mRNA_P-littoralis_Contig15.80.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Match: Q8QNL6_ESV1K (EsV-1-50 n=3 Tax=root TaxID=1 RepID=Q8QNL6_ESV1K) HSP 1 Score: 533 bits (1373), Expect = 1.970e-186 Identity = 288/422 (68.25%), Postives = 323/422 (76.54%), Query Frame = 1
Query: 1 TMQFELKSAFSAKASWDSVVAEESYTIRWKTQDTEAKEATTTTPAIVLVNLEPDTSYEVTVLSSDSTVVGSGAVQTWPADDPHLDNLYASVRLEDGTYDATQFDKTVHDIFLKYFNDIVQDGDTIYTSVILKGAPKNVETKAVVEGSTTDVSGDQNLFLPFTKDSEAPQVVTLANAVPTDGTTVTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----MVTVADGSIVLVFEDTVAKTYPFETSTASNVVGSLGSQFAKNVTCSVINVVGSKTTGVSGNTSSSGWIYDTEADTITEATRIVHTIDGDSQSGTLSFGVLHTDANANAFIEPVIECAPGSTTISAQDDSDNTASTTIDSTGISFDTDDASIYFGAGKKFRLIFRDGTPSTLAIESYDADTGTYLTRSEFSDAT 1251
++QFELKSAFS K SWDS ++Y ++W TQ + KE T +T AI LVNLEPDTSY+V V S+ S V S QTW +DPHL+NLYASVRLEDGTYDATQFDK+VHD+FLKYFNDIVQ+GDTIY SVILKGAPKN+ET+AV EGSTTDV GDQNLFLPF++DS + QVVTL+N++P D T MVTVADGSIVLVFEDTVAK YPF TSTASNV+G+LGSQFAKN TC+VINVVGSKTTG SG+T SS W+YDTE DTI EATRIVHTID DS +GT+S GV HTDAN+N FIEPV+ CA GSTTISAQDDSDNT STTID TGISFDTDDA IYFGA +KFR+IFRDGTPSTLAIESYDADTGTY+TRSEFSDAT
Sbjct: 2 SLQFELKSAFSVKISWDSFDESDAYAVQW-TQSSVQKETTVSTSAIALVNLEPDTSYDVRVTSASSNTVLSDEFQTWSLEDPHLENLYASVRLEDGTYDATQFDKSVHDVFLKYFNDIVQNGDTIYASVILKGAPKNIETRAVTEGSTTDVVGDQNLFLPFSRDSGSAQVVTLSNSIPIDDVEATAVSDVAVAQDLGGDVELLYTPESDTFTIGNNVYGVGDKFNLFGKMVTVADGSIVLVFEDTVAKVYPFNTSTASNVIGTLGSQFAKNYTCNVINVVGSKTTGASGDTYSSSWVYDTETDTIAEATRIVHTIDEDSANGTISIGVRHTDANSNTFIEPVVTCASGSTTISAQDDSDNTVSTTIDPTGISFDTDDACIYFGAAQKFRIIFRDGTPSTLAIESYDADTGTYMTRSEFSDAT 422
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Match: B5LWF4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF4_9PHYC) HSP 1 Score: 287 bits (735), Expect = 6.970e-90 Identity = 180/421 (42.76%), Postives = 250/421 (59.38%), Query Frame = 1
Query: 4 MQFELKSAFSAKASWDS-VVAEESYTIRWKTQDTEAKEATTTTPAIVLVNLEPDTSYEVTVLSSDSTVVGS-GAVQTWPADDPHLDNLYASVRLEDGTYDATQFDKTVHDIFLKYFNDIVQDGDTIYTSVILKGAPKNVETKAVV-EGSTTDVSGDQNLFLPF-TKDSEA-PQVVTLANAVPTDGTTVTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVTVADGSIVLVFEDTVAKTYPFETSTASNVVGSLGSQFAKNVTCSVINVVGSKTTGVSGNTSSSGWIYDTEADTITEATRIVHTIDGDSQSGTLSFGVLHTDANANAFIEPVIECAPGSTTISAQDDSDNTASTTIDSTGISFDTDDASIYFGAGKKFRLIFRDGTPSTLAIESYDADTGTYLTRSEFSDAT 1251
M F+L SAFSA+ W + A + + + A + + A+V+VNLEP T+Y V+V S+++ G+ T +++P L LY+S+R +G +D T+FD +HDIF++ F+ IV GD I V++ GAP+ V T A EGS+ DV + N+FLPF K EA Q VTL + D T V S VTVADGSIVL+F DTVAKT+PF+ S A +VVGS GS F KN+TC+ N+VG K G +G+T +S WI++T+ + E +R+VH +D DS + TLS GVLHTD++ FIEP + +TTISAQ+D + T S T STG+SFDTDDA+IYFG+ + FR+ F GTPS L I+S+D + +Y+TR EF+DAT
Sbjct: 20 MDFDLVSAFSARIFWKADFTAASVHCVASGSAKPIAAQCSNDEAAVVVVNLEPGTTYAVSVRSAETKSPDLYGSFTTKSSENPELSALYSSIRTPEGIFDTTRFDTKLHDIFVENFSSIVSPGDRILAKVVVNGAPQEVMTVAASGEGSSFDVDAESNIFLPFHRKTGEALVQTVTLRHPTSADATLVYDSSTDNLAYGGDHYGVGDKFELFNRT--------------VTVADGSIVLLFSDTVAKTWPFDASKALSVVGSAGSHFMKNITCNTHNLVGQKIDGETGSTYNSAWIHNTDDSSTLEVSRMVHEVDEDSANATLSLGVLHTDSSNQKFIEPALSLQATATTISAQNDDEQTTSATFQSTGLSFDTDDAAIYFGSSQNFRIKFSSGTPSVLQIQSFDDASDSYITRQEFTDAT 426
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Match: Q6XLY0_9PHYC (FirrV-1-B56 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLY0_9PHYC) HSP 1 Score: 277 bits (709), Expect = 3.410e-86 Identity = 171/381 (44.88%), Postives = 223/381 (58.53%), Query Frame = 1
Query: 133 AIVLVNLEPDTSYEVTVLSSDSTVVGS----GAVQTWPADDPHLDNLYASVRLEDGTYDATQFDKTVHDIFLKYFNDIVQDGDTIYTSVILKGAPKNVETKAVVEGSTTDVSG--DQNLFLPFTK--DSEAPQVVTLANAVPTDGTTVTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVTVADGSIVLVFEDTVAKTYPFETSTASNVVGSLGSQFAKNVTCSVINVVGSKTTGVSGNTSSSGWIYDTEADTITEATRIVHTIDGDSQSGTLSFGVLHTDANANAFIEPVIECAPGSTTISAQDDSDNTASTTIDSTGISFDTDDASIYFGAGKKFRLIFRDGTPSTLAIESYDADTGTYLTRSEFSDAT 1251
AIV+VNL DT+Y V S +ST S G T P D P L NLYAS+R DG YD T F+K +HD+FL++F+ IV GD I+ V + G +NV A EG ++ D N+FLPF +SEA Q VTL N VTVADGSIVL+F DTVAKT+PF+ S A VVGS GS F KN+TC+V N+VG KTTG SG+T SS W+ + + E +R+VH +D S +GTLS GVL+TD++ FIEP + STTISAQ+D++ T S T +S G+SFDTDDA+IYFG+ ++FR+ F DGTPS L I+S+D T +Y+TR E +D++
Sbjct: 46 AIVIVNLHADTTYHV---SLESTAPESQRLTGHFVTCPKDQPCLANLYASIRRPDGVYDTTSFEKELHDVFLQHFSTIVSPGDRIFAKVEVNGVSQNVMAIAATEGVELEIDAAPDTNVFLPFFPGDNSEAVQTVTLKNK-------------NHESLETLVYDAHTDKLAYGGDAYSVGDKFQMFNKTVTVADGSIVLLFSDTVAKTWPFDASKALAVVGSAGSHFMKNITCNVQNLVGQKTTGESGSTYSSAWVTNADDSNTLEVSRMVHELDDTSTTGTLSLGVLYTDSSNQQFIEPALALQATSTTISAQNDAEQTTSATFESKGLSFDTDDAAIYFGSSQRFRIKFSDGTPSALQIQSFDDTTSSYITRQEVTDSS 410
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Match: Q6XLT5_9PHYC (FirrV-1-N1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT5_9PHYC) HSP 1 Score: 277 bits (709), Expect = 3.520e-86 Identity = 175/426 (41.08%), Postives = 248/426 (58.22%), Query Frame = 1
Query: 4 MQFELKSAFSAKASW--DSVVAEESYTIRWKTQDTEAKEATTTTPAIVLVNLEPDTSYEVTVLSS-DSTVVGSGAVQTWPADDPHLDNLYASVRLEDGTYDATQFDKTVHDIFLKYFNDIVQDGDTIYTSVILKGAPKNVETKAVVEGST--TDVSGDQNLFLPFT-----KDSEAPQVVTLANAVPTDGTTVTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVTVADGSIVLVFEDTVAKTYPFETSTASNVVGSLGSQFAKNVTCSVINVVGSKTTGVSGNTSSSGWIYDTEADTITEATRIVHTIDGDSQSGTLSFGVLHTDANANAFIEPVIECAPGSTTISAQDDSDNTASTTIDSTGISFDTDDASIYFGAGKKFRLIFRDGTPSTLAIESYDADTGTYLTRSEFSDAT 1251
M F+L+SA+S + W D V + + A + A+V+VNL P T+Y VTV S+ D++ +G T A +P L NLY+S+R DG YD T+F+K +HD+FL+ F+ +V GD I V + G ++V T A EGS DV N+FLPF KD+E Q V L D T V VTVADGSIVL+F DTVAK++PF+ + A +VVGS GS F KN+TC+V N+VG KT G +G+T +S WI++T+ + E +R+VH +D +S +GTLS GVL+TD+++ FIEP + S TIS+Q+D++ T S T +S G++FDTDDA+IYFG+ + FR+ F GTPS L I+SYD +T +Y+TR EF+D++
Sbjct: 1 MDFDLRSAYSVRVFWKADYVPSTVMCYPLGRPDQVIAAQCVDREAAVVVVNLSPSTTYHVTVKSARDTSADLNGQFVTMSAANPCLHNLYSSIRTTDGIYDTTRFEKELHDVFLENFSGVVSPGDRILAKVDVNGLSQHVLTVAATEGSDLEVDVDAQANVFLPFCSKHKDKDTEDIQTVVL-KTTGEDATLV--------------YDGHTNSVAYGGDAYSTGDKFQLFNRTVTVADGSIVLLFADTVAKSWPFDATKALSVVGSAGSHFMKNITCNVHNLVGQKTDGTTGSTYNSAWIHNTDDSSTLEVSRMVHELDEESANGTLSLGVLYTDSSSQQFIEPALSLQATSCTISSQNDAEQTTSATFESRGLTFDTDDAAIYFGSSQSFRIKFSSGTPSVLQIQSYDDNTSSYITRQEFTDSS 411
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Match: B5LWJ5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWJ5_9PHYC) HSP 1 Score: 73.6 bits (179), Expect = 1.930e-10 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 874 IYDTEADTITEATRIVHTIDGDSQSGTLSFGVLHTDANANAFIEPVIECAPGSTTISAQDDSDNTASTTIDSTGISFDTDDASIYFGAGKKFRLIFRDGT---PSTLAIESYDADTGTYLTR 1230
+YD + TE R+ H + D G S +LH+D N V+ +T I+ D D + TT DS+G+SFD+D+ SIYFGAGK FR+ F D P+ L ++S TG Y+TR
Sbjct: 370 VYDPDTGVTTEFARVGHGLSADGL-GEFSVDLLHSDTLVN-----VLSADTSTTRITTTQDDDVSMQTTFDSSGLSFDSDNGSIYFGAGKDFRIHFSDAVSDDPAMLKVQSLSDTTGEYVTR 485
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Match: Q6XM60_9PHYC (FirrV-1-A27 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM60_9PHYC) HSP 1 Score: 63.5 bits (153), Expect = 1.660e-8 Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 871 WIYDTEADTITEATRIVHTIDGDSQSGTLSFGVLHTDANANAFIEPVIECAPGSTTISAQDDSDNTA-STTIDSTGISFDTDDASIYFGAGKKFRLIFRDGTPSTLAIESYDADTGT-YLTR 1230
++YD+ TE TR+++ + G VL N V+ P ST I+ +D +DN++ +DSTG+SFD+D+ SIYFGA K FR+ F + + A+ + +GT Y+TR
Sbjct: 25 FVYDSANSATTECTRVLNGLSSSGDRGLFEVNVLQDSTMVN-----VLSTDPSSTCITTRDSTDNSSMKINLDSTGLSFDSDNGSIYFGADKDFRIHFTEADATNPAMLQIQSLSGTEYVTR 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.80.1 >prot_P-littoralis_Contig15.80.1 ID=prot_P-littoralis_Contig15.80.1|Name=mRNA_P-littoralis_Contig15.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=417bp MQFELKSAFSAKASWDSVVAEESYTIRWKTQDTEAKEATTTTPAIVLVNLback to top mRNA from alignment at P-littoralis_Contig15:189515..190768- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.80.1 ID=mRNA_P-littoralis_Contig15.80.1|Name=mRNA_P-littoralis_Contig15.80.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig15:189515..190768- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:189515..190768- >mRNA_P-littoralis_Contig15.80.1 ID=mRNA_P-littoralis_Contig15.80.1|Name=mRNA_P-littoralis_Contig15.80.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1251bp|location=Sequence derived from alignment at P-littoralis_Contig15:189515..190768- (Pylaiella littoralis U1_48)back to top |