGS 1237
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BLAST of mRNA_P-littoralis_Contig15.190.1 vs. uniprot
Match: A0A6H5KU24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU24_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 2.140e-44
Identity = 88/148 (59.46%), Postives = 103/148 (69.59%), Query Frame = 0 
Query:   56 IQKSKPWRTSGQWVLAVRKTMPPAPDLCEWS------KANKRWRSTIPLWSPYRDDRQWFAAWELGRRLVLTGFLIAVPPDGEGNEHIRAVVAFVLAGVALVVGEVARPHRDPWIYWIYRAGGFIILLMTLAGLLQKVGSSRSNAVLV 197
            +  SK WR SG+ VLAVRK+M    D   W       + N+RWRSTIP+WSPY+  RQ FAAWELGRRL+LTGFL AVPP GEG   +R  VA  LAGV+LVVGEV RPHRDPWI W+YR GG  ILL  L GL QK G++ + + LV
Sbjct:  419 LSTSKAWRASGRGVLAVRKSMSSDSD-SSWETTTSSKRNNRRWRSTIPVWSPYKAGRQGFAAWELGRRLLLTGFLTAVPP-GEG--FMRVAVACALAGVSLVVGEVVRPHRDPWIGWVYRGGGLAILLANLTGLAQKTGAADTGSPLV 562
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRU6_ECTSI8.050e-4961.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU24_9PHAE2.140e-4459.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:676316..679777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.190.1mRNA_P-littoralis_Contig15.190.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 676316..679777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.190.1 ID=prot_P-littoralis_Contig15.190.1|Name=mRNA_P-littoralis_Contig15.190.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp
GVKADSDNAKVQVLVRSEKSSLTTLPRGDWEEVEGGGTKGNRIDNGGCGG
DGCGWIQKSKPWRTSGQWVLAVRKTMPPAPDLCEWSKANKRWRSTIPLWS
PYRDDRQWFAAWELGRRLVLTGFLIAVPPDGEGNEHIRAVVAFVLAGVAL
VVGEVARPHRDPWIYWIYRAGGFIILLMTLAGLLQKVGSSRSNAVLV
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