mRNA_P-littoralis_Contig15.137.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5JWX4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX4_9PHAE) HSP 1 Score: 203 bits (516), Expect = 1.290e-58 Identity = 97/204 (47.55%), Postives = 136/204 (66.67%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIFPQIVSGDAIMKLSTNFATKIQIAKSRSSRTIDMDRGVILEKMTLLSPIAFGYS-VRFVIGAGEAGGHSPMWLSPGNRRSELFHLSKRG 621
V V CE CGI+ +ASDNWRETG+ NYNNSY+V +++LY CL+AF GT I FF F+ PL +D W NP+ L + L ++ N FLAFLA++D EFRCW+WG FP I++ DA MK++ NF T Q+ SR + I+ D + L +++++SP FG + V+FV+GAGE G++P W+SP R SE+FH ++RG
Sbjct: 279 VNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSKRLANGTNLLNVLNNIFLAFLALIDHTFEFRCWMWGKFPPILTFDACMKIACNFVTLGQVIASRPEQDINTDLVMNLLQLSMVSPAWFGGTRVQFVVGAGETVGNAPAWVSPDIRLSEIFHKTQRG 482
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5L2N5_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N5_9PHAE) HSP 1 Score: 194 bits (493), Expect = 8.610e-58 Identity = 98/217 (45.16%), Postives = 136/217 (62.67%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIFPQIVSGDAIMKLSTNFATKIQIAKSRSSRTIDMDR------------GVILEKMTLLSPIAFGYS-VRFVIGAGEAGGHSPMWLSPGNRRSELFHLSKRGK 624
V V CE CGI+ +ASDNWRETG+ NYNNSY+V ++ILY CL+AF GT I FF F+ PL +D W NP+ L + L ++ N FLAFLA++D EFRCW+WG FP I++ DA MK++ NF T Q+ SR + I+ D + L +++++SP FG + V+FV+GAGE G++P W+SP R SE FH ++RG+
Sbjct: 112 VNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSKRLANGTNLLNVLNNIFLAFLALIDHTFEFRCWMWGKFPPILTFDACMKIACNFVTLGQVIASRPEQDINTDLXXXXXXXXXXVLAMNLLQLSMVSPAWFGGTRVQFVVGAGETVGNAPAWVSPDIRLSENFHKTQRGR 328
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5JPP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP3_9PHAE) HSP 1 Score: 178 bits (452), Expect = 1.530e-48 Identity = 90/204 (44.12%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIFPQIVSGDAIMKLSTNFATKIQIAKSRSSRTIDMDRGVILEKMTLLSPIAFGYS-VRFVIGAGEAGGHSPMWLSPGNRRSELFHLSKRG 621
V V CE CGI+ A+DNWRETG+ NYNNSY+V ++ILY CL+AF GT I F F+ PL +D W NP+ L + L ++ + FLAFLA++D EFRCW+WG FP +++ DA N T Q+ S + I+ D + L +++++SP FG + V+FV+GAGE G++P W+SP R SE+FH ++RG
Sbjct: 279 VNVHTNECETCGIHGFANDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTICAVFETFLEPLASDLVWIKANPDLSKRLANGTNLLNVLNSIFLAFLALIDHTFEFRCWMWGKFPPMLTFDAC-----NSVTLGQVIASTPEQDINTDLVMNLLQLSIVSPAWFGGTRVQFVVGAGETVGNAPAWVSPDIRLSEIFHKTQRG 477
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5K6Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y4_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.870e-47 Identity = 89/204 (43.63%), Postives = 125/204 (61.27%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIFPQIVSGDAIMKLSTNFATKIQIAKSRSSRTIDMDRGVILEKMTLLSPIAFGYS-VRFVIGAGEAGGHSPMWLSPGNRRSELFHLSKRG 621
V V CE CGI+ +ASDNWRETG+ NYNNSY+V ++ILY CL+AF GT I FF F+ PL +D W NP+ L + L A++ EFRCW+WG FP I++ DA MK++ NF T Q+ SR + I+ + L +++++SP FG + V+FV+GAGE G++P W+SP SE+FH ++RG
Sbjct: 196 VNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSTRLANCTNLLXXXXXXXXX-XALIYHTFEFRCWMWGKFPPILTFDACMKIACNFVTLGQVIASRPEQDINTVLIMNLLQLSMVSPAWFGGTRVQFVVGAGETVGNAPAWVSPDILLSEIFHKTQRG 398
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5KIT6_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIT6_9PHAE) HSP 1 Score: 151 bits (381), Expect = 7.430e-42 Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIFPQIVSGDAIMKLSTNFAT 414
V V CE CGI+ +ASDNWRETG+ NYNNSY+V +++LY CL+AF GT I FF F+ PL +D W NP+ L L ++ N FLAFLA++D EFRCW+WG FP I++ DA MK++ NF T
Sbjct: 13 VNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSKRLANGINLLNVLNNIFLAFLALIDHTFEFRCWMWGKFPPILTFDACMKIACNFVT 146
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5JGH9_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH9_9PHAE) HSP 1 Score: 150 bits (379), Expect = 6.410e-39 Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIFPQIVSGDAIMKLSTNFATKIQIAKSR 438
V V CE CGI+ +AS+NWRETG+ NYNNSY+V ++ILY CL+AF GT I FF F+ PL +D W NP+ + L + L ++ N FLAFLA++D EFRCW+W FP I++ DA MK++ NF T Q K R
Sbjct: 208 VNVHTNECETCGIHGLASENWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSNRLANGTNLLNVLNNIFLAFLALIDHTFEFRCWMWVKFPPILTFDACMKIACNFVTLGQRTKRR 349
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5JGB2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB2_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.610e-27 Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPEAHHSLDKQSRLCDMFKNAFLAFLAVVDFPLEFRCWLWGIF 360
+ V CE I+ +ASDNWRETG+ NYN SY+V + IL CL+AF GT + F F+ PL +D W NP+ L + L ++ N FLAFLA++D EFRCW+WG F
Sbjct: 112 MNVHENECETSAIHGLASDNWRETGLFNYNKSYLVELFILCRCLEAFTRGTTLSAFVETFLEPLASDLVWIKANPDLSKRLANGTNLLNVLNNIFLAFLALIDHAFEFRCWMWGSF 227
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5L0Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y4_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 3.560e-21 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPE 240
V V CE CGI+ +ASDNWRETG+ NYNNSY+V +++LY CL+AF GT I FF F+ PLG+D W NP+
Sbjct: 154 VNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTIGAFFETFLEPLGSDLVWIKANPD 229
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5K0A2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A2_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.480e-18 Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 10 TVTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPE 240
TV+V C+ CG + +ASDNWRETG+ NYNNSY+V + ILY CL+AF GT I FF + PL +D W NP+
Sbjct: 3 TVSVHTNECKTCGNHGLASDNWRETGLFNYNNSYLVELAILYRCLEAFTRGTTISAFFETLLEPLASDLVWIKANPD 79
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Match: A0A6H5JSN4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN4_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 8.210e-18 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 13 VTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAFISGTPIQDFFTMFVAPLGADYSWAYNNPE 240
V V C CGI+ +ASDNWRETG+ NYNNSY+V ++ILY CL+ F GT FF F+ PL +D W+ NP+
Sbjct: 4 VNVNTNGCATCGIHGLASDNWRETGLFNYNNSYLVELSILYRCLETFTRGTTKSAFFETFLEPLASDLVWSKANPD 79 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.137.1 >prot_P-littoralis_Contig15.137.1 ID=prot_P-littoralis_Contig15.137.1|Name=mRNA_P-littoralis_Contig15.137.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp NVVTVTVERRVCEKCGIYAMASDNWRETGVCNYNNSYIVAVTILYNCLDAback to top mRNA from alignment at P-littoralis_Contig15:494144..495093+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.137.1 ID=mRNA_P-littoralis_Contig15.137.1|Name=mRNA_P-littoralis_Contig15.137.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=950bp|location=Sequence derived from alignment at P-littoralis_Contig15:494144..495093+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:494144..495093+ >mRNA_P-littoralis_Contig15.137.1 ID=mRNA_P-littoralis_Contig15.137.1|Name=mRNA_P-littoralis_Contig15.137.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig15:494144..495093+ (Pylaiella littoralis U1_48)back to top |