mRNA_P-littoralis_Contig15.92.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.92.1
Unique NamemRNA_P-littoralis_Contig15.92.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 526 bits (1354), Expect = 2.990e-185
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR 771
            MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGY+TRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLR VRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGT+PFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR
Sbjct:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR 257          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 513 bits (1320), Expect = 3.720e-180
Identity = 247/257 (96.11%), Postives = 250/257 (97.28%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR 771
            MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKI+AFKGT+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWR
Sbjct:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWR 257          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 454 bits (1167), Expect = 1.420e-156
Identity = 216/257 (84.05%), Postives = 234/257 (91.05%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR 771
            M  PMSPEIYDAFKKCD QWMQRRRK+DTSSLFYTLT+CC+Q RGV H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI AGY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR V+KGDTL+FDRGYYSK+LL SVH SHAFGVWRLKI+AF+GT+ FFNSC TEATCLILGV+ARLLKYFI GKTYVCLT D SLSR  IK MYASRWR
Sbjct:    1 MACPMSPEIYDAFKKCDQQWMQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWR 257          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 4.700e-146
Identity = 206/246 (83.74%), Postives = 229/246 (93.09%), Query Frame = 1
Query:   34 AFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR 771
            +++KCD QW+QRRRK+DTSSLF+TLT+CC+Q RGV+H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI +GY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR VRKGDTL+FDRGYYSK+LLRSVHDSHAFGVWRLKI+AFKGT+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWR
Sbjct:   27 SYQKCDQQWIQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWR 272          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 1.670e-136
Identity = 207/285 (72.63%), Postives = 231/285 (81.05%), Query Frame = 1
Query:    1 MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRWRNPSND*NQTSNLR---KHMPKLRLFI 846
            MT+P+SPEIYDAFKKCD QWMQRRRKLDTSS+FYT+TKCC +ERGV+H+L+ME E+YSSQA+H ARKKLP GAFKEVNRFL RGPHEPR+FA+DGSKVHVHPSFI AGY TRTN+KPVPRPAKRPLVMLSSMVDV+TK+C+DFELTKHF+ER+AA  MLR VRK DTL+FDRGYYSK+LLRSVHDS AFGVWRL+I                  CLILGVR RLLKYFI GKTYVCLTND SLSRRDIK MYA  WRWR   +     SNL+    H     L+I
Sbjct:    1 MTRPISPEIYDAFKKCDAQWMQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRI----------------MPCLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYA--WRWRVEESFKRLKSNLKLEKAHAKTPALYI 267          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 2.110e-99
Identity = 156/206 (75.73%), Postives = 167/206 (81.07%), Query Frame = 1
Query:  154 MENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWR 771
            M NEQYSSQAIH ARKKLP GAFKEVNRFL +GPHEPRVFAVDGSKVHVHPSFIGAGY TRTN+KPVPRPAK PLVMLSSMVDVKTKACVDFELTKHFNE  +                 R Y  K  LRS+HDS AFGVWRLKINAFKGTK F +S  TE TCLILGV++RL+KY I+GKTYVCLTND +LSRRDIK +YASRWR
Sbjct:    1 MGNEQYSSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPVPRPAKSPLVMLSSMVDVKTKACVDFELTKHFNEDGS-----------------RIYTQK--LRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWR 187          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 7.040e-44
Identity = 96/172 (55.81%), Postives = 105/172 (61.05%), Query Frame = 1
Query:   52 GQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAF 567
            G  +QRRRK+DTSSLFYTLTK CIQERGV HILR ++EQYSSQA+HSARKKLP GAFKE                                        PVPRPA RPLVMLSSMVD           TK FNERKA   MLR V +GDTLVFD+ YYS+ LLR+VHDS AF
Sbjct:  172 GDEIQRRRKIDTSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE----------------------------------------PVPRPATRPLVMLSSMVD-----------TKLFNERKADVSMLRSVHQGDTLVFDKEYYSRGLLRNVHDSKAF 292          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A2Z2NHE4_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NHE4_9GAMM)

HSP 1 Score: 95.9 bits (237), Expect = 7.430e-18
Identity = 81/287 (28.22%), Postives = 128/287 (44.60%), Query Frame = 1
Query:   49 DGQWMQRRRKLD--------------TSSLFYTLTKCCIQERGVAHILRMENEQ---YSSQAIHSARKKLPPGAFKEVN-RFLQRGPHEP-------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLIL-------------------GVRARLLKYFISGKTYVC---LTNDLSLSRRDIKVMYASRW 768
            D QW +R+R L+              T+   Y +T   + E+     L ++  Q    ++ A  +AR KL    FK +  + LQ+   +P       R+ AVDGSK+++    I AGY T ++N      A  P   +S + ++KTK  +DF+L  H +ERK A   L  + + D +V+DRGYYS ++L      H   ++RLK  A +  + F NS   +A   I                     +  RL+KY   G +Y+    L +    S   +  +Y SRW
Sbjct:  342 DRQWQKRQRVLNSLLIMLFIFRLVFSTNKQGYAITTAELWEQ--CRTLGIDLPQPTPVAASAFCNARAKLDEEVFKLLQVQILQQAKPDPKKLWQGHRLMAVDGSKLNLPRQLIRAGYKTPSDN------AHYPQGTVSCLYELKTKIPIDFDLASHRDERKMAISHLNSLSETDVVVYDRGYYSYDMLHEHDKRHIHPIFRLKTTACRVVEAFANSDDIDAVVQIFPSQSKRTSIPAHDPQPDYPALALRLVKYDAGGTSYILGTTLWDQKKYSIEQLSAVYHSRW 620          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A6L8GJ11_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GJ11_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 6.800e-13
Identity = 65/219 (29.68%), Postives = 107/219 (48.86%), Query Frame = 1
Query:   49 DGQWMQRRRKLDTSSLFYTLTKCCI--QERGVAHILRM-------------ENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEP------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRP-AKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEA 639
            D +WM+RRR L++  +   + +  +  +E+G A +                + E   + +I  AR+++    F +++R + R   +       RVFAVDG+K+++    + AGY       P+P+  A  P  ++S +  + TK  VDF L+    ER AA   L  +  GD +VFDRGY+S  LL +V  + A  V+RL+ N     + F     TEA
Sbjct:  342 DRRWMKRRRVLNSLIVMLFVFRLVLSRREKGYATVTAELWEQCRKLGIALPQREPVVASSICKARQRVHEELFLDLHREILRHGGDGARWKGRRVFAVDGTKMNLPRGLVDAGY-------PLPKDGAHYPQGLVSCLYRLDTKVPVDFSLSARACERTAALGHLHALEAGDVVVFDRGYFSFELLHAVIRTGAHPVFRLQANGVAAFRDFMAGDGTEA 553          
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Match: A0A658K6S8_PSEA0 (IS4 family transposase n=3 Tax=Pseudomonas amygdali TaxID=47877 RepID=A0A658K6S8_PSEA0)

HSP 1 Score: 77.8 bits (190), Expect = 4.080e-12
Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 1
Query:   61 MQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPR---------VFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKR--PLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLK 585
            + R R+   SSL      C   ++G+A       +  +  ++  AR+KLP   FK +N  L    H  R         VFA+DGSK++     +  GY T       PR   R  P  M+S + +++ +   DFEL  H +ER+   E L  + +GD ++FDRGY+S  +L  V  S    V+RL+
Sbjct:   16 LSRTRQGYGSSLGVLWESCA--DKGIA---LPRTDAVAPSSLCEARQKLPEAVFKTLNDELISLWHAHRDTPTWKGHRVFAIDGSKINAPRGLLEYGYKT-------PRETTRHYPCAMMSGLYNLQEQLIYDFELVPHNDERRCVPEHLAKLERGDLVIFDRGYFSYQILHEVLASGQHAVFRLQ 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LP60_ECTSI2.990e-18598.83EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
D8LP47_ECTSI3.720e-18096.11EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNB6_ESV1K1.420e-15684.05EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5K772_9PHAE4.700e-14683.74DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE1.670e-13672.63DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE2.110e-9975.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T1_9PHAE7.040e-4455.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2Z2NHE4_9GAMM7.430e-1828.22Uncharacterized protein n=1 Tax=Granulosicoccus an... [more]
A0A6L8GJ11_9BACT6.800e-1329.68IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]
A0A658K6S8_PSEA04.080e-1231.18IS4 family transposase n=3 Tax=Pseudomonas amygdal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:206940..208042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1046724.KB889834_gene1048
PFAMsDDE_Tnp_1,Nterm_IS4
Model size1103
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.39e-18
EggNOG OGsCOG3385@1|root,COG3385@2|Bacteria,1MVRM@1224|Proteobacteria,1RRFT@1236|Gammaproteobacteria,464GA@72275|Alteromonadaceae
DescriptionCOG3385 FOG Transposase and inactivated derivatives
Cds size795
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789712.2049093-UTR-P-littoralis_Contig15:206939..2072471680789712.2049093-UTR-P-littoralis_Contig15:206939..207247Pylaiella littoralis U1_48UTRP-littoralis_Contig15 206940..207247 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789712.2186415-CDS-P-littoralis_Contig15:207247..2080421680789712.2186415-CDS-P-littoralis_Contig15:207247..208042Pylaiella littoralis U1_48CDSP-littoralis_Contig15 207248..208042 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.92.1prot_P-littoralis_Contig15.92.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 207248..208042 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.92.1

>prot_P-littoralis_Contig15.92.1 ID=prot_P-littoralis_Contig15.92.1|Name=mRNA_P-littoralis_Contig15.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=265bp
MTKPMSPEIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHIL
RMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHV
HPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFN
ERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFK
GTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKV
MYASRWRWRNPSND*
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mRNA from alignment at P-littoralis_Contig15:206940..208042-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.92.1 ID=mRNA_P-littoralis_Contig15.92.1|Name=mRNA_P-littoralis_Contig15.92.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1103bp|location=Sequence derived from alignment at P-littoralis_Contig15:206940..208042- (Pylaiella littoralis U1_48)
ATGACTAAACCGATGTCTCCTGAAATATACGATGCTTTTAAAAAGTGCGA CGGACAGTGGATGCAGAGACGACGAAAGCTAGATACATCTTCCCTTTTCT ACACGCTCACTAAGTGTTGTATTCAAGAGAGAGGTGTCGCTCACATACTG AGGATGGAAAACGAACAGTACTCGTCCCAGGCGATACATTCGGCCAGGAA GAAGCTTCCACCAGGGGCTTTCAAGGAAGTAAACCGGTTCTTGCAACGAG GACCACATGAACCACGTGTGTTCGCCGTAGATGGTTCGAAAGTGCACGTG CACCCTTCGTTCATCGGGGCTGGATATATGACCCGGACGAACAATAAACC GGTCCCGCGTCCCGCGAAAAGACCTCTTGTCATGCTTTCTTCGATGGTGG ACGTAAAAACAAAAGCGTGTGTGGACTTTGAGCTCACGAAACACTTCAAC GAAAGAAAGGCAGCCACTGAGATGCTCCGAGGTGTACGGAAAGGGGATAC TCTGGTGTTTGACAGAGGCTACTACTCCAAGAACTTGCTGCGAAGCGTTC ATGACTCGCATGCGTTTGGGGTTTGGCGACTCAAGATAAATGCGTTCAAA GGCACTAAGCCTTTCTTCAACTCGTGTCACACGGAAGCAACATGCCTTAT TCTTGGTGTCAGGGCGCGTCTCTTGAAGTATTTTATTTCTGGTAAAACAT ATGTTTGCCTGACGAACGATCTATCGCTATCTCGGAGGGATATCAAGGTC ATGTACGCGTCGAGGTGGCGGTGGAGGAATCCTTCAAACGATTGAAATCA AACCTCAAACTTGAGAAAGCACATGCCAAAACTCCGGCTCTTTATATTCA GGAGGTAGAAGCGCGGGTCTTGTTAGACACAATCACACTGAGGTTGCAAA AATCGATGAAGGAACCATCGTATATCTACACACTTGATACATACGTCACA CATATCCTTAACAACGTCAAGAGAGTTTCGAATCCCGTGAAATTGAGCGC ACATTCTGAAGCAGATGTGTTCTCCAAGAAGCGAAGTCGCTTGTGCCATG GTCGCATATATGATCATCATCGCCACGGACCGATTTTTTCAGACAAACTG ACT
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:206940..208042-

>mRNA_P-littoralis_Contig15.92.1 ID=mRNA_P-littoralis_Contig15.92.1|Name=mRNA_P-littoralis_Contig15.92.1|organism=Pylaiella littoralis U1_48|type=CDS|length=795bp|location=Sequence derived from alignment at P-littoralis_Contig15:206940..208042- (Pylaiella littoralis U1_48)
ATGACTAAACCGATGTCTCCTGAAATATACGATGCTTTTAAAAAGTGCGA
CGGACAGTGGATGCAGAGACGACGAAAGCTAGATACATCTTCCCTTTTCT
ACACGCTCACTAAGTGTTGTATTCAAGAGAGAGGTGTCGCTCACATACTG
AGGATGGAAAACGAACAGTACTCGTCCCAGGCGATACATTCGGCCAGGAA
GAAGCTTCCACCAGGGGCTTTCAAGGAAGTAAACCGGTTCTTGCAACGAG
GACCACATGAACCACGTGTGTTCGCCGTAGATGGTTCGAAAGTGCACGTG
CACCCTTCGTTCATCGGGGCTGGATATATGACCCGGACGAACAATAAACC
GGTCCCGCGTCCCGCGAAAAGACCTCTTGTCATGCTTTCTTCGATGGTGG
ACGTAAAAACAAAAGCGTGTGTGGACTTTGAGCTCACGAAACACTTCAAC
GAAAGAAAGGCAGCCACTGAGATGCTCCGAGGTGTACGGAAAGGGGATAC
TCTGGTGTTTGACAGAGGCTACTACTCCAAGAACTTGCTGCGAAGCGTTC
ATGACTCGCATGCGTTTGGGGTTTGGCGACTCAAGATAAATGCGTTCAAA
GGCACTAAGCCTTTCTTCAACTCGTGTCACACGGAAGCAACATGCCTTAT
TCTTGGTGTCAGGGCGCGTCTCTTGAAGTATTTTATTTCTGGTAAAACAT
ATGTTTGCCTGACGAACGATCTATCGCTATCTCGGAGGGATATCAAGGTC
ATGTACGCGTCGAGGTGGCGGTGGAGGAATCCTTCAAACGATTGA
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