mRNA_P-littoralis_Contig15.98.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.98.1
Unique NamemRNA_P-littoralis_Contig15.98.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI)

HSP 1 Score: 1202 bits (3109), Expect = 0.000e+0
Identity = 608/656 (92.68%), Postives = 628/656 (95.73%), Query Frame = 1
Query:  121 ERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNP-RTPEDRRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDKRRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSEGK 2085
            ERALPIIRKFVDQKRGSE ELLRPEWG AM  LLSEYRGLFEPLRVKRPPPK+P   P+    +     FLYNVKARLNDVL+IEA CRKVDFHL+KRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG +MSKKDASNLVRDVRNTRKDMWKSMREPGTE PPKAFSLMPHFSLTRAFVRYDSQSIG LAKSLDF GVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRP+T+KNQTQRTRKVLRLNNRYRKGIGVC+KDPWFTDE+LYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSP+TFEASEFKGS+SSISSREYKHQSLTRFSA+AEV RRLD+VEYGQAV+AFDSVSLKQPGSSVAYSSVIYCTL VRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTY+Q VRKEQRSSAEPLSPERRKELLKKIRDK+RVVFFGNGQFGHGARG CPRKALIR LGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG+SC V++IDRDTNGSANIGVCGVFQLLGLKRPSFLCR SSEGK
Sbjct:   42 ERALPIIRKFVDQKRGSEKELLRPEWGEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGREDFLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGIKMSKKDASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAKSLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNRYRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPKTFEASEFKGSQSSISSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAFDSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYKQEVRKEQRSSAEPLSPERRKELLKKIRDKKRVVFFGNGQFGHGARGACPRKALIRALGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGQSCSVKFIDRDTNGSANIGVCGVFQLLGLKRPSFLCRKSSEGK 697          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA)

HSP 1 Score: 353 bits (906), Expect = 4.430e-108
Identity = 243/676 (35.95%), Postives = 343/676 (50.74%), Query Frame = 1
Query:  115 DSERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPRTPEDRRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDN--HIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAE---PLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDE----GRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2067
            D   A   +R F+ + RG     L P W   M  L  E R     LR   P P     P         R + +NVK   +  L ++A  R +    + RRGEIW+ INE + S++   KT+     QR  L+E   P W DEG E+  +D +   R + +     R  +W + +EPGT  PP+ ++++P F L  AF+  D+  +  L K L   G       L+T      G+++RLWWT  FD H      +R   K+ +  R   +       R+G+ +  ++ W  D+  Y A +       P +V  I++DG +  V L TL    P   G  ELV++GY +I+    V +  +G+F++  PL       L + D+   +E +G+DPGQ  +   VR  +T     EA++ KGS   IS REY++Q+L   + R E  RR  N  Y  A++++  D  S + P     +S  +Y  L     E LS +RR   FAR RA  R +  +ARDIA G+    A R E+R SA    P+SP RR+ELL K++++          RVVFFGNGQFG GA GP PRKAL+++L  +C VVL DE+ TSK C  CG  L QV GSRVFRCSS  DE    G  C VRY+DRD  G  NI + GV +L G  RP+ L R
Sbjct:   57 DDAAAEAKLRDFLTRPRGRARVPLGPHWAAGMTSLAREEREALSHLRTPLPNPGRAIDPPQ------LREYRFNVKNFPHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDEGPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVLSVLGKKLR-KGAGAADDALRT------GRSDRLWWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVT--RRTEAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSP-RRRELLAKVQERLAGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLAR 713          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 327 bits (837), Expect = 1.880e-97
Identity = 248/697 (35.58%), Postives = 337/697 (48.35%), Query Frame = 1
Query:   97 RGSWAEDSERALPIIRKFVDQKRGSENEL-LRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPR-------TPEDRRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYD------SQSIGNLA--KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANI---TSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2079
            R +  +D   A  ++  F+ + RGS+ +  L  +W  AM   L+  R   +P RV   PP+  R         ED  RVD    F  N+      VL  EA  R  D   +  +  +W+ IN  Q  +    TK    KQ    + I  P W  E      T+  K     L R V + R  + ++ R PGT  PPK F+L+P   L    +  D      S + G  A  ++L   G+   QV             ER WW  + + H +  V      +++   R + + R       GI       W  +  L       P    PW VN+I+TDGLQV V LAT   T  +P GV EL++KGYASI+D  +    ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A +   TSPE F+    K   +  S+ ++K  SL++   + E  RR DN  Y  A+    SVS++ PG + AY+++++    V   E LS ERR + F   RA+ R +  MA  IA  +    A+RK       P  PE R+ LL ++RD          RVVFFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG  L QV+GSRVFRC S   EG +  C VR+IDRD N S NI +CG+  LLG  RP  LCR   E
Sbjct:   97 RAAAVQDDAAAAAMVEAFLVRPRGSDGQQQLHEDWWAAMGSGLTYIRNRLQPFRVA--PPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDRIDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLHDKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIP-GVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFK----KIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCRGVGE 776          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA)

HSP 1 Score: 324 bits (830), Expect = 4.390e-96
Identity = 240/714 (33.61%), Postives = 354/714 (49.58%), Query Frame = 1
Query:   97 RGSWAEDSERALPIIRKFVDQKRGSE-NELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPRTPED-------RRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQ--------SIGNLAKSLDFS----------GVSEN-----QVTLKTTGVKCSGKA-------ERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKG-SRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG--RSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNS 2073
            R    ++ + A+ ++ +F+ + RG E ++ L  +W GAM   L   R    P RV  PP    R   D         ++D    F  N+    + VL+ EA  R  D   +  +  +W+ IN  Q  +    TKE   KQ    ++I  P W  +G    +   K +   LVR +  TR+ M  S R PGT  PPK F+L+P   L    +  DS+        ++ N+  SLD            G S+      Q  L++  V+   KA       +  WW  +F+ H E++  R P   +   +  + + R       GI       W  ++ L       P    PW VN+I+TDGLQV V LAT    +P+  GV +LVKKGY SI++    +  ++G+F  A  + G   S ++  D    +E+VG+DPGQ  +Y    A +TS  +  A +FK    +S S+ +++  SL++     +  RR DN+ Y  A+     VS++ PG + AY++ ++        E LS  RR + F   RA+ R +  MAR+I   ++   A+RK    S E      R  LL ++RD+         RV FFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTS  CC CG+ L QVD SRV++C+S   E   ++C VR+IDRD N S NIG+CG+  LLG+ RP  LCR +
Sbjct:  113 RAGAVQEDDTAINMVEEFIVRPRGREGDQRLHEDWRGAMETALKYVRDRLSPFRVI-PPGGFGRVQVDDXXXXXXXEQLDEMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRDIEPPAWIQDGDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLH-EKVRLRMPRRAEVNWKPAKPLGRKGKTAWGGIRCLWGTGWTIEDDLSKHGNKKP----PWFVNNITTDGLQVNVTLATKV-VDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSS--AEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAELSGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKVGPESEE------RAALLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCRTA 811          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.410e-93
Identity = 239/690 (34.64%), Postives = 336/690 (48.70%), Query Frame = 1
Query:   97 RGSWAEDSERALPIIRKFVDQKRGSENEL-LRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPR-------TPEDRRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAK----SLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVC--SKDPWFTDELL-YSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2067
            R    +D   A  +I  F+++ RG++ +  L  +W  AM   L+  R   +P RV   PP   R         ED  RVD    F  N+      VLQ+EA  R+ +   +  +  +W+ IN  Q  +    TK    KQ    + I  P W  E      T+  K     L R + + R  + ++ R PGT  PPK F+L+P   L    +  D + I ++ +     +   G+S  Q+             ER WW  +F+ H + +  R P + +   +   K L    +   G   C   ++  FT++L  Y  K        PW VN+I+TDGLQV V LAT      +P GV EL++KGY SI+D       ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A I+S  +  A +FK  + +  S+ ++K  SL +     E  RR DN  Y  A+     VS++ PG + AY+  ++        E LS +RR + F   RA+ R +  MA  IA  +    A+RK       P  P+ R+ LL  +RD          RVVFFGN  FGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG  L QV+GSRVFRC S   EG +  C VR+IDRD N S NI +CG+  LLG+ RP  LCR
Sbjct:   96 RAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVA--PPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGK-VRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP------PWFVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTS--AEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRK-----IGP-EPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 767          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A6H5KAA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA5_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 9.730e-83
Identity = 145/188 (77.13%), Postives = 149/188 (79.26%), Query Frame = 1
Query:  121 ERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNP-RTPEDRRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 681
            ERALPIIRKFVDQKRGSENELLRPEWG AM DLLSEYRGLFEPLR KRPPPKNP   P+    +     FLYNVKA LNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS      F++                G EMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT
Sbjct:   59 ERALPIIRKFVDQKRGSENELLRPEWGEAMEDLLSEYRGLFEPLRAKRPPPKNPPEHPKTEEELTGREDFLYNVKAMLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS------FIQDER------------GGIEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 228          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.090e-70
Identity = 211/680 (31.03%), Postives = 308/680 (45.29%), Query Frame = 1
Query:  115 DSERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPRTPEDRRRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSE------------------RIVNRRPNTKKNQTQRTRKVLRLNNRYRK-GIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSA---EPLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLG 2040
            D   A   +R F+ + RG     L P W   M  L  E R     LR   P       P   R   + R + +N+K   +  L + A  R +    + RRGEIW+ INE + S++   KT+     QR  L+    P W DEG E+  +D     R + +     R  +W + +EPGT  PP+ ++++P F L  AFV  D++ +  L   L        +      G   + +++RLWWT  FD H                        +R   K+ +  R R V++   + R+ G+ +  ++ W  D+  Y A +       P +V  I++DG +  V L TL    P   G  ELV++GY +I+    V +  +G+F++  PL          P+  ++   LD G  + +          E   A++ KGS   IS REY++QSL   + R E  RR  N  Y  A++ +  D  S + PG    +S  +Y  L     E LS +RR   FAR RA  R +  +ARDIA G+    A R E+R SA    P+SP RR+ELL  +R++          R+VFFGNGQFG GA G  PRKAL++ L  +C VVL DE+ TSK     G                    G  C VRY+DRD  G  NI    V + +G
Sbjct:  230 DDAAAEAKLRDFLTRPRGRARLPLGPHWAAGMASLAREEREARSHLRTPLP------NPGRERDAPQLREYRFNIKNFPHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDEGPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVLSVLGTKL-------RKAAGAADGALRTRRSDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRAR-RAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAPELVREGYDAIRGTCVVGRDRRGLFRDVAPL----------PEELLDC--LDAGDRACFV---------EAIGAADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSP-RRRELLANVRERLAGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTSKTYEDSGA-------------------GGRCSVRYLDRDCAGGGNIANDRVDEEVG 851          
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.940e-54
Identity = 166/465 (35.70%), Postives = 219/465 (47.10%), Query Frame = 1
Query:  727 KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGM-ARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2079
            ++L   GV   QV             ER WW  + + H +  V      +++   R + + R       GI       W  +  L       P    PW+VN+I+TDGLQV V LAT      +P GV EL++KGY SI D  +    ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A I+S  + E   FK  + +  S+ ++K  SL++                  A + F+  +                         L EE   QKF       R  +G  A DI  G T   A+RK       P  PE R+ LL ++RD          RVVFFGN QFGHG+RGP PRKALIR + +L PVVL++EFRTSK CC CG  L QV+GSRVFRC S   EG +  C VR+IDRD N S NI +CG+  LLG  RP  LCR + E
Sbjct:   45 RALQQEGVRSRQVRKDWKTRLTGDMTERGWWLCMLNLHDKVRVRVPRGAERSGEARMKPLGRKGKLAWGGIRSLWGQRWTIEGDLREYGHKAP----PWLVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSINDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSSE--NFKKIQPAFRSASDHKFLSLSK------------------AWRKFEGEAF------------------------LGEE--TQKF-------RCQEGEDAGDIEDGGTAA-ALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMNEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPQHLCRGAGE 444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.98.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LP59_ECTSI0.000e+092.68N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A836CCX3_9STRA4.430e-10835.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYB9_9STRA1.880e-9735.58Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z394_9STRA4.390e-9633.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYX5_9STRA1.410e-9334.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KAA5_9PHAE9.730e-8377.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZC24_9STRA1.090e-7031.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC03_9STRA2.940e-5435.70OrfB_Zn_ribbon domain-containing protein n=1 Tax=T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:284340..286427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog3075.A0A087SAP3
PFAMsAIRS_C,GATase_5
Model size2090
Max annot lvl3041|Chlorophyta
KEGG rclassRC00010,RC01160
KEGG koko:K01952
KEGG ReactionR04463
KEGG Pathwayko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
Exons1
Evalue0.00035
EggNOG OGsCOG0046@1|root,KOG1907@2759|Eukaryota,37IK9@33090|Viridiplantae,34GNK@3041|Chlorophyta
EC6.3.5.3
DescriptionCobB/CobQ-like glutamine amidotransferase domain
Cds size2088
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789712.3975434-CDS-P-littoralis_Contig15:284339..2864271680789712.3975434-CDS-P-littoralis_Contig15:284339..286427Pylaiella littoralis U1_48CDSP-littoralis_Contig15 284340..286427 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.98.1prot_P-littoralis_Contig15.98.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 284340..286427 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.98.1

>prot_P-littoralis_Contig15.98.1 ID=prot_P-littoralis_Contig15.98.1|Name=mRNA_P-littoralis_Contig15.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=696bp
GSPFVSPREKTVGVPGRRTLLDQYSPCSKEDLRGSWAEDSERALPIIRKF
VDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPRTPEDR
RRVDRARRFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQ
SIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRK
DMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGV
SENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTR
KVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDG
LQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFP
LYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGS
RSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSS
VAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNT
YRQAVRKEQRSSAEPLSPERRKELLKKIRDKRRVVFFGNGQFGHGARGPC
PRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMD
EGRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSEGK*
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mRNA from alignment at P-littoralis_Contig15:284340..286427+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.98.1 ID=mRNA_P-littoralis_Contig15.98.1|Name=mRNA_P-littoralis_Contig15.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2088bp|location=Sequence derived from alignment at P-littoralis_Contig15:284340..286427+ (Pylaiella littoralis U1_48)
GGATCACCTTTCGTGTCGCCTCGAGAGAAGACTGTGGGAGTTCCGGGACG ACGAACACTTTTGGACCAATATTCCCCGTGCAGCAAAGAAGATTTACGAG GCAGCTGGGCAGAAGACTCTGAACGAGCTTTGCCAATTATACGGAAGTTC GTGGACCAGAAAAGAGGAAGTGAAAACGAGCTGCTTCGTCCTGAGTGGGG AGGAGCCATGAGGGACCTCCTGTCGGAGTACAGGGGCCTCTTTGAACCTT TGCGTGTGAAGAGACCTCCACCCAAGAACCCCCGAACACCCGAAGACAGA AGAAGAGTTGACCGGGCGCGAAGATTTCTGTACAACGTGAAAGCCAGGCT GAACGATGTCTTACAGATCGAGGCCGAGTGTCGTAAGGTAGATTTTCACC TTCAAAAGAGGAGAGGGGAGATCTGGTCCGAAATCAACGAGAGGCAGCAG TCCATCAAGTCATCCAAGACGAAAGAGGGGTTCTTGAAACAGCGACATCT TCTGCAAGAAATACCTGTACCTCCATGGTTTGACGAGGGGACCGAGATGA GCAAGAAGGACGCGTCGAATCTCGTGCGCGACGTTCGAAACACGAGGAAG GACATGTGGAAGAGCATGAGGGAGCCGGGAACAGAGCATCCACCGAAAGC CTTCTCACTGATGCCACACTTCTCTCTCACAAGGGCGTTCGTGAGGTACG ACAGCCAGAGCATCGGCAACCTCGCCAAATCTCTTGATTTCTCCGGTGTT TCGGAAAACCAGGTCACTTTGAAGACCACTGGTGTGAAGTGTTCTGGGAA AGCTGAAAGACTCTGGTGGACGGGCATCTTTGACTTTCATTCGGAGAGGA TCGTGAACAGACGCCCGAACACCAAGAAGAATCAGACACAGCGGACGCGG AAAGTCCTTCGCCTGAACAACCGCTACCGAAAGGGAATCGGTGTATGCAG TAAGGACCCGTGGTTCACCGACGAACTCCTTTACTCAGCGAAGAGAGATG ACCCGAGCTGTGAAACACCCTGGATCGTCAATTCGATATCTACGGACGGC CTACAGGTCAAGGTTTGCCTGGCTACTCTTGCAAAAACCAATCCGCTGCC GAAGGGTGTGAAGGAGCTCGTGAAGAAGGGCTACGCATCTATTCAGGACA AGCTTCGAGTATCCAAAAGCTCCAAAGGCGTTTTCAAGGAGGCCTTCCCT CTCTACGGTACAGAGAAGTCCCGTCTTTCTTCCCCCGACAATCACATTGA GGTTGTAGGTCTTGACCCCGGGCAAGTCTCCGTCTACGCGACGGTGAGAG CGAACATCACGTCCCCGGAGACATTCGAAGCTTCTGAGTTCAAGGGATCA CGGTCGTCCATTTCTTCTCGAGAATACAAGCACCAGTCGCTTACCCGCTT CAGCGCCAGGGCAGAAGTCAGAAGGAGACTTGATAACGTGGAATATGGTC AAGCGGTTAAAGCCTTCGACTCCGTGTCGCTAAAACAGCCTGGTTCATCT GTGGCGTACTCTTCCGTAATCTACTGCACGCTAGGTGTTAGAGTAGTGGA ACTGCTTTCAGAAGAGCGTAGACTTCAGAAGTTTGCTAGACTTCGTGCGA GACAACGCACCGTTGACGGTATGGCTAGGGACATTGCTTTCGGAAACACG TACAGGCAAGCGGTCAGGAAGGAGCAACGGTCTTCGGCCGAACCGTTGTC ACCAGAGAGGAGAAAGGAGTTGTTGAAGAAGATTCGAGATAAGAGGAGGG TTGTTTTCTTCGGCAACGGTCAGTTTGGCCATGGTGCGAGAGGACCTTGT CCTAGGAAAGCGCTGATTCGAGAGCTGGGTGTCCTTTGTCCGGTGGTATT GGTGGACGAGTTTCGAACGTCAAAATGCTGCTGTAGTTGCGGCGTTCCAC TCAAGCAAGTGGATGGTTCTCGGGTATTTCGCTGTTCAAGCCAGATGGAC GAGGGCCGATCTTGCCCCGTGAGGTATATCGACAGAGATACAAATGGTTC GGCCAACATAGGAGTTTGTGGCGTGTTTCAGCTCCTGGGATTGAAGAGAC CATCGTTCCTTTGTCGTAACTCTAGCGAGGGCAAGTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:284340..286427+

>mRNA_P-littoralis_Contig15.98.1 ID=mRNA_P-littoralis_Contig15.98.1|Name=mRNA_P-littoralis_Contig15.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2088bp|location=Sequence derived from alignment at P-littoralis_Contig15:284340..286427+ (Pylaiella littoralis U1_48)
GGATCACCTTTCGTGTCGCCTCGAGAGAAGACTGTGGGAGTTCCGGGACG
ACGAACACTTTTGGACCAATATTCCCCGTGCAGCAAAGAAGATTTACGAG
GCAGCTGGGCAGAAGACTCTGAACGAGCTTTGCCAATTATACGGAAGTTC
GTGGACCAGAAAAGAGGAAGTGAAAACGAGCTGCTTCGTCCTGAGTGGGG
AGGAGCCATGAGGGACCTCCTGTCGGAGTACAGGGGCCTCTTTGAACCTT
TGCGTGTGAAGAGACCTCCACCCAAGAACCCCCGAACACCCGAAGACAGA
AGAAGAGTTGACCGGGCGCGAAGATTTCTGTACAACGTGAAAGCCAGGCT
GAACGATGTCTTACAGATCGAGGCCGAGTGTCGTAAGGTAGATTTTCACC
TTCAAAAGAGGAGAGGGGAGATCTGGTCCGAAATCAACGAGAGGCAGCAG
TCCATCAAGTCATCCAAGACGAAAGAGGGGTTCTTGAAACAGCGACATCT
TCTGCAAGAAATACCTGTACCTCCATGGTTTGACGAGGGGACCGAGATGA
GCAAGAAGGACGCGTCGAATCTCGTGCGCGACGTTCGAAACACGAGGAAG
GACATGTGGAAGAGCATGAGGGAGCCGGGAACAGAGCATCCACCGAAAGC
CTTCTCACTGATGCCACACTTCTCTCTCACAAGGGCGTTCGTGAGGTACG
ACAGCCAGAGCATCGGCAACCTCGCCAAATCTCTTGATTTCTCCGGTGTT
TCGGAAAACCAGGTCACTTTGAAGACCACTGGTGTGAAGTGTTCTGGGAA
AGCTGAAAGACTCTGGTGGACGGGCATCTTTGACTTTCATTCGGAGAGGA
TCGTGAACAGACGCCCGAACACCAAGAAGAATCAGACACAGCGGACGCGG
AAAGTCCTTCGCCTGAACAACCGCTACCGAAAGGGAATCGGTGTATGCAG
TAAGGACCCGTGGTTCACCGACGAACTCCTTTACTCAGCGAAGAGAGATG
ACCCGAGCTGTGAAACACCCTGGATCGTCAATTCGATATCTACGGACGGC
CTACAGGTCAAGGTTTGCCTGGCTACTCTTGCAAAAACCAATCCGCTGCC
GAAGGGTGTGAAGGAGCTCGTGAAGAAGGGCTACGCATCTATTCAGGACA
AGCTTCGAGTATCCAAAAGCTCCAAAGGCGTTTTCAAGGAGGCCTTCCCT
CTCTACGGTACAGAGAAGTCCCGTCTTTCTTCCCCCGACAATCACATTGA
GGTTGTAGGTCTTGACCCCGGGCAAGTCTCCGTCTACGCGACGGTGAGAG
CGAACATCACGTCCCCGGAGACATTCGAAGCTTCTGAGTTCAAGGGATCA
CGGTCGTCCATTTCTTCTCGAGAATACAAGCACCAGTCGCTTACCCGCTT
CAGCGCCAGGGCAGAAGTCAGAAGGAGACTTGATAACGTGGAATATGGTC
AAGCGGTTAAAGCCTTCGACTCCGTGTCGCTAAAACAGCCTGGTTCATCT
GTGGCGTACTCTTCCGTAATCTACTGCACGCTAGGTGTTAGAGTAGTGGA
ACTGCTTTCAGAAGAGCGTAGACTTCAGAAGTTTGCTAGACTTCGTGCGA
GACAACGCACCGTTGACGGTATGGCTAGGGACATTGCTTTCGGAAACACG
TACAGGCAAGCGGTCAGGAAGGAGCAACGGTCTTCGGCCGAACCGTTGTC
ACCAGAGAGGAGAAAGGAGTTGTTGAAGAAGATTCGAGATAAGAGGAGGG
TTGTTTTCTTCGGCAACGGTCAGTTTGGCCATGGTGCGAGAGGACCTTGT
CCTAGGAAAGCGCTGATTCGAGAGCTGGGTGTCCTTTGTCCGGTGGTATT
GGTGGACGAGTTTCGAACGTCAAAATGCTGCTGTAGTTGCGGCGTTCCAC
TCAAGCAAGTGGATGGTTCTCGGGTATTTCGCTGTTCAAGCCAGATGGAC
GAGGGCCGATCTTGCCCCGTGAGGTATATCGACAGAGATACAAATGGTTC
GGCCAACATAGGAGTTTGTGGCGTGTTTCAGCTCCTGGGATTGAAGAGAC
CATCGTTCCTTTGTCGTAACTCTAGCGAGGGCAAGTAG
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