mRNA_P-littoralis_Contig15.77.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.77.1 vs. uniprot
Match: D8LP88_ECTSI (EsV-1-55 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP88_ECTSI) HSP 1 Score: 320 bits (820), Expect = 7.270e-106 Identity = 163/324 (50.31%), Postives = 217/324 (66.98%), Query Frame = 1
Query: 1 MKHKYTWNHILLFAKVCGQVDDGDSVTASWVRVTEDHNMQTFPFTLWPLTYRTCEVTTSPAMCSPIHLSSEELGCNYDVKIYKCNEVMIVC----FQDKPSDSVCQHPCIVDLDD-----------ATADETHVDHHSCSKTEPLLPCHVVHCYHQMETRIKDAFYQLEKNIESVVCIGHGASATMAVCLASDMSRTYETEKDFLGLDARRVVVDVVGFSDSVVASPAYWDRFCSFIDEYISLGFANSAKSASYPGVVKMVVNPRSNHVTVDR--SQGPV--RAPSVFRRLKTKTKSSKSSAAPSE---HISDYIQALDKKIAV 906
MK++YTWNH+LL AKVCG+ DD DSVTASWV++TE+HN QTFPFTLWPLTYRTCEVTTSPAMC+P+ + + + Y VK++K NEV+IVC FQD SVC HPC+ + D ++ E HVD HS SKTEPLL CHV HCY++M+ ++ D Y ++ N+E V+C G+G +A MA C+A DMSR+YE EK+FLGL+ RV+VD VGFSD +VASP YW + ID+YI + F A + + V +V NP S VT+D + P R+ SV +L+ KTK + + P + IS+YI AL+ K+ +
Sbjct: 1 MKYEYTWNHLLLLAKVCGKTDDDDSVTASWVQITEEHNKQTFPFTLWPLTYRTCEVTTSPAMCTPVQVRTTD----YTVKVFKANEVVIVCIQDSFQDSSRGSVCSHPCLAEFDGDGHTGSGSDFLSSDAENHVDKHSLSKTEPLLSCHVAHCYNRMKAKVNDVIYDIQDNVECVICTGYGEAAAMASCVACDMSRSYEAEKEFLGLETTRVLVDFVGFSDGIVASPTYWKQNSVSIDKYILVVFEGQASATT--SVANLVANPHSLRVTIDAFPANPPAMSRSMSVLAKLRDKTKRERKTKQPKQLARRISEYIIALNNKVNI 318
BLAST of mRNA_P-littoralis_Contig15.77.1 vs. uniprot
Match: Q8QNL2_ESV1K (EsV-1-55 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNL2_ESV1K) HSP 1 Score: 308 bits (789), Expect = 3.870e-101 Identity = 157/328 (47.87%), Postives = 217/328 (66.16%), Query Frame = 1
Query: 1 MKHKYTWNHILLFAKVCGQVDDGDSVTASWVRVTEDHNMQTFPFTLWPLTYRTCEVTTSPAMCSPIHLSSEELGCNYDVKIYKCNEVMIVC----FQDKPSDSVCQHPCIVDLD-----------DATADETHVDHHSCSKTEPLLPCHVVHCYHQMETRIKDAFYQLEKNIESVVCIGHGASATMAVCLASDMSRTYETEKDFLGLDARRVVVDVVGFSDSVVASPAYWDRFCSFIDEYISLGFANSAKSASYPGVVKMVVNPRSNHVTVDR--SQGPV--RAPSVFRRLKTKTKSSKSSAAPSEH-------ISDYIQALDKKIAV 906
MK++YTWNH+LL A+VCG+ DD DSVTASWV++TE+HN QTFPFTLWPLTYRTCEVTTSPAMC+P+ + + + Y VK++K NEV+IVC FQD DSVC HPC+ + D + E HVD HS SK+EPLLPCH HCY++M+ ++ D Y ++ +++ V+C G+G +A MA C+A DMS++YE EK+FLGL+ RV VD VGFSD ++ASP YW + ID+YI + F + + V +VVNP S VT+D + P R+ SVF +L+ KTK+ + ++ IS+Y+ AL+ K+ +
Sbjct: 1 MKYEYTWNHLLLLARVCGKTDDDDSVTASWVQITEEHNRQTFPFTLWPLTYRTCEVTTSPAMCTPVQVRTTD----YIVKVFKANEVVIVCIQDSFQDSSCDSVCSHPCLAEFDGDNLTGSGSELSPSNAENHVDKHSPSKSEPLLPCHTAHCYNRMKAKVNDVIYDIQDSVDCVICTGYGEAAAMASCVACDMSQSYEAEKEFLGLETTRVRVDFVGFSDCIIASPTYWKQNSVSIDQYILVVFEDQEATT----VGNLVVNPYSLRVTIDALPANPPAMSRSMSVFAKLRDKTKTKRDKKTKTKQPNKLARSISEYVVALNNKVTL 320
BLAST of mRNA_P-littoralis_Contig15.77.1 vs. uniprot
Match: Q6XLZ7_9PHYC (FirrV-1-B39 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLZ7_9PHYC) HSP 1 Score: 150 bits (379), Expect = 8.380e-40 Identity = 81/245 (33.06%), Postives = 132/245 (53.88%), Query Frame = 1
