mRNA_P-littoralis_Contig15.88.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.88.1 vs. uniprot
Match: Q8QNM4_ESV1K (EsV-1-40 n=2 Tax=root TaxID=1 RepID=Q8QNM4_ESV1K) HSP 1 Score: 687 bits (1772), Expect = 6.610e-245 Identity = 333/492 (67.68%), Postives = 401/492 (81.50%), Query Frame = 1
Query: 19 ISQNLLGHVSRWQTETIEALRLNNSAFFDMAWLFQGVYFKDSRHVYASRSDYFTCLFRNDMRKGTDVFEGVTAFRVSDPMSKKHIFDMMRIFCHTGIVQVDKGESILKTMERYSAFHYYGIRGGMEVIRQLAMDVINPTNAVQALEYAMSSPECL---ESPNDTGLLSDIKNYIAIYAFVVFKHKSFYSLASENLGGLAQICTRDDLNIREIDLLHCIYRLCERKIGTDRDLQELGSAWEVMTHDFDESGS-LWSQVRLSSITMREFVKFIKENKNCFSSDNVVKIITFLYSCAET------DGESSRHDEDMGVHANADXXXXXXKKKRKPFRPISFYPRNLEFHGLASPQTDISFWDDSKIKLFFAFDSAKKEAAALPPVHFHNFFVHCSVFHADKSINVAGNIHGKS-VGGACEQVTITSSVVNFRHDRWRKKAVVSPLTGGTAFRITNILSWNTIGNNDTPGYLFDIEQYPEYSPNGSWILLCICIER 1461
ISQNLLG+VSRWQ ETIEAL+ NN+ FFDMAWLF GVY++D + +Y+SRSDYF CLF + MRKGT+ FEGVTA+ VS PMSK+HIFDMMR+FCHTG+VQVDKGE ILKTMERYSAFHYY ++GGM VIRQL MDVINPTNA+QALEYAMSS C + ++ GLLSDI++YI+IYAFVVFKHKSFY+L ++++ G++QIC RDDLNI+EIDLL C+Y+LCE+K+ D LGSAW +MT D E GS LWS++RLSSI+MREFVKFIKENK CFSSDN +KIITFLYSCA+ +S +DE +GVH + KKRK F+PISFYPRNLEFHGLASPQTDIS+WDDSKIKLF AFD + KEA LPPVHFH+ F+HC+V+HAD+S+NV+GNIHGK+ +T+T+SVVNFRHDRWRKK V++ L+ GTAF+I ILS NTI NNDT GYLFDIE+YPEYSP G+WIL+ +CIE+
Sbjct: 5 ISQNLLGYVSRWQLETIEALQANNADFFDMAWLFDGVYYRDCKQLYSSRSDYFKCLFSSSMRKGTEEFEGVTAYSVSHPMSKRHIFDMMRVFCHTGMVQVDKGEPILKTMERYSAFHYYSLQGGMNVIRQLVMDVINPTNAIQALEYAMSSAVCSGDGDGDSNAGLLSDIQDYISIYAFVVFKHKSFYALRADSIPGVSQICARDDLNIKEIDLLQCVYKLCEKKVSADNKPGGLGSAWALMTDDAAERGSSLWSKIRLSSISMREFVKFIKENKQCFSSDNALKIITFLYSCADAAAADTPPSSASANDEVVGVHLS---------KKRKTFQPISFYPRNLEFHGLASPQTDISYWDDSKIKLFVAFDFSSKEAMTLPPVHFHSVFIHCTVYHADRSLNVSGNIHGKTNKSDPSVNITVTASVVNFRHDRWRKKNVLASLSSGTAFKIPTILSSNTIANNDTHGYLFDIERYPEYSPKGTWILMSLCIEK 487
BLAST of mRNA_P-littoralis_Contig15.88.1 vs. uniprot
Match: A0A6H5KJD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD3_9PHAE) HSP 1 Score: 332 bits (850), Expect = 2.920e-103 Identity = 160/228 (70.18%), Postives = 191/228 (83.77%), Query Frame = 1
Query: 61 ETIEALRLNNSAFFDMAWLFQGVYFKDSRHVYASRSDYFTCLFRNDMRKGTDVFEGVTAFRVSDPMSKKHIFDMMRIFCHTGIVQVDKGESILKTMERYSAFHYYGIRGGMEVIRQLAMDVINPTNAVQALEYAMSSPECL-ESPNDTGLLSDIKNYIAIYAFVVFKHKSFYSLASENLGGLAQICTRDDLNIREIDLLHCIYRLCERKIGTDRDLQELGSAWEVMTH 741
