mRNA_P-littoralis_Contig15.70.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.70.1
Unique NamemRNA_P-littoralis_Contig15.70.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: Q8QNK7_ESV1K (EsV-1-64 n=2 Tax=root TaxID=1 RepID=Q8QNK7_ESV1K)

HSP 1 Score: 330 bits (845), Expect = 4.620e-113
Identity = 161/201 (80.10%), Postives = 180/201 (89.55%), Query Frame = 1
Query:    1 MHPSIRRIVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVFAEKVGIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTASGINVEIKTVFKNAFVKVSKMYYDQVQLQMEVADLDKTHLVQHYITMPDQPIVVHEIPRDREWFATNSPIFKEFVRKLGEFFPFADADEF 603
            MH SI+RI++YP+IAQR+PEWY+YRKKRVTASEASTIIAQGKGYDR+F +KVGIRD+ +SSEYM IGTDNEEAVV LYREK+PEEEVFHDLSIIPH +LD+VAASLDACTASGINVEIKTVFK   +KVSKMYYDQVQLQMEV+DL+KTHLVQHYI MP+QPIVVHEI RDR WF  N  IFK FV K+ +FFPF  ADEF
Sbjct:    1 MHSSIKRILDYPRIAQRTPEWYEYRKKRVTASEASTIIAQGKGYDRIFEQKVGIRDSNISSEYMTIGTDNEEAVVALYREKFPEEEVFHDLSIIPHPTLDFVAASLDACTASGINVEIKTVFKEKVIKVSKMYYDQVQLQMEVSDLEKTHLVQHYIRMPNQPIVVHEIFRDRGWFERNRGIFKGFVEKVRDFFPFVHADEF 201          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: B5LWE1_9PHYC (Putative exonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE1_9PHYC)

HSP 1 Score: 195 bits (496), Expect = 6.490e-60
Identity = 103/190 (54.21%), Postives = 129/190 (67.89%), Query Frame = 1
Query:    4 HPSIRRIVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVF-AEKVGIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTASGINVEIKTVFK-NAFVKVSKMYYDQVQLQMEVADLDKTHLVQHYITMPDQPIVVHEIPRDREWFATNSPIFKEFVRKL 567
            HPS+  I+  P+I QR+PEW+ +R+  VTASE ST+IAQGKG   +   +K     +  S+E+   G+ NE  VV  YRE +P   V HDLSI  H  LD+VAASLDACT +GINVEIKT FK      + K Y DQVQLQMEVADLD THLV  YI +P QP+VVH+IPRDR+WF  +  I ++FV +L
Sbjct:    5 HPSVLSILSGPRIEQRTPEWFAFRRSHVTASEVSTVIAQGKGARSLLHRKKFQAVSSNFSTEFTDRGSANEGTVVEKYRELFPGVVVHHDLSITRHRDLDFVAASLDACTNTGINVEIKTSFKPRPVTTIPKSYRDQVQLQMEVADLDLTHLVYQYINIPGQPVVVHQIPRDRDWFQKHVAILRDFVHEL 194          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: Q6XLZ3_9PHYC (FirrV-1-B43 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLZ3_9PHYC)

HSP 1 Score: 189 bits (479), Expect = 8.250e-57
Identity = 97/191 (50.79%), Postives = 129/191 (67.54%), Query Frame = 1
Query:    4 HPSIRRIVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVFAEKV--GIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTASGINVEIKTVFKNAFV-KVSKMYYDQVQLQMEVADLDKTHLVQHYITMPDQPIVVHEIPRDREWFATNSPIFKEFVRKL 567
            HPS+  I+  P+I QRSPEW+ +RK  VTASEAS +IAQGKG   +   K    +  +  S+E+ +IG +NE  +V  YR  YP+  V   L II H   D++AASLDACT +GINVE+KT FK   +  + K YYDQVQLQMEVA+LD THLV  YI +PDQP++VHE+ R+ +WF+ +   F+ FV +L
Sbjct:    6 HPSVLLILASPQIIQRSPEWFAFRKAHVTASEASIVIAQGKGLRTLMNRKKYQAVNGSSFSNEFTKIGAENESKIVEKYRLMYPDVIVHDQLPIIKHQRFDFLAASLDACTNTGINVEMKTSFKTTRIHSIPKAYYDQVQLQMEVANLDMTHLVYQYINLPDQPVIVHEVHRNTDWFSEHLHKFRIFVEEL 196          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: A0A6G6XQ18_9VIRU (YqaJ domain-containing protein n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XQ18_9VIRU)

HSP 1 Score: 70.1 bits (170), Expect = 1.090e-10
Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = 1
Query:   22 IVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVFAEKVGIRDNR--------VSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTASGINVEIKTVFKNAFVKVSKMYYDQVQLQME 426
            ++E P++ QRSPEW+D RK R+TAS+ +  + +GK     F  + G+   +        VSS  M+ GT  E   +R YR++  +    H+  ++PH ++D+  AS D  +  GI +E K   K    K+     +Q ++QM+
Sbjct:   71 LMEMPQVEQRSPEWHDMRKNRLTASDTAAAMGRGK-----FETRKGLLKKKAFPELSPFVSSPIMKWGTMFEPIALRSYRQRNGD-ITCHEFGLVPHPTVDHYGASPDGISELGIMLEFKCPPKR---KIDGTIPEQYEIQMQ 204          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: A0A6C0KJE2_9ZZZZ (YqaJ domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KJE2_9ZZZZ)

HSP 1 Score: 69.7 bits (169), Expect = 1.630e-10
Identity = 50/159 (31.45%), Postives = 76/159 (47.80%), Query Frame = 1
Query:   13 IRRIVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVFAEKV-----GIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTASGIN----VEIKTVFKNAFVKVSKM-YYDQVQLQMEVADLDKTHLVQ 459
            I+ +   P+ AQ++ EWY +RK  +T S     ++     +++  EK+     G + N +S   +  G   E      Y  +Y  + V  +   IPH ++ ++AAS D    S  N    VEIK V      K+ KM YY Q+QLQMEV DL     V+
Sbjct:  106 IQYLKSVPQPAQKTEEWYSFRKNHLTGSNIWKTLSSQSCINQLIYEKLAPSVSGTKRNSLSESPLNWGHKYEPLTCLFY--EYYNDVVVEEFGCIPHKTIPFLAASPDGIVTSPKNNGRMVEIKNVVSREITKIPKMEYYIQMQLQMEVCDLPDCDFVE 262          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: A0A6C0J270_9ZZZZ (YqaJ domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0J270_9ZZZZ)

HSP 1 Score: 63.5 bits (153), Expect = 2.120e-8
Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = 1
Query:   46 QRSPEWYDYRKKRVTASEASTIIA--QGKGYDRVFAEKV--GIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTASGINVEIKTVFKNAFV-KVSKMYYDQVQLQMEVADLDKTHLVQ-HYITMPDQPIVVHEIPRDR 516
            Q+S EW + R + +TAS  + I    + K    +  EK   G     + + Y   G   E     +Y   Y    + HD  +I H    ++ AS D  T   IN+EIK          +S++YY+Q+QLQMEV +LD TH  + ++IT   +  +V +   ++
Sbjct:  131 QKSKEWLNARYECITASVVAKITNNYKSKTLQSMIMEKAHYGKYSKNIKNVYTTYGELYEPLANMVY--SYRTNTITHDFGLIKHPIYSFIGASTDGVTDGLINIEIKCPTSRIVDGHISRLYYEQMQLQMEVLNLDITHFFECNFITHTYEEFIVLDTTNEK 291          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: A0A519CLZ1_9EURY (YqaJ domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A519CLZ1_9EURY)

HSP 1 Score: 59.3 bits (142), Expect = 6.530e-7
Identity = 48/170 (28.24%), Postives = 70/170 (41.18%), Query Frame = 1
Query:   22 IVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVFAEKVGIRDNRVSSEYMQIGTDN--------EEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTAS------GINVEIKTVFKNAFVKV-SKMYYDQVQLQMEVADL-DKTHLVQHYITMPDQ 483
            I   P+  QR+PEW+++R   +TAS A  I       +++  EK     +R +   M + T +        E   +  Y  KY  +    D   I H    ++ AS D           G  +EIK V       +  KMY+ Q+QLQME  DL D       +   PDQ
Sbjct:  102 IKNKPQPEQRTPEWFEFRHNLITASSAGKIFESLSSINQIIYEKCSPMVDRSNMSNMPVNTSSPLHWGQKYEPVSILFYEHKYNTK--VEDFGCIQHDKYKFLGASPDGIITDKNSNLHGRMLEIKNVVSRVITGIPKKMYWIQMQLQMETCDLNDXXXXXXXFKEYPDQ 269          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: H8YW21_9GAMM (Putative phage-type endonuclease n=2 Tax=Thiorhodovibrio TaxID=61593 RepID=H8YW21_9GAMM)

