prot_P-littoralis_Contig15.74.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.74.1
Unique Nameprot_P-littoralis_Contig15.74.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length406
Homology
BLAST of mRNA_P-littoralis_Contig15.74.1 vs. uniprot
Match: Q9J3U3_ESV1K (EsV-1-58 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q9J3U3_ESV1K)

HSP 1 Score: 414 bits (1065), Expect = 9.880e-139
Identity = 217/362 (59.94%), Postives = 265/362 (73.20%), Query Frame = 0
Query:    1 MMAGLLPAALKITEHKQMNDIAERYYAKYIEDFNNKYGFKKEEVQELVKEFEEVTEEICKLIPDEEMRNMYRKYILSYPTMFLSMIPAEALQTKLAVKCVNDNKGLREKVEDMSKCVSSLVKNLTELQIKAGIPPIVNLMFESMPDPLTAMTDPMYHKYNAAIMTYHKLLADNTKTT------DPDDPSETITVGDLLRTQPLTCVNELLRTKTGG-----YDIRSRNG----EWEK----VTRQDLEDLGRVMQNMKTQSGCQPFGDEWNHTGPTPPMNPAMCLADGENIQPGNPRHDTGRTNLYRARREKNGQAHWTHVGNVPALAADGN-QMVQHEPPPVQNAGMWDGAGYTPGVDNRP 342
            MMAG+LPAALKI EHK M  +AERYY KYI+DFN KYGF + +++ELV+EF EVT+EI +LIPD +M+ MY KYI SYPTM+LSMIPAEALQTKLAVKCV+DNK LR K+E MS  VSSLV+NLT+LQI AGIPPIVNLMFESMPDPLTAMTDPMY KYN AI+TYHKLL D    T      DP  P+      + LR +P+  +++L    + G     + I++  G    + +K    VT  +++DL  V++NM+TQSGCQPFG+EWNHTGPTPPMNPAMCL     +QPGNPRH+ GRTNLY A+R+ NG A+W   G VPA++  G  QMVQH+P P+Q    W G  +TPGVD RP
Sbjct:   64 MMAGILPAALKIQEHKDMQQVAERYYEKYIKDFNRKYGFSEPQIKELVEEFNEVTDEIKRLIPDAKMKEMYAKYIESYPTMYLSMIPAEALQTKLAVKCVSDNKALRTKIETMSSAVSSLVRNLTDLQISAGIPPIVNLMFESMPDPLTAMTDPMYQKYNDAIVTYHKLLQDEQPHTFAFARIDPASPAPASNT-EFLRLEPVQYLDKLAEHMSSGAGAGPHAIKNSAGTPVQDADKKDLVVTPDEVQDLATVLKNMQTQSGCQPFGEEWNHTGPTPPMNPAMCLDHENRLQPGNPRHNVGRTNLYMAKRDPNGNAYWVQTGQVPAVSNGGGPQMVQHQPQPMQQPDPWAGQRHTPGVDPRP 424          
BLAST of mRNA_P-littoralis_Contig15.74.1 vs. uniprot
Match: D8LP91_ECTSI (EsV-1-58 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP91_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 1.560e-138
Identity = 218/365 (59.73%), Postives = 262/365 (71.78%), Query Frame = 0
Query:    1 MMAGLLPAALKITEHKQMNDIAERYYAKYIEDFNNKYGFKKEEVQELVKEFEEVTEEICKLIPDEEMRNMYRKYILSYPTMFLSMIPAEALQTKLAVKCVNDNKGLREKVEDMSKCVSSLVKNLTELQIKAGIPPIVNLMFESMPDPLTAMTDPMYHKYNAAIMTYHKLLADNTKTTDPD---DPSETITVG----DLLRTQPLTCVNELLR------TKTGGYDI--RSRNGEWE-------KVTRQDLEDLGRVMQNMKTQSGCQPFGDEWNHTGPTPPMNPAMCLADGENIQPGNPRHDTGRTNLYRARREKNGQAHWTHVGNVPALAADGN-QMVQHEPPPVQNAGMWDGAGYTPGVDNRP 342
            MMAG+LPAALKI EHK M  +AERYY KYI+DFN KYGF  E++  LV+EF +VT EI +LIPD++MR MY KYI SYPTM+LSMIPAEALQTKLAVKCV+DNK LREK+E MS  VSSLV+NLT+LQI AGIPPIVNLMFESMPDPLTAMTDPMY KYN AI+TYHKLL D    T+     D +  I  G    + LR +P+  + +L        T  G Y I   +R+   +       +V+ ++++DL  V++NM+TQSGCQPFG+EWNHTGPTPPMNPAMCL +    QPGNPRH+ GRTNLY A+R+ NG A W   G VPAL+  G  QMVQH+P P+Q    W G  + PGVD RP
Sbjct:    3 MMAGILPAALKIQEHKDMQKVAERYYEKYIKDFNRKYGFSPEQINALVEEFNDVTNEIKRLIPDDKMREMYAKYIESYPTMYLSMIPAEALQTKLAVKCVSDNKALREKIESMSSAVSSLVRNLTDLQISAGIPPIVNLMFESMPDPLTAMTDPMYQKYNDAIVTYHKLLQDEQPHTNGFARVDTNAAIPAGWSNTEFLRQEPVNYLEKLADHISTTGTAPGSYAILDNARSPVMKSDGITPLEVSPEEVKDLATVLKNMQTQSGCQPFGEEWNHTGPTPPMNPAMCLGNEHKFQPGNPRHNVGRTNLYMAKRDPNGNAQWVQTGQVPALSNGGGPQMVQHQPQPMQQPDPWAGQNHMPGVDPRP 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.74.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q9J3U3_ESV1K9.880e-13959.94EsV-1-58 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP91_ECTSI1.560e-13859.73EsV-1-58 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..352
IPR008160Collagen triple helix repeatPFAMPF01391Collagencoord: 366..402
e-value: 2.1E-6
score: 27.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:181520..182938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.74.1mRNA_P-littoralis_Contig15.74.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 181520..182944 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.74.1 ID=prot_P-littoralis_Contig15.74.1|Name=mRNA_P-littoralis_Contig15.74.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=406bp
MMAGLLPAALKITEHKQMNDIAERYYAKYIEDFNNKYGFKKEEVQELVKE
FEEVTEEICKLIPDEEMRNMYRKYILSYPTMFLSMIPAEALQTKLAVKCV
NDNKGLREKVEDMSKCVSSLVKNLTELQIKAGIPPIVNLMFESMPDPLTA
MTDPMYHKYNAAIMTYHKLLADNTKTTDPDDPSETITVGDLLRTQPLTCV
NELLRTKTGGYDIRSRNGEWEKVTRQDLEDLGRVMQNMKTQSGCQPFGDE
WNHTGPTPPMNPAMCLADGENIQPGNPRHDTGRTNLYRARREKNGQAHWT
HVGNVPALAADGNQMVQHEPPPVQNAGMWDGAGYTPGVDNRPPPPPPPQQ
MQMQTQRAPTQQQMQGSKGSKGSKGSKGSKGSKGSKGSKGSKGSKGSKGS
KGSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008160Collagen