ETIE L+ NNS FDMAW+FQGV++ D RH +SRSDYF CLF NDMRKGT+ FEGV A +VSDP+SK+HIFDMMR+FC+TGIVQVDKGE ILKTMERYSAFHYY +RGGM+VIRQL MDVINP+NA+QALEYAM+S C E +D GLLSDI +YIAIYA VVFKHKSFY+L E++ G++QIC RDDLNIREIDLL C+++LCE++I D+D L SAWE++ H
Sbjct: 416 ETIETLKCNNSDSFDMAWMFQGVFYNDCRH--SSRSDYFKCLFLNDMRKGTEKFEGVKANKVSDPISKRHIFDMMRVFCYTGIVQVDKGEPILKTMERYSAFHYYSLRGGMDVIRQLVMDVINPSNAIQALEYAMNSVVCSGEDGSDRGLLSDISDYIAIYALVVFKHKSFYALGFESIPGISQICARDDLNIREIDLLQCVFKLCEKRIHADKDGHGLRSAWELILH 641
BLAST of mRNA_P-littoralis_Contig15.88.1 vs. uniprot
Match: B5LWK4_9PHYC (Putative transcription regulator n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK4_9PHYC) HSP 1 Score: 284 bits (726), Expect = 2.680e-87 Identity = 170/483 (35.20%), Postives = 265/483 (54.87%), Query Frame = 1
Query: 25 QNLLGHVSRWQTETIEALRLNNSAFFDMAWLFQG--VYFKDSRHVYASRSDYFTCLFRNDMRKGTDVFEGVTAFRVSDPMSKKHIFDMMRIFCHTGIVQVDKGESILKTMERYSAFHYYGIRGGMEVIRQLAMDVINPTNAVQALEYAMSSPECLESPNDTGLLSDIKNYIAIYAFVVFKHKSFYSLASENLGGLAQICTRDDLNIREIDLLHCIYRLCERKIGTDRDLQELGSAWEVMTH-DFDESG-SLWSQVRLSSITMREFVKFIKENKNCFSSDNVVKIITFLYSCAETDGESSRHDEDMGVHANADXXXXXXKKKRKPFRPISFYPRNLEFHGLASPQTDISFWDDSKIKLFFAFDSAKKEAAALPPVHFHNFFVHCSVFHADKSINVAGN-IHGKSVGGACEQVTITSSVVNFRHDRWRKKAVVSPLTGGTAFRITNILSWNTIGNNDTPGYLFDIEQYPEYSPNGSWILLCICIE 1458
Q L V WQ I L + + DM W Y +D R Y S + LF + KG + V +R+S+ K HIF M+R+FCHTG+V+ K ++IL+T+ERY+AF +YGI G +++L +D + P+N++ A EYA+ D GLL DI YI YAF+VF+ KSF + E+L L +C D LN+ EIDLL + RLCE+K+ +++ E S + ++TH ++ SG SL+ +RLSS++M EF+ ++ ++D +V+++ ++ +G S KKRK F+ +S YPRNL FH + SPQ ++S+ K+ + F K+ +LP ++F ++ + +V + DK + ++G I K A + IT+S+VNFRHDRW+K G+ F+I NILS N I + GYLFD+ +YP++S GS ++L + E
Sbjct: 8 QYLCEAVDGWQRNRIVELENDALQYTDMVWKLDDGETYLRDCRSAYTC-SSFMRTLFETTVGKGEKSRDEVPMYRLSE---KSHIFAMIRVFCHTGLVRFGKSDTILRTIERYAAFQFYGIEIGSATLKRLVLDSLGPSNSMVAFEYAVHR-------QDRGLLQDIVAYIRNYAFLVFRQKSFLGIRRESLAELVHLCDSDSLNVPEIDLLSHLIRLCEKKLD-EKEFTEFDSPFAILTHREWGTSGKSLFDALRLSSLSMEEFMSLALKHPGAMNNDQIVQVMRAIH---RPEGSS---------------------KKRKKFQIVSAYPRNLTFHPVESPQMEVSYCQRDKVLAHYVFQFLPKKDVSLPTLNFGSYQIRITVVYRDKVLGISGQAISPKQESRA--DLRITASMVNFRHDRWKKSTTA---LSGSVFQIPNILSCNAIEGSS--GYLFDVAEYPDFSDGGSCLMLSLACE 447
BLAST of mRNA_P-littoralis_Contig15.88.1 vs. uniprot
Match: Q6XM46_9PHYC (FirrV-1-A41 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM46_9PHYC) HSP 1 Score: 263 bits (671), Expect = 1.180e-78 Identity = 168/496 (33.87%), Postives = 259/496 (52.22%), Query Frame = 1
Query: 31 LLGHVSRWQTETIEALRLNNSAFFDMAWLFQGV--YFKDSRHVYASRSDYFTCLFRNDMRKGTDVFEGVTAFRVSDPMSKKHIFDMMRIFCHTGIVQVDKGESILKTMERYSAFHYYGIRGGMEVIRQLAMDVINPTNAVQALEYAMSSPECLESPNDTGLLSDIKNYIAIYAFVVFKHKSFYSLASENLGGLAQICTRDDLNIREIDLLHCIYRLCERKIGTDRDLQELGSAWEVMTHDFDESG-SLWSQVRLSSITMREFVKFIKENKNCFSSDNVVKIITFLYSCAETDGESSRHDEDMGVHANADXXXXXXKKKRKPFRPISFYPRNLEFHGLA-SPQTDISFWDDSKIKLFFAFD---SAKKEAAALPPVHFHNFFVHCSVFHADKSINVAGNIH---GKSVGGACE---------QVTITSSVVNFRHDRWRKKAVVSPLTGGTA----FRITNILSWNTIGNN-DTP-GYLFDIEQYPEYSPNGSWILL 1443
L G V WQ I L N + DMAW G +D R V+ S + T F+ + +G+ + +S+ K IF M+RIFCHTG++ DK +SIL TMERY+AF +YGI G +++ ++ + P+N+V A EYA+ +D LL++IK Y++ YAF+VF+ KSF + E+ L +C D+LN++EIDL C++RLCE+K +++ E SA+ +MTH + SL+ +RL SITM E + F+ ++ ++D +V+I+ +H D + KRK F+ +S YPR L F+ + +PQ D+S K+ F F K ALPP+ F + VH ++ + D++I + G IH G + + ++ + ++NFRH+RW+K +V ++ FRI NILS N I + TP GYLFD+ YPEYS + LL
Sbjct: 7 LCGAVEEWQQHRIRDLLDNTLQYPDMAWKLNGEDDSIRDCR-VFYECSTFLTNYFQTSVGTAKTNADGLPLYTLSE---KPAIFSMIRIFCHTGLMCFDKTDSILTTMERYAAFQFYGIEMGSATLKRHVLESLTPSNSVLAFEYAVHR-------HDDSLLAEIKAYMSHYAFIVFRQKSFLGIGKESFHQLVSLCDSDNLNMKEIDLFSCLFRLCEKK-NSEKGFAEFDSAFSIMTHTRSQGEKSLYDTLRLHSITMEEVMSFVHKHPAALNNDQIVQIM-------------------REIHQPGD------RPKRKKFQAVSSYPRYLNFNAVVGNPQVDVSHRQTGKMMAHFVFPFTPGRTKSDVALPPIAFGAYQVHANMVYTDRTIGITGQIHATEGTGINSSSXXXXXXXXNTKIRVVCYIINFRHERWKKSSVCLDVSNTLYQYLDFRIPNILSCNAIERSCGTPTGYLFDVTCYPEYSEQDAASLL 465 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.88.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.88.1 >prot_P-littoralis_Contig15.88.1 ID=prot_P-littoralis_Contig15.88.1|Name=mRNA_P-littoralis_Contig15.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=488bp MDKTIKISQNLLGHVSRWQTETIEALRLNNSAFFDMAWLFQGVYFKDSRHback to top mRNA from alignment at P-littoralis_Contig15:196151..197614+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.88.1 ID=mRNA_P-littoralis_Contig15.88.1|Name=mRNA_P-littoralis_Contig15.88.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1464bp|location=Sequence derived from alignment at P-littoralis_Contig15:196151..197614+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:196151..197614+ >mRNA_P-littoralis_Contig15.88.1 ID=mRNA_P-littoralis_Contig15.88.1|Name=mRNA_P-littoralis_Contig15.88.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1464bp|location=Sequence derived from alignment at P-littoralis_Contig15:196151..197614+ (Pylaiella littoralis U1_48)back to top |