Query: 10 KYTWNHILLFAKVCGQVDDGDSVTASWVRVTEDHNMQTFPFTLWPLTYRTCEVTTSPAMCSPI--HLSSEELGCNYDVKIYKCNEVMIVCFQDKPSDSVCQHPCIVDLDDATADETHVDHHSCSKTEPLLPCHVVHCYHQMETRIKDAFYQLEKN-IESVVCIGHGASATMAVCLASDMSRTYETEKDFLGLDARRVVVDVVGFSDSVVASPAYWDRFCSFIDEYISLGFAN--SAKSASYPGVV 729
K++W H+ LFA++C DD +VT +WV++ E+ + FPFTLWPLTYRT V S ++ SP + + C VK+Y+ NEV+++CFQ + D+ PC T + H HS + PL+ C + + + R+ F ++++N I +V+C G+ +A +AS+++ ++ E +F+ D RV VD V FS V + YW +F +D I + +AK + P VV
Sbjct: 27 KHSWYHLKLFAQICDCDDDAQNVTENWVKMLENQHEMVFPFTLWPLTYRTSTVILSSSLSSPKVKRYTVDPHQCEITVKLYRSNEVVVICFQHRQQDAKVSCPCNEWCKFQTTTDNHHGQHSNDNSIPLVKCQPLSIFALIRQRVMAEFSKMDQNEISAVICTGYDKGGMLATFMASELASDFKMEAEFMEYDHPRVSVDCVSFSLPEVGNDTYWKKFNGLVDNQIHVRHHTDKAAKKSPKPSVV 271
BLAST of mRNA_P-littoralis_Contig15.77.1 vs. uniprot
Match: B5LWD6_9PHYC (Putative lipase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWD6_9PHYC) HSP 1 Score: 139 bits (349), Expect = 1.980e-35 Identity = 78/241 (32.37%), Postives = 129/241 (53.53%), Query Frame = 1
Query: 7 HKYTWNHILLFAKVCGQVDDGDSVTASWVRVTEDHNMQTFPFTLWPLTYRTCEVTTSPAMCSPIHLSSEELG---CNYDVKIYKCNEVMIVCFQD----KPSDSVCQHPCIVDLDDATADETHVD-----HHSCSKTEPLLPCHVVHCYHQMETRIKDAFYQL-----EKNIESVVCIGHGASATMAVCLASDMSRTYETEKDFLGLDARRVVVDVVGFSDSVVASPAYWDRFCSFIDEYI 678
+ +TWNH+ LFA++C DD +VT +W+R+ E + FPFTLWPLTYRT V S ++ +P + S +L C VK YK NEV+++CFQ D C C +L E H HS ++PL+ C + + Q++ R+ F + ++++ V+C+G+ A +A +A++++ ++ E +F+G +A +V VD + FS + + YW F S +D I
Sbjct: 4 YTHTWNHLKLFAQMCDCNDDKHTVTDNWIRMLEKQHESVFPFTLWPLTYRTSAVILSTSLSTP-KVKSYDLKPEQCKVIVKFYKSNEVVMICFQHISEGSSMDCSCTEWC--ELHAGIVPEEHDSPCSHGQHSTDSSQPLVKCGHLTMFSQVKKRVMSEFAKFNSQENDRDVSVVICMGYDKGAVLATFMAAELASDFKLEAEFMGFEAPKVTVDCISFSIPELGNEVYWKDFDSIVDRKI 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.77.1 >prot_P-littoralis_Contig15.77.1 ID=prot_P-littoralis_Contig15.77.1|Name=mRNA_P-littoralis_Contig15.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=302bp MKHKYTWNHILLFAKVCGQVDDGDSVTASWVRVTEDHNMQTFPFTLWPLTback to top mRNA from alignment at P-littoralis_Contig15:186549..187454- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.77.1 ID=mRNA_P-littoralis_Contig15.77.1|Name=mRNA_P-littoralis_Contig15.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=906bp|location=Sequence derived from alignment at P-littoralis_Contig15:186549..187454- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:186549..187454- >mRNA_P-littoralis_Contig15.77.1 ID=mRNA_P-littoralis_Contig15.77.1|Name=mRNA_P-littoralis_Contig15.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=906bp|location=Sequence derived from alignment at P-littoralis_Contig15:186549..187454- (Pylaiella littoralis U1_48)back to top |