HSP 1 Score: 58.9 bits (141), Expect = 7.450e-7
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1
Query:   40 IAQRSPEWYDYRKKRVTASEASTIIAQG--KGYDRVFAEKVGIRDNRVSSE--YMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIP----HGSLDYVAASLDACTASGINVEIKTVFKNAFVKVS---------KMYYDQVQLQMEVADLDKTHLVQHYITMPDQPIVVHEIPRD 513
            +AQR+PEW+ +R + +TASE++ I+ +   K   R++AE+ G+      S+   +Q G   E+A  + + ++Y       D  ++P          + AS D  T +G  VE+K   +  F  V+         ++Y  QVQ Q+ VA  DK +LV +     D   +V EI RD
Sbjct:    6 LAQRTPEWHQWRAQGITASESAIILGRSPYKTPWRLWAERTGLAKTADLSKNPLVQRGNRLEDAARQWFEQRY-------DTLVLPVCGESEEEPLLRASFDGITDAGEPVELKVPSERTFRDVTNHGRAAGAFRLYEPQVQHQLYVAGADKGYLVFY---QEDNDPIVFEITRD 170          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: H8YVI8_9GAMM (Putative phage-type endonuclease n=1 Tax=Thiorhodovibrio sp. 970 TaxID=631362 RepID=H8YVI8_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 1.000e-6
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1
Query:   40 IAQRSPEWYDYRKKRVTASEASTIIAQG--KGYDRVFAEKVGIRDNRVSSE--YMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIP----HGSLDYVAASLDACTASGINVEIKTVFKNAFVKVS---------KMYYDQVQLQMEVADLDKTHLVQHYITMPDQPIVVHEIPRD 513
            +AQR+PEW+ +R + +TASE++ I+ +   K   R++AE+ G+      S+   +Q G   E+A  + + ++Y       D  ++P          + AS D  T +G  VE+K   +     V+         ++Y  QVQ Q+ VA  DK +LV +     DQ  +V EI RD
Sbjct:    6 LAQRTPEWHQWRAQGITASESAIILGRSPYKTPWRLWAERTGLAKTADLSKNPLVQRGNRLEDAARQWFEQRY-------DTLVLPVCGESEEEPLLRASFDGLTDAGEPVELKVPSERTLRDVAEHGRAASAFRLYEPQVQHQLYVAGADKGYLVFY---QEDQEPIVFEIARD 170          
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Match: A0A5B8IJD0_9VIRU (YqaJ domain-containing protein (Fragment) n=1 Tax=Mimiviridae sp. ChoanoV1 TaxID=2596887 RepID=A0A5B8IJD0_9VIRU)

HSP 1 Score: 58.2 bits (139), Expect = 1.070e-6
Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 1
Query:   13 IRRIVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQG--KGYDRVFAEKVGIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLDYVAASLDACTAS--------GINVEIKTVFKNAFVK-VSKMYYDQVQLQMEVADLDKTHLVQ 459
            I+ + + P+  QR+PEWY +RK R+TAS+  TII     +  D +  +K G       ++ ++ G   EE + ++Y  K    +VF +   IPH  + +  AS D    S        G  +EIK          + + Y+ QVQ Q+EV DL     V+
Sbjct:  120 IKELKKIPQPEQRTPEWYTFRKNRLTASDLGTIIGVNPYEKPDYIVQKKCGFERPFRVNKAIKWGVKYEEVITQIYEHKN-NVKVF-EYGCIPHPVIKHFGASPDGIVDSDSINQDYVGRMLEIKCPSSRDITGFIPEYYHAQVQGQLEVCDLQYCDFVE 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
Q8QNK7_ESV1K4.620e-11380.10EsV-1-64 n=2 Tax=root TaxID=1 RepID=Q8QNK7_ESV1K[more]
B5LWE1_9PHYC6.490e-6054.21Putative exonuclease n=1 Tax=Feldmannia species vi... [more]
Q6XLZ3_9PHYC8.250e-5750.79FirrV-1-B43 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A6G6XQ18_9VIRU1.090e-1031.47YqaJ domain-containing protein n=1 Tax=Dishui Lake... [more]
A0A6C0KJE2_9ZZZZ1.630e-1031.45YqaJ domain-containing protein n=1 Tax=viral metag... [more]
A0A6C0J270_9ZZZZ2.120e-829.45YqaJ domain-containing protein n=1 Tax=viral metag... [more]
A0A519CLZ1_9EURY6.530e-728.24YqaJ domain-containing protein n=1 Tax=Euryarchaeo... [more]
H8YW21_9GAMM7.450e-729.71Putative phage-type endonuclease n=2 Tax=Thiorhodo... [more]
H8YVI8_9GAMM1.000e-629.71Putative phage-type endonuclease n=1 Tax=Thiorhodo... [more]
A0A5B8IJD0_9VIRU1.070e-630.00YqaJ domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:176589..177191 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog10506.Q84486_PBCV1
Model size603
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360
Exons1
Evalue2.46e-12
EggNOG OGs4QCB0@10239|Viruses,4QX81@35237|dsDNA viruses no RNA stage
Ec32 ortholog descriptionEsV-1-64 nuclease
Ec32 orthologEc-06_006150.1
Descriptioninduction by virus of catabolism of host mRNA
Cds size603
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789711.5461974-CDS-P-littoralis_Contig15:176588..1771911680789711.5461974-CDS-P-littoralis_Contig15:176588..177191Pylaiella littoralis U1_48CDSP-littoralis_Contig15 176589..177191 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.70.1prot_P-littoralis_Contig15.70.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 176589..177191 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.70.1

>prot_P-littoralis_Contig15.70.1 ID=prot_P-littoralis_Contig15.70.1|Name=mRNA_P-littoralis_Contig15.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp
MHPSIRRIVEYPKIAQRSPEWYDYRKKRVTASEASTIIAQGKGYDRVFAE
KVGIRDNRVSSEYMQIGTDNEEAVVRLYREKYPEEEVFHDLSIIPHGSLD
YVAASLDACTASGINVEIKTVFKNAFVKVSKMYYDQVQLQMEVADLDKTH
LVQHYITMPDQPIVVHEIPRDREWFATNSPIFKEFVRKLGEFFPFADADE
F
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mRNA from alignment at P-littoralis_Contig15:176589..177191-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.70.1 ID=mRNA_P-littoralis_Contig15.70.1|Name=mRNA_P-littoralis_Contig15.70.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=603bp|location=Sequence derived from alignment at P-littoralis_Contig15:176589..177191- (Pylaiella littoralis U1_48)
ATGCATCCGAGTATCAGAAGGATAGTGGAGTACCCAAAGATTGCTCAGAG ATCACCCGAATGGTACGATTATCGCAAGAAACGGGTGACTGCGTCAGAAG CGTCCACGATCATCGCACAGGGCAAGGGGTACGACCGCGTGTTTGCAGAG AAGGTCGGTATCCGCGACAACCGCGTCAGCAGCGAGTACATGCAGATCGG GACCGACAACGAGGAAGCCGTCGTCAGGCTCTATCGTGAAAAGTATCCGG AAGAAGAAGTGTTTCACGATCTTTCCATCATTCCGCACGGCAGCCTAGAC TACGTCGCCGCTTCTCTCGATGCCTGCACGGCGAGCGGGATTAATGTTGA GATAAAGACCGTTTTCAAGAACGCTTTCGTGAAAGTTTCAAAAATGTACT ACGACCAAGTTCAGCTGCAGATGGAAGTTGCCGACCTGGATAAGACGCAT TTAGTTCAGCACTACATCACGATGCCGGACCAACCGATCGTCGTGCACGA GATCCCAAGAGATCGCGAGTGGTTCGCAACGAATTCACCGATATTCAAGG AGTTCGTCAGGAAACTCGGCGAGTTCTTTCCTTTCGCCGACGCCGACGAG TTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:176589..177191-

>mRNA_P-littoralis_Contig15.70.1 ID=mRNA_P-littoralis_Contig15.70.1|Name=mRNA_P-littoralis_Contig15.70.1|organism=Pylaiella littoralis U1_48|type=CDS|length=603bp|location=Sequence derived from alignment at P-littoralis_Contig15:176589..177191- (Pylaiella littoralis U1_48)
ATGCATCCGAGTATCAGAAGGATAGTGGAGTACCCAAAGATTGCTCAGAG
ATCACCCGAATGGTACGATTATCGCAAGAAACGGGTGACTGCGTCAGAAG
CGTCCACGATCATCGCACAGGGCAAGGGGTACGACCGCGTGTTTGCAGAG
AAGGTCGGTATCCGCGACAACCGCGTCAGCAGCGAGTACATGCAGATCGG
GACCGACAACGAGGAAGCCGTCGTCAGGCTCTATCGTGAAAAGTATCCGG
AAGAAGAAGTGTTTCACGATCTTTCCATCATTCCGCACGGCAGCCTAGAC
TACGTCGCCGCTTCTCTCGATGCCTGCACGGCGAGCGGGATTAATGTTGA
GATAAAGACCGTTTTCAAGAACGCTTTCGTGAAAGTTTCAAAAATGTACT
ACGACCAAGTTCAGCTGCAGATGGAAGTTGCCGACCTGGATAAGACGCAT
TTAGTTCAGCACTACATCACGATGCCGGACCAACCGATCGTCGTGCACGA
GATCCCAAGAGATCGCGAGTGGTTCGCAACGAATTCACCGATATTCAAGG
AGTTCGTCAGGAAACTCGGCGAGTTCTTTCCTTTCGCCGACGCCGACGAG
TTT
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