mRNA_P-littoralis_Contig15.97.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.97.1
Unique NamemRNA_P-littoralis_Contig15.97.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 656 bits (1692), Expect = 1.020e-236
Identity = 324/329 (98.48%), Postives = 327/329 (99.39%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNP 987
            MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGY+TRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLR VRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGT+PFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEES KRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKS+KEPSYIYTLDTYVTHILNNVKRVSNP
Sbjct:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVKRVSNP 329          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 624 bits (1608), Expect = 5.330e-224
Identity = 307/329 (93.31%), Postives = 316/329 (96.05%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNP 987
            MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKI+AFKGT+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWRVEESFKRLKSNL+LEKAHA+TP LYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VT+IL NVKRVS P
Sbjct:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSGP 329          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 565 bits (1456), Expect = 1.610e-200
Identity = 276/329 (83.89%), Postives = 301/329 (91.49%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNP 987
            M  PMSPEIYDAFKKCD QWMQRRRK+DTSSLFYTLT+CC+Q RGV H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI AGY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR V+KGDTL+FDRGYYSK+LL SVH SHAFGVWRLKI+AF+GT+ FFNSC TEATCLILGV+ARLLKYFI GKTYVCLT D SLSR  IK MYASRWRVEESFKRLKSNL+LEKAHA+TP LYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VT+IL NVKRVS+P
Sbjct:    1 MACPMSPEIYDAFKKCDQQWMQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSSP 329          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 559 bits (1440), Expect = 1.190e-192
Identity = 270/318 (84.91%), Postives = 297/318 (93.40%), Query Frame = 1
Query:   34 AFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNP 987
            +++KCD QW+QRRRK+DTSSLF+TLT+CC+Q RGV+H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI +GY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR VRKGDTL+FDRGYYSK+LLRSVHDSHAFGVWRLKI+AFKGT+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VTHIL NVKRVS+P
Sbjct:   27 SYQKCDQQWIQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVSSP 344          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 531 bits (1367), Expect = 5.230e-181
Identity = 263/327 (80.43%), Postives = 287/327 (87.77%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVS 981
            MT+P+SPEIYDAFKKCD QWMQRRRKLDTSS+FYT+TKCC +ERGV+H+L+ME E+YSSQA+H ARKKLP GAFKEVNRFL RGPHEPR+FA+DGSKVHVHPSFI AGY TRTN+KPVPRPAKRPLVMLSSMVDV+TK+C+DFELTKHF+ER+AA  MLR VRK DTL+FDRGYYSK+LLRSVHDS AFGVWRL+I                  CLILGVR RLLKYFI GKTYVCLTND SLSRRDIK MYA RWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VTHIL NVKRVS
Sbjct:    1 MTRPISPEIYDAFKKCDAQWMQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRI----------------MPCLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVS 311          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 2.620e-122
Identity = 191/250 (76.40%), Postives = 207/250 (82.80%), Query Frame = 1
Query:  154 MENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQK 903
            M NEQYSSQAIH ARKKLP GAFKEVNRFL +GPHEPRVFAVDGSKVHVHPSFIGAGY TRTN+KPVPRPAK PLVMLSSMVDVKTKACVDFELTKHFNE  +                 R Y  K  LRS+HDS AFGVWRLKINAFKGTK F +S  TE TCLILGV++RL+KY I+GKTYVCLTND +LSRRDIK +YASRWR E+S  RLKSN++LEKAHA+TP LYIQEVEARVLLDTITLRLQ+
Sbjct:    1 MGNEQYSSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPVPRPAKSPLVMLSSMVDVKTKACVDFELTKHFNEDGS-----------------RIYTQK--LRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQR 230          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 7.040e-44
Identity = 96/172 (55.81%), Postives = 105/172 (61.05%), Query Frame = 1
Query:   52 GQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAF 567
            G  +QRRRK+DTSSLFYTLTK CIQERGV HILR ++EQYSSQA+HSARKKLP GAFKE                                        PVPRPA RPLVMLSSMVD           TK FNERKA   MLR V +GDTLVFD+ YYS+ LLR+VHDS AF
Sbjct:  172 GDEIQRRRKIDTSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE----------------------------------------PVPRPATRPLVMLSSMVD-----------TKLFNERKADVSMLRSVHQGDTLVFDKEYYSRGLLRNVHDSKAF 292          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A2Z2NHE4_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NHE4_9GAMM)

HSP 1 Score: 108 bits (271), Expect = 3.090e-22
Identity = 95/326 (29.14%), Postives = 149/326 (45.71%), Query Frame = 1
Query:   49 DGQWMQRRRKLD--------------TSSLFYTLTKCCIQERGVAHILRMENEQ---YSSQAIHSARKKLPPGAFKEVN-RFLQRGPHEP-------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLIL-------------------GVRARLLKYFISGKTYVC---LTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTI 885
            D QW +R+R L+              T+   Y +T   + E+     L ++  Q    ++ A  +AR KL    FK +  + LQ+   +P       R+ AVDGSK+++    I AGY T ++N      A  P   +S + ++KTK  +DF+L  H +ERK A   L  + + D +V+DRGYYS ++L      H   ++RLK  A +  + F NS   +A   I                     +  RL+KY   G +Y+    L +    S   +  +Y SRW VEE +K  K  +K+E  HA++     QE+ A   L T+
Sbjct:  342 DRQWQKRQRVLNSLLIMLFIFRLVFSTNKQGYAITTAELWEQ--CRTLGIDLPQPTPVAASAFCNARAKLDEEVFKLLQVQILQQAKPDPKKLWQGHRLMAVDGSKLNLPRQLIRAGYKTPSDN------AHYPQGTVSCLYELKTKIPIDFDLASHRDERKMAISHLNSLSETDVVVYDRGYYSYDMLHEHDKRHIHPIFRLKTTACRVVEAFANSDDIDAVVQIFPSQSKRTSIPAHDPQPDYPALALRLVKYDAGGTSYILGTTLWDQKKYSIEQLSAVYHSRWGVEELYKISKQLMKVEDFHAQSERGVKQELFAHFNLITL 659          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A6L8GJ11_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GJ11_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 1.400e-16
Identity = 87/324 (26.85%), Postives = 144/324 (44.44%), Query Frame = 1
Query:   49 DGQWMQRRRKLDTSSLFYTLTKCCI--QERGVAHILRM-------------ENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEP------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRP-AKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILG-------------------VRARLLKYFISGKTYVCLTNDLS---LSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTIT 888
            D +WM+RRR L++  +   + +  +  +E+G A +                + E   + +I  AR+++    F +++R + R   +       RVFAVDG+K+++    + AGY       P+P+  A  P  ++S +  + TK  VDF L+    ER AA   L  +  GD +VFDRGY+S  LL +V  + A  V+RL+ N     + F     TEA                         V  RL++    G  +   T  L    +S  D+  +Y  RW +EE +K  K  + +++ H +T     QE+ A   L  +T
Sbjct:  342 DRRWMKRRRVLNSLIVMLFVFRLVLSRREKGYATVTAELWEQCRKLGIALPQREPVVASSICKARQRVHEELFLDLHREILRHGGDGARWKGRRVFAVDGTKMNLPRGLVDAGY-------PLPKDGAHYPQGLVSCLYRLDTKVPVDFSLSARACERTAALGHLHALEAGDVVVFDRGYFSFELLHAVIRTGAHPVFRLQANGVAAFRDFMAGDGTEAVVAASPGPDTRRELARRRPGERFDPVDVRLVRCRTGGDGFNLATTLLDADDVSADDLGALYQGRWSIEELYKVSKQTVAVDEFHGRTERGVRQELYAHFNLIAMT 658          
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Match: A0A6L8GGC8_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GGC8_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 3.340e-16
Identity = 78/264 (29.55%), Postives = 125/264 (47.35%), Query Frame = 1
Query:  181 AIHSARKKLPPGAFKEVNR-FLQRGPHEP-----RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILG---VRARL---------------LKYFISGKTYVCLTNDLS----LSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTIT 888
            A+  AR K+ P  F+E++R  L + P  P     RVF VDG+K+++    + AGY T  ++      A  P  ++S + +++ +   DF L    +ER+AA E L+ +  GD +V+DRGY+S  +L +        V+RLK +A   T  F      + T  I      RARL               L  + +G T   L   L+        D+  +Y +RWR+EE +K  K  L +E   A++    +QE+ A  ++ T T
Sbjct:  379 AMSRARAKVDPEVFRELHREILAQAPDRPLWKGRRVFGVDGAKINLPRPLVEAGYATPGDH------AHYPQGLVSCLYELEPRLPFDFGLHADTSERRAAAEHLKALSAGDVVVYDRGYFSYEMLLAHVVRGQDAVFRLKRDANAETVAFLAGPLDDRTVEIRPDDKARARLKARHPGAAFGPLKLRLVRYAAGDTVFALGTTLAEDDGFGLEDLAAIYRARWRIEEHYKIAKWFLAVESFRAESERGVLQELYANFVMVTAT 636          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LP60_ECTSI1.020e-23698.48EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
D8LP47_ECTSI5.330e-22493.31EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNB6_ESV1K1.610e-20083.89EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5K772_9PHAE1.190e-19284.91DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE5.230e-18180.43DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE2.620e-12276.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T1_9PHAE7.040e-4455.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2Z2NHE4_9GAMM3.090e-2229.14Uncharacterized protein n=1 Tax=Granulosicoccus an... [more]
A0A6L8GJ11_9BACT1.400e-1626.85IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]
A0A6L8GGC8_9BACT3.340e-1629.55IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:282484..283586 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1046724.KB889834_gene1048
PFAMsDDE_Tnp_1,Nterm_IS4
Model size1103
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.72e-23
EggNOG OGsCOG3385@1|root,COG3385@2|Bacteria,1MVRM@1224|Proteobacteria,1RRFT@1236|Gammaproteobacteria,464GA@72275|Alteromonadaceae
DescriptionCOG3385 FOG Transposase and inactivated derivatives
Cds size990
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789712.3514366-CDS-P-littoralis_Contig15:282483..2834731680789712.3514366-CDS-P-littoralis_Contig15:282483..283473Pylaiella littoralis U1_48CDSP-littoralis_Contig15 282484..283473 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789712.3608398-UTR-P-littoralis_Contig15:283473..2835861680789712.3608398-UTR-P-littoralis_Contig15:283473..283586Pylaiella littoralis U1_48UTRP-littoralis_Contig15 283474..283586 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.97.1prot_P-littoralis_Contig15.97.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 282484..283473 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.97.1

>prot_P-littoralis_Contig15.97.1 ID=prot_P-littoralis_Contig15.97.1|Name=mRNA_P-littoralis_Contig15.97.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=330bp
MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHIL
RMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHV
HPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFN
ERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFK
GTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKV
MYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQ
KSMKEPSYIYTLDTYVTHILNNVKRVSNP*
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mRNA from alignment at P-littoralis_Contig15:282484..283586+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.97.1 ID=mRNA_P-littoralis_Contig15.97.1|Name=mRNA_P-littoralis_Contig15.97.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1103bp|location=Sequence derived from alignment at P-littoralis_Contig15:282484..283586+ (Pylaiella littoralis U1_48)
ATGACTAAACCGATGTCTCCTGAAATATACGATGCTTTTAAAAAGTGCGA CGGACAGTGGATGCAGAGACGACGAAAGCTAGATACATCTTCCCTTTTCT ACACGCTCACTAAGTGTTGTATTCAAGAGAGAGGTGTCGCTCACATACTG AGGATGGAAAACGAACAGTACTCGTCTCAGGCGATACATTCGGCCAGGAA GAAGCTTCCACCAGGGGCTTTCAAGGAAGTAAACCGGTTCTTGCAACGAG GACCACATGAACCACGTGTGTTCGCCGTAGATGGTTCGAAAGTGCACGTG CACCCTTCGTTCATCGGGGCTGGATATATGACCCGGACGAACAATAAACC GGTCCCGCGTCCCGCGAAAAGACCTCTTGTCATGCTTTCTTCGATGGTGG ACGTAAAAACAAAAGCGTGTGTGGACTTTGAGCTCACGAAACACTTCAAC GAAAGAAAGGCAGCCACTGAGATGCTCCGAGGTGTACGGAAAGGGGATAC TCTGGTGTTTGACAGAGGCTACTACTCCAAGAACTTGCTGCGAAGCGTTC ATGACTCGCATGCGTTTGGGGTTTGGCGACTCAAGATAAATGCGTTCAAA GGCACTAAGCCTTTCTTCAACTCGTGTCACACGGAAGCAACATGCCTTAT TCTTGGTGTCAGGGCGCGTCTCTTGAAGTATTTTATTTCTGGTAAAACAT ATGTTTGCCTGACGAACGATCTATCGCTATCTCGGAGGGATATCAAGGTC ATGTACGCGTCGAGGTGGCGGGTGGAGGAATCCTTCAAACGATTGAAATC AAACCTCAAACTTGAGAAAGCACATGCCAAAACTCCGGCTCTTTATATTC AGGAGGTAGAAGCGCGGGTCTTGTTAGACACAATCACACTGAGGTTGCAA AAATCGATGAAGGAACCATCGTATATCTACACACTTGATACATACGTCAC ACATATCCTTAACAACGTCAAGAGAGTTTCGAATCCGTGAAATTGAGCGC ACATTCTGAAGCAGATGTGTTCTCCAAGAAGCGAAGTCGCTTGTGCCATG GTCGCATATATGATCATCATCGCCACGGACCGATTTTTTCAGACAAACTG ACT
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:282484..283586+

>mRNA_P-littoralis_Contig15.97.1 ID=mRNA_P-littoralis_Contig15.97.1|Name=mRNA_P-littoralis_Contig15.97.1|organism=Pylaiella littoralis U1_48|type=CDS|length=990bp|location=Sequence derived from alignment at P-littoralis_Contig15:282484..283586+ (Pylaiella littoralis U1_48)
ATGACTAAACCGATGTCTCCTGAAATATACGATGCTTTTAAAAAGTGCGA
CGGACAGTGGATGCAGAGACGACGAAAGCTAGATACATCTTCCCTTTTCT
ACACGCTCACTAAGTGTTGTATTCAAGAGAGAGGTGTCGCTCACATACTG
AGGATGGAAAACGAACAGTACTCGTCTCAGGCGATACATTCGGCCAGGAA
GAAGCTTCCACCAGGGGCTTTCAAGGAAGTAAACCGGTTCTTGCAACGAG
GACCACATGAACCACGTGTGTTCGCCGTAGATGGTTCGAAAGTGCACGTG
CACCCTTCGTTCATCGGGGCTGGATATATGACCCGGACGAACAATAAACC
GGTCCCGCGTCCCGCGAAAAGACCTCTTGTCATGCTTTCTTCGATGGTGG
ACGTAAAAACAAAAGCGTGTGTGGACTTTGAGCTCACGAAACACTTCAAC
GAAAGAAAGGCAGCCACTGAGATGCTCCGAGGTGTACGGAAAGGGGATAC
TCTGGTGTTTGACAGAGGCTACTACTCCAAGAACTTGCTGCGAAGCGTTC
ATGACTCGCATGCGTTTGGGGTTTGGCGACTCAAGATAAATGCGTTCAAA
GGCACTAAGCCTTTCTTCAACTCGTGTCACACGGAAGCAACATGCCTTAT
TCTTGGTGTCAGGGCGCGTCTCTTGAAGTATTTTATTTCTGGTAAAACAT
ATGTTTGCCTGACGAACGATCTATCGCTATCTCGGAGGGATATCAAGGTC
ATGTACGCGTCGAGGTGGCGGGTGGAGGAATCCTTCAAACGATTGAAATC
AAACCTCAAACTTGAGAAAGCACATGCCAAAACTCCGGCTCTTTATATTC
AGGAGGTAGAAGCGCGGGTCTTGTTAGACACAATCACACTGAGGTTGCAA
AAATCGATGAAGGAACCATCGTATATCTACACACTTGATACATACGTCAC
ACATATCCTTAACAACGTCAAGAGAGTTTCGAATCCGTGA
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