mRNA_P-littoralis_Contig15.56.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.56.1
Unique NamemRNA_P-littoralis_Contig15.56.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: Q8QKY1_ESV1K (EsV-1-88 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKY1_ESV1K)

HSP 1 Score: 448 bits (1153), Expect = 2.760e-152
Identity = 222/426 (52.11%), Postives = 308/426 (72.30%), Query Frame = 1
Query:    4 VRTQFVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPYVIRFSVKNGGGQLRDADLEEIFTPFQNLSKQGVKGSGVGLGLARCKRMAQELGGELSVENGAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSATQPSVLVVDDSAVARLQLKKMLTHVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQLCAGIADSVILEKPVQRSVLLRTITSSMKSPSALEWIRQAWY-KEDESFSERSSRQPTM 1278
            V+TQF+RN+A+RIDTDM+ RL RSS + +E+SD +T+P  V  +FDVGEEYG M++N+L YY SVN  F  V+GP+L+RN+V+DA  DAK  M  V+   P++++ + HDVP+SE+IGDGPVIKECL+EL+FN LRHD++ HVSV + A S  P  + F V+N G +++D DL  IFTPF ++ +  V G G+G+GLA+CKRMA ELGG+L V+NG   TFSL  P+ H+K++ LQ +G + +++ RG    R +     E  IF   +I ++AT+P +LVVDDSA+AR Q +KM+ HVDI VD C+G L+CL+  + + YDLICLDIIM  M+G+TCA HLR GDT N   P+V+ITADS+  TR+LCA I++S++LEKP +R+VL RTI SSM+     EWIR+AW+ K  E    ++ R  T+
Sbjct:   36 VKTQFLRNMAYRIDTDMIHRLTRSSIKFKEISDKSTVPDFVGTIFDVGEEYGIMLKNVLAYYDSVNDKFKVVEGPMLIRNIVADAKTDAKHQMLLVSKKPPLINIDLRHDVPISEMIGDGPVIKECLQELMFNGLRHDNNNHVSVHIMAMSHSPCHVTFEVENHGIRIQDKDLANIFTPFNSIHRGVVHGCGLGIGLAKCKRMAYELGGDLLVQNGEATTFSLVIPIKHEKELRLQHDG-MALTFRRGSSVYRVEEDIAEESTIFQENEISNTATRPCILVVDDSAIARRQFEKMMMHVDIEVDLCNGALECLEKVKTKDYDLICLDIIMPVMSGVTCAYHLREGDTCNKACPLVIITADSSTETRELCASISESMVLEKPAKRNVLYRTIMSSMRDSQKKEWIRRAWHTKYAEQQKNKNKRDDTL 460          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: D8LPB9_ECTSI (Histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPB9_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 8.140e-152
Identity = 225/426 (52.82%), Postives = 305/426 (71.60%), Query Frame = 1
Query:    4 VRTQFVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPYVIRFSVKNGGGQLRDADLEEIFTPFQNLSKQGVKGSGVGLGLARCKRMAQELGGELSVENGAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSATQPSVLVVDDSAVARLQLKKMLTHVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQLCAGIADSVILEKPVQRSVLLRTITSSMKSPSALEWIRQAWY-KEDESFSERSSRQPTM 1278
            V+TQF+RN+A+RIDTDM++RL RSS + +E+SD +TIP  V  VFDVGEEYGAM+ N+L YY SVN  F  V+GP+L+RN+V+DA  DA   M RV+   P++D+ + HDVP+SE+IGDGPVIKECL+EL+FN LRHD +  VSV V A S  P  + FSV+N G +++D D+  IFTPF ++ +  V G G+G+GLA+CKRMA ELGG+L V+NG   TFSL  P+ H+K++ LQ +G + +++ R       +A    E  IF   +I H+AT+P +LVVDDSAVAR Q +KM+ HVDI VD CDG + CL+  + + YDLICLDIIM  M+G+TCA  LR GDT N   P+V+ITADS+  TRQLCA I++S++LEKP +R+VL RTI SS++     EWIR+ W+ K  E  ++   R+ T+
Sbjct:   37 VKTQFLRNMAYRIDTDMIRRLTRSSGKFKEISDKSTIPDFVATVFDVGEEYGAMLTNVLAYYDSVNEKFKIVEGPMLIRNIVADAKTDAVHQMLRVSNAPPLIDIDLRHDVPISEMIGDGPVIKECLQELIFNGLRHDSNNQVSVHVKAMSHSPCQVTFSVQNKGIRIQDEDVAGIFTPFNSIHRGVVHGCGLGIGLAKCKRMAYELGGDLVVQNGETTTFSLVIPIKHEKEIRLQHDG-MALTFRRRSSYYGVEADVAEESCIFQEGEISHTATRPCILVVDDSAVARRQFEKMMKHVDIEVDLCDGAMACLEEVKTKDYDLICLDIIMPVMSGVTCAYQLREGDTRNKECPLVIITADSSTETRQLCASISESMVLEKPAKRNVLYRTIMSSIRDSQKREWIRRTWHTKNAEQRTQTHIREATL 461          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: UPI001BC67B00 (response regulator n=1 Tax=unclassified Jannaschia TaxID=2645469 RepID=UPI001BC67B00)

HSP 1 Score: 104 bits (259), Expect = 2.970e-20
Identity = 87/301 (28.90%), Postives = 138/301 (45.85%), Query Frame = 1
Query:  310 VDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPYVIRFSVKNGGGQLRDADLEEIFTPFQNLSK-QGVKGSGVGLGLARCKRMAQELGGELSVENGAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSATQPSVLVVDDSAVARLQLKKMLTHVDITV-DCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQLCAGIADSVILEKPVQRSVLLRTITSSMKSPSAL 1206
            +DV +  DV     +GD   I++ L  L  NA++  D+  V +    A  DP V+  SV + G  +  AD E IF  F +L++ QG +  G GLGLA  +R+A+++GG+L+V +  ++  S T  LA D+                               ++ TP +         VL+V+D+ + R  L+ MLT++   V + CDG L  LD      YDLI +DI M G  G++    +R+GD  N ++ IV +TA                    KP++ S L   +    ++P  L
Sbjct:  449 IDVDIAPDVD-GWFMGDAARIRQILVNLGGNAVKFTDEGAVILQATLAPNDPTVLAISVHDTGSGIAPADQERIFDDFVSLAQAQGRQTRGDGLGLAIARRLARQMGGDLTVASTLDLGTSFTLSLALDRAQTAPLVSRTSP-------------------EMDTPTR--------DVLLVEDNEINRTILRAMLTNLGHRVTEACDG-LDALDRLAAAPYDLILMDINMPGPNGLSVIRQVRQGDGPNAQSRIVALTAHGQEEFSAKATAAGADGFETKPIRLSTLATLLADIGEAPMPL 720          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: A0A3D0X5V4_9FIRM (Histidine kinase n=1 Tax=Selenomonas sp. TaxID=2053611 RepID=A0A3D0X5V4_9FIRM)

HSP 1 Score: 103 bits (258), Expect = 4.500e-20
Identity = 102/403 (25.31%), Postives = 192/403 (47.64%), Query Frame = 1
Query:    7 RTQFVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPYVIRF--SVKNGGGQLRDADLEEIFTPFQNLSKQ---GVKGSGVGLGLARCKRMAQELGGELSVEN--GAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHS---ATQPSVLVVDDSAVARLQLKKMLTHVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNN-RTPIVLITADSTAATRQ--LCAGIADSVILEKPVQRSVLLRTI 1176
            ++QF+ N++H I T +   L      LRE S+   I      +   G    +++ +IL + +  +G    +     + +V++D +       +R        +V V HD+P S L GD   I++ +  ++ NA+++ +   V++ V    +D   I     VK+ G  +++ DL ++F  F+ + ++    V+G+G+G+ +++  ++   +G +L V++  G   TFS    +   K +  +Q G  E SY            RH      T  + Y     A +  +LVVDD+++    +K +L    I +D  +   +CL+M RR+ YD+I LD  M G+ GI     ++  +   N  TP++ +TA++ +  R+  + AG  D   L KP+  + L  TI
Sbjct:  459 KSQFLSNMSHEIRTPINAILGMDEMILRE-SNNPAILEYAENIRMAGNNLLSLINDILDFSKIESGKMDIIPVEYAISSVLNDLV---NMIQNRAHKKGIKFEVKVAHDIP-SILFGDEIRIRQIITNILTNAVKYTEKGSVTLIVDYTPKDANTILLWVGVKDTGIGIKEDDLNKLFKAFERIEEKRNRAVEGTGLGMNISQ--QLLTLMGTKLDVQSTYGKGSTFSF---MLEQKVLNWEQMGNFEDSY------------RH----AVTHREKYQEKFIAPKACILVVDDTSMNLTVVKGLLKQTKIQIDTAESGYECLNMVRRKKYDIIFLDHRMPGIDGIETLHQMKVLEGNLNIDTPVISLTANAISGAREEYISAGFKD--YLTKPINSAQLELTI 833          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: A0A3D8JV52_9BURK (Histidine kinase n=2 Tax=Trinickia dinghuensis TaxID=2291023 RepID=A0A3D8JV52_9BURK)

HSP 1 Score: 103 bits (256), Expect = 7.150e-20
Identity = 91/348 (26.15%), Postives = 161/348 (46.26%), Query Frame = 1
Query:  163 MMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVD--VHAASQDPYVIRFSVKNGGGQLRDADLEEIFTPF-QNLSKQGVKGSGVGLGLARCKRMAQELGGELSVEN----GAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHS------ATQPSVLVVDDSAVARLQLKKML-----THVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNR-TPIVLITADSTAATRQLCAGIADSVILEKPV 1149
            ++ +IL Y +S NG       P+ +  +V  ++   + D+ R      +++V V  +V  +  +GD   + + L  L+ NA++  D   VSV   V A   +  V+  SV + G  +   +   +FTPF Q  S    +  G GLGLA CKR+ +++GG++++ +    G EV  +LT  +A D    L               ++R    +H + D+  P  +  +       + P +L+V+D ++ R  L++ L     T+ DI VD  +     L    R TY  +  D  M G++G+     +R+ + G+NR T ++ +TAD+T   R  C          KP+
Sbjct:  392 ILNDILDYAKSENGELSLESAPMSLEEIVRRSVAVVEPDIGR---KGLLLNVDVSKNVAPNH-VGDAQRLGQVLLNLLGNAVKFTDAGSVSVTAGVLADRAEEQVVSISVADTGIGIAPEEQAGLFTPFSQAQSLPASRYGGTGLGLAICKRLIEQMGGQITLRSDLGRGTEVKIALTLRMARD---AL---------------RARCTHEQHDQCDLRDPLDVPSTEAAAPATSAPRILLVEDQSINREVLRRQLAGLNVTNCDIAVDGAEA----LSAYERNTYAAVITDCTMPGLSGVELMSCIRQRERGSNRHTVLIAVTADATQRQRNACLDAGADEFCIKPL 713          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: A0A7U8C8F8_NEPCE (Histidine kinase n=1 Tax=Neptuniibacter caesariensis TaxID=207954 RepID=A0A7U8C8F8_NEPCE)

HSP 1 Score: 100 bits (249), Expect = 2.380e-19
Identity = 82/288 (28.47%), Postives = 133/288 (46.18%), Query Frame = 1
Query:  358 DGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPYVIRFSVKNGGGQLRDADLEEIFTPFQNLSKQGV--KGSGVGLGLARCKRMAQELGGELSV--ENGAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSAT-QPSVLVVDDSAVARLQLKKMLTHVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQLCAGIADSVILEKPVQRSVLLRTITSSMKSPSAL 1206
            DG  +++ L  L+ NA++  D   VSV V +  Q    + F VK+ G  +  ++  ++F+ F  +  Q       G GLGLA  +++   +GGE+    E G   +F  T PL              EI+                  +   PA   H+ + + +VLVVDDSA  RL  K ML +  + V C     + +D+      DLI +DI M GM+G+   ++L+   TG   TP++  TA +    +Q  +       LEKP+ ++VLL+T++  +   S L
Sbjct:   87 DGQRLRQVLLNLIGNAVKFTDYGRVSVLVTSTDQ---TLSFEVKDTGSGIPQSEQAKVFSEFATIDSQARLHPQEGTGLGLAISRKLITLMGGEIGFTSEEGVGTSFRFTLPL--------------EIA------------------EAQPPADTQHNLSLKGTVLVVDDSATNRLVAKTMLDNAGVDVICACSGEEAIDLYAGNKVDLILMDISMPGMSGVETFQYLK-SSTGWRETPVIAFTAYAQLEDKQRFSREGMQGHLEKPLDKTVLLQTVSPYLMPSSEL 338          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: H0SC37_BRAS3 (Histidine kinase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=H0SC37_BRAS3)

HSP 1 Score: 99.4 bits (246), Expect = 1.340e-18
Identity = 104/408 (25.49%), Postives = 172/408 (42.16%), Query Frame = 1
Query:   16 FVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVS---VGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPY--VIRFSVKNGGGQLRDADLEEIFTPFQNLSKQ-GVKGSGVGLGLARCKRMAQELGGELSVEN----GAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSATQPSVLVVDDSAVARLQLKKMLTHVDITVD-CCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQLC--AGIADSVILEKPVQRSVLLRTITSSMKSPS 1200
            FV  ++H I T M   L  +++ L    D     ++V A+ + G+    ++ +IL + +  +G        L + ++   A       +S + P     D+    V      S L+GD   I++ L  LV NA++      V V      +D     + +SV + G  +    +  +F  F         +  G GLGLA CKR+ +++GGE+ V +    G+  +FSLT P+A    +  Q +  I  S                       ++I        VLVVDD+   RL   KML   +I  D  CDG  + +  A R  YDLI +D+ M  M G      +R      +  PI+  TA++     + C  AG+ D V+  KP ++  L+  I   + +P+
Sbjct:  332 FVAMMSHEIRTPMNAVLGLATTLLETNLDPEQRRSVV-AIHNAGDNLLEILNDILDFSKLESGQ-------LSLEDIAFSAEALVHNTLSIIGPRASARDLKLRYVSDPAVPSALVGDAGRIRQILLNLVSNAVKFTSSGEVVVTTRCIEKDEKKATVEWSVTDTGIGIAADKIGSLFANFVQADNSISRRFGGSGLGLAICKRLTEQMGGEIRVSSTLGSGSTFSFSLTLPIAETVAMPEQNDDSIYASL---------------------QSRIAAFGRPLRVLVVDDNPTNRLVATKMLKDFEIQTDTACDGA-EAVTAASRFNYDLILMDVRMPEMDGFQATRTIRARGERRSNVPIIAFTANAFMEDIRACREAGMNDFVV--KPARKKALVEAILRVLPAPT 707          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: H0TGY0_9BRAD (Histidine kinase n=1 Tax=Bradyrhizobium sp. STM 3843 TaxID=551947 RepID=H0TGY0_9BRAD)

HSP 1 Score: 99.4 bits (246), Expect = 1.340e-18
Identity = 107/408 (26.23%), Postives = 177/408 (43.38%), Query Frame = 1
Query:   16 FVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGH----DVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPY--VIRFSVKNGGGQLRDADLEEIFTPF-QNLSKQGVKGSGVGLGLARCKRMAQELGGELSVEN----GAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSATQPSVLVVDDSAVARLQLKKMLTHVDITVD-CCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQLC--AGIADSVILEKPVQRSVLLRTITSSMKSP 1197
            FV  ++H I T M   L  +++ L    D     ++V A+ + G+    ++ +IL + +  +G     D       +V +A+       S + P     D+++      ++P + LIGD   I++ L  LV NA++      V V     ++D     I +SV + G  +    +  +F  F Q  +    +  G GLGLA CKR+ +++GGE++V +    G+  +F LT P+A       Q + GI  +                       ++I        VLVVDD+   RL   KML   DI  D  CDG  + +  A R  YDLI +D+ M  M G      +R      +  PI+  TA++     + C  AG+ D V+  KP ++  L+  I   +  P
Sbjct:  332 FVAMMSHEIRTPMNAVLGLATTLLETDLDPEQRRSVV-AIHNAGDSLLEILNDILDFSKLESGQLSLEDIGFSAEAMVHNAL-------SIIGPRAAAKDLTIRSVIDPELPPA-LIGDAGRIRQILLNLVSNAVKFTAAGEVIVTTSCVARDGQKATIEWSVSDTGIGIAPEKIRTLFANFVQADASINRRFGGSGLGLAICKRLTEQMGGEINVSSTLGRGSTFSFRLTLPIAETAAAPEQNDDGIFAAL---------------------QSRIAAFGRPLRVLVVDDNPTNRLVATKMLKEFDIQTDTACDGA-EAVTAANRFNYDLILMDVRMPEMDGFQATRTIRARGERRSEVPIIAFTANAFMEDIRACREAGMNDFVV--KPARKKALVEAILRVLPIP 706          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: A0A1H3WLV3_9FIRM (Stage 0 sporulation protein A homolog n=2 Tax=Pseudobutyrivibrio sp. ACV-2 TaxID=1520801 RepID=A0A1H3WLV3_9FIRM)

HSP 1 Score: 99.4 bits (246), Expect = 1.440e-18
Identity = 96/410 (23.41%), Postives = 183/410 (44.63%), Query Frame = 1
Query:    1 QVRTQFVRNVAHRIDTDMVQRLARSSSRLREMSD-------------TTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDV--HAASQDPYVIRFSVKNGGGQLRDADLEEIFTPFQNLSK---QGVKGSGVGLGLARCKRMAQELGGELSVENGAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYH---SATQPSVLVVDDSAVARLQLKKMLTHVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRT-PIVLITADSTAATRQLCAGIADSVILEKPVQRSVL 1164
            + ++ F+ N++H I T +   +  +   LRE  +             + ++ +L+  + D  +     ME IL  YQ   GS         + ++++     A+    R        D++V   +P   LIGD   IK+C+  L+ NA+++ +   +S+DV     +     ++FSV + G  +++ DL ++++PF+ + +   + ++G+G+G+ + R      +   E+  E G   TFS     A  + VV  +E G  I   +               D    A  YH   SA    +LVVDD+ +    +K +L   ++ +D     L+ L+  +  +YD+I LD  M  M GI   E ++  +   N+  P++ +TA++ +  ++       S  L KP+  S L
Sbjct:  389 EAKSSFLSNMSHEIRTPINAVIGMNEMILRESKEPQILVYANNAKSASNSLLSLINDILDFSKIEAGKMEIILAQYQM--GS--------TINDLINMVATRAEEKGLR-------FDINVDEHIPCL-LIGDELRIKQCVTNLLTNAVKYTEKGAISLDVSFEPINDRSIFLKFSVSDTGIGIKEEDLSKLYSPFERIEEIRNRTIEGTGLGMSIVRKLLALMDTKMEVKSEYGKGSTFSF----AIKQQVVSWEEIGNFIEKYK---------------DFINSANDYHRRFSAPDARILVVDDTEMNLTVVKSLLKQTNVQIDTAGSGLETLEKVKNNSYDVIFLDHRMPNMDGIETFEAMKVLEGNRNQNIPVIALTANAVSGAKEEYVAHGFSDYLSKPIDGSEL 761          
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Match: A0A222FBD5_9HYPH (Histidine kinase n=1 Tax=Labrenzia sp. VG12 TaxID=2021862 RepID=A0A222FBD5_9HYPH)

HSP 1 Score: 98.6 bits (244), Expect = 2.760e-18
Identity = 106/410 (25.85%), Postives = 178/410 (43.41%), Query Frame = 1
Query:    1 QVRTQFVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGEEYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPTKPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHAASQDPY--VIRFSVKNGGGQLRDADLEEIFTPFQNL-SKQGVKGSGVGLGLARCKRMAQELGGELSVEN--GAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGDDKSRGDAGRHGEYDIFTPAQIYHSATQPS--VLVVDDSAVARLQLKKMLTHVDITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGNNRTPIVLITADSTAATRQ--LCAGIADSVILEKPVQRSVLLRTITSSMKSPSA 1203
            + + +F+  ++H I T M   L    S LR+ +  T     V+   + G     ++ +IL + +   G       P  +R VV  +IVD    +++       + ++ G ++P + ++GD   +++ L  LV NA++  +   V + V    QDP      FSVK+ G  +     E +F  F  + S    K  G GLGLA CK++A  + GE+SVE+   A  TF    P+    D    +E                            P +    A      +LV +D+A  ++ +   L      VD  +   + + +A+RR YD I +DI M  M G+     ++ G   N  TP++ +TA S    R+  L AG+ D   L KPV++  LL  I  ++   +A
Sbjct:  664 EAKAKFLAMMSHEIRTPMNGVLG-ILSLLRDTNLDTAQADYVKTARESGRSLLELINDILDFSKLEAGRMELDSAPFRLRTVVK-SIVDLFLPIAQEKDLG--LFLNYGENIPEA-VVGDAGRLRQVLLNLVSNAIKFTELGSVEITVAIEKQDPVRPTFHFSVKDTGIGIPKDKHEALFGDFVTVDSSYTKKQGGTGLGLAICKQIAGLMDGEISVESLPAAGSTFHFLVPITLADDQTYIEE---------------------------VPREETREALPEGLIILVAEDNATNQIVVSHALDRAGCDVDIANNGREAVQLAQRRDYDCILMDISMPEMDGLEATGKIKAGGR-NATTPVIALTAYSLRGDRERFLAAGMED--FLAKPVEKEELLACIARNVHQAAA 1038          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QKY1_ESV1K2.760e-15252.11EsV-1-88 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LPB9_ECTSI8.140e-15252.82Histidine kinase n=1 Tax=Ectocarpus siliculosus Ta... [more]
UPI001BC67B002.970e-2028.90response regulator n=1 Tax=unclassified Jannaschia... [more]
A0A3D0X5V4_9FIRM4.500e-2025.31Histidine kinase n=1 Tax=Selenomonas sp. TaxID=205... [more]
A0A3D8JV52_9BURK7.150e-2026.15Histidine kinase n=2 Tax=Trinickia dinghuensis Tax... [more]
A0A7U8C8F8_NEPCE2.380e-1928.47Histidine kinase n=1 Tax=Neptuniibacter caesariens... [more]
H0SC37_BRAS31.340e-1825.49Histidine kinase n=2 Tax=unclassified Bradyrhizobi... [more]
H0TGY0_9BRAD1.340e-1826.23Histidine kinase n=1 Tax=Bradyrhizobium sp. STM 38... [more]
A0A1H3WLV3_9FIRM1.440e-1823.41Stage 0 sporulation protein A homolog n=2 Tax=Pseu... [more]
A0A222FBD5_9HYPH2.760e-1825.85Histidine kinase n=1 Tax=Labrenzia sp. VG12 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:148699..149985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog620914.JH621250_gene2201
PFAMsHATPase_c,HisKA,Response_reg,TPR_12,TPR_8
Model size1287
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.2e-22
EggNOG OGsCOG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,1HXPB@117743|Flavobacteriia,2YII3@290174|Aquimarina
Ec32 ortholog descriptionEsV-1-88 viral histidine kinase
Ec32 orthologEc-06_005930.1
DescriptionHis Kinase A (phosphoacceptor) domain
Cds size1287
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789711.022261-CDS-P-littoralis_Contig15:148698..1499851680789711.022261-CDS-P-littoralis_Contig15:148698..149985Pylaiella littoralis U1_48CDSP-littoralis_Contig15 148699..149985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.56.1prot_P-littoralis_Contig15.56.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 148699..149985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.56.1

>prot_P-littoralis_Contig15.56.1 ID=prot_P-littoralis_Contig15.56.1|Name=mRNA_P-littoralis_Contig15.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=429bp
QVRTQFVRNVAHRIDTDMVQRLARSSSRLREMSDTTTIPTLVRAVFDVGE
EYGAMMENILKYYQSVNGSFVRVDGPLLVRNVVSDAIVDAKTDMSRVTPT
KPVVDVSVGHDVPVSELIGDGPVIKECLRELVFNALRHDDDTHVSVDVHA
ASQDPYVIRFSVKNGGGQLRDADLEEIFTPFQNLSKQGVKGSGVGLGLAR
CKRMAQELGGELSVENGAEVTFSLTTPLAHDKDVVLQQEGGIEISYGRGD
DKSRGDAGRHGEYDIFTPAQIYHSATQPSVLVVDDSAVARLQLKKMLTHV
DITVDCCDGPLKCLDMARRRTYDLICLDIIMVGMTGITCAEHLRRGDTGN
NRTPIVLITADSTAATRQLCAGIADSVILEKPVQRSVLLRTITSSMKSPS
ALEWIRQAWYKEDESFSERSSRQPTMDE*
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mRNA from alignment at P-littoralis_Contig15:148699..149985+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.56.1 ID=mRNA_P-littoralis_Contig15.56.1|Name=mRNA_P-littoralis_Contig15.56.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1287bp|location=Sequence derived from alignment at P-littoralis_Contig15:148699..149985+ (Pylaiella littoralis U1_48)
CAGGTCAGGACTCAGTTTGTGAGAAACGTGGCGCACAGGATCGACACCGA CATGGTGCAGAGACTGGCACGGAGCTCGTCCAGATTGCGCGAAATGTCCG ACACGACGACGATACCGACTCTCGTCCGAGCGGTGTTCGACGTGGGCGAG GAGTACGGGGCCATGATGGAGAACATCTTGAAGTACTACCAGTCGGTCAA CGGCAGTTTCGTGAGGGTGGACGGCCCTCTCCTCGTTCGCAATGTCGTCT CCGACGCTATCGTGGACGCGAAAACGGACATGAGCAGAGTTACGCCAACG AAGCCGGTGGTTGACGTGAGCGTTGGGCACGACGTACCGGTCTCCGAGCT GATCGGGGACGGGCCGGTCATCAAGGAGTGTCTCCGCGAGCTCGTGTTCA ACGCGCTCCGCCACGACGACGACACCCACGTCTCCGTGGACGTGCATGCC GCGAGTCAGGACCCTTACGTCATTCGATTCTCGGTCAAGAACGGTGGCGG TCAACTCCGAGACGCGGACCTGGAAGAGATCTTCACCCCGTTTCAAAACT TGAGCAAGCAGGGTGTCAAGGGTTCCGGGGTCGGGCTGGGCCTGGCGAGG TGCAAACGCATGGCGCAGGAACTCGGCGGCGAGCTGTCGGTGGAGAACGG TGCAGAAGTCACCTTCTCGCTCACCACACCACTGGCGCACGACAAGGATG TCGTCCTGCAGCAGGAGGGCGGTATCGAGATATCGTACGGCCGCGGCGAC GACAAGAGCCGGGGGGACGCCGGAAGGCATGGGGAATACGACATCTTCAC ACCGGCACAAATATACCACTCCGCAACACAGCCGTCGGTGCTGGTCGTGG ACGACTCCGCGGTGGCGAGGTTGCAGCTGAAGAAAATGCTGACGCACGTC GACATCACCGTCGACTGTTGCGACGGTCCCTTGAAGTGTCTGGATATGGC GCGGCGCCGAACGTATGACCTCATCTGTCTCGACATCATCATGGTGGGCA TGACCGGCATCACCTGTGCCGAACACTTGCGGAGAGGTGACACGGGCAAC AACAGGACGCCGATTGTTCTCATCACGGCCGATTCGACGGCGGCAACAAG ACAGCTGTGTGCTGGCATCGCCGACAGCGTGATTCTCGAAAAGCCCGTGC AGCGCTCCGTCTTACTCCGAACCATCACGTCATCCATGAAAAGCCCGTCG GCCCTAGAGTGGATCCGCCAGGCCTGGTATAAAGAAGACGAATCTTTCAG CGAAAGATCAAGCCGTCAGCCAACCATGGACGAGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:148699..149985+

>mRNA_P-littoralis_Contig15.56.1 ID=mRNA_P-littoralis_Contig15.56.1|Name=mRNA_P-littoralis_Contig15.56.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1287bp|location=Sequence derived from alignment at P-littoralis_Contig15:148699..149985+ (Pylaiella littoralis U1_48)
CAGGTCAGGACTCAGTTTGTGAGAAACGTGGCGCACAGGATCGACACCGA
CATGGTGCAGAGACTGGCACGGAGCTCGTCCAGATTGCGCGAAATGTCCG
ACACGACGACGATACCGACTCTCGTCCGAGCGGTGTTCGACGTGGGCGAG
GAGTACGGGGCCATGATGGAGAACATCTTGAAGTACTACCAGTCGGTCAA
CGGCAGTTTCGTGAGGGTGGACGGCCCTCTCCTCGTTCGCAATGTCGTCT
CCGACGCTATCGTGGACGCGAAAACGGACATGAGCAGAGTTACGCCAACG
AAGCCGGTGGTTGACGTGAGCGTTGGGCACGACGTACCGGTCTCCGAGCT
GATCGGGGACGGGCCGGTCATCAAGGAGTGTCTCCGCGAGCTCGTGTTCA
ACGCGCTCCGCCACGACGACGACACCCACGTCTCCGTGGACGTGCATGCC
GCGAGTCAGGACCCTTACGTCATTCGATTCTCGGTCAAGAACGGTGGCGG
TCAACTCCGAGACGCGGACCTGGAAGAGATCTTCACCCCGTTTCAAAACT
TGAGCAAGCAGGGTGTCAAGGGTTCCGGGGTCGGGCTGGGCCTGGCGAGG
TGCAAACGCATGGCGCAGGAACTCGGCGGCGAGCTGTCGGTGGAGAACGG
TGCAGAAGTCACCTTCTCGCTCACCACACCACTGGