prot_P-littoralis_Contig15.124.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.124.1
Unique Nameprot_P-littoralis_Contig15.124.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length137
Homology
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.540e-9
Identity = 45/133 (33.83%), Postives = 61/133 (45.86%), Query Frame = 0
Query:    6 GNSGDMTVCCPLGCGKCGGDDCATF-RAPDYGEFSCCPDTIIASGRMCSSPSIGNAPCIINRYPNCPGLHPWIGDGLCDSNPDIKQYDLNNPE-CEYDGGDCCKCGCEENSAATCRHAANRC-LDPESNCYEQ 135
            G  G+  VCCP+GCG+CGGD C+T   A   G  SCC   + + G  C   +   APCII   P+       +  G+ + + D  Q   N  E  ++ G  CC   C +     C  A +   LD ES C  Q
Sbjct:  579 GIDGNGVVCCPIGCGQCGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTN--EAPCIIGSAPDTDD----VDSGISEESADDTQTCSNGIEGIDHKGEVCCPLACGQCGGTGCGSAGSAFELDGESCCSSQ 705          
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 3.860e-6
Identity = 30/64 (46.88%), Postives = 36/64 (56.25%), Query Frame = 0
Query:    6 GNSGDMTVCCPLGCGKCGGDDCATF-RAPDYGEFSCCPDTIIASGRMCSSPSIGNAPCIINRYP 68
            G  G+  VCCPLGCG+CGG  C T   A      SCC  +I ASG+ C   +  +APCII   P
Sbjct:  276 GIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETN--DAPCIIGSSP 337          
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 7.930e-6
Identity = 27/53 (50.94%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   13 VCCPLGCGKCGGDDCATFRAPD-YGEFSCCPDTIIASGRMCSSPSIGNAPCII 64
            VCCPLGCG+CGG  C+T  A +  G  SCC   +  SGR C   +   APCII
Sbjct:  755 VCCPLGCGQCGGSGCSTSGASNGLGAESCCSSEVKDSGRYCDDAN--EAPCII 805          
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Match: A0A2D9P508_9BACT (Dockerin domain-containing protein (Fragment) n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2D9P508_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 1.530e-5
Identity = 22/45 (48.89%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   67 YPNCPGLHPWIGDGLCDSNPDIKQYDLNNPECEYDGGDCCKCGCE 111
            YP+C G   WIGDG CD+         NNP+C++DGGDCC   C+
Sbjct:  683 YPDCLGTVSWIGDGWCDAGN-------NNPDCDFDGGDCCADSCD 720          
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.550e-5
Identity = 40/122 (32.79%), Postives = 52/122 (42.62%), Query Frame = 0
Query:   14 CCPLGCGKCGGDD-CATFRAPDYGEFSCCPDTIIASGRMCSSPSIGNAPCIINRYPNCPGLHPWIGDGLCDSNPDIKQYDLNNPECEYDGGDCCKCGCEENSAATCR------HAANRCLDP 128
            CC +    CGGD  C T+R  D  + +C   T++A                    P+C G    IGD  CDS       + NNPEC YDGGDCC   C  +  + C       ++   CLDP
Sbjct:  121 CCEM---DCGGDYYCDTYRF-DCSDSTCLSQTVVAEN------------------PDCAGDWLTIGDEFCDS-------ENNNPECAYDGGDCCADTCPLSIDSACGFDGFADYSGFDCLDP 213          
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Match: A0A2E1MIS1_9BACT (Dockerin domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E1MIS1_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 5.330e-5
Identity = 22/47 (46.81%), Postives = 27/47 (57.45%), Query Frame = 0
Query:   64 INRYPNCPGLHPWIGDGLCDSNPDIKQYDLNNPECEYDGGDCCKCGC 110
            +N Y +C G+  WI DG CD          NNP+C YDGGDCC+  C
Sbjct: 1064 VNPYLDCQGVISWIADGYCD-------LSNNNPDCGYDGGDCCESTC 1103          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JUS5_9PHAE2.540e-933.83MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JC43_9PHAE3.860e-646.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT7_9PHAE7.930e-650.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D9P508_9BACT1.530e-548.89Dockerin domain-containing protein (Fragment) n=1 ... [more]
D7FTI5_ECTSI1.550e-532.79Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A2E1MIS1_9BACT5.330e-546.81Dockerin domain-containing protein n=1 Tax=Candida... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:427847..435484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.124.1mRNA_P-littoralis_Contig15.124.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 427682..437868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.124.1 ID=prot_P-littoralis_Contig15.124.1|Name=mRNA_P-littoralis_Contig15.124.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=137bp
MPGHGGNSGDMTVCCPLGCGKCGGDDCATFRAPDYGEFSCCPDTIIASGR
MCSSPSIGNAPCIINRYPNCPGLHPWIGDGLCDSNPDIKQYDLNNPECEY
DGGDCCKCGCEENSAATCRHAANRCLDPESNCYEQP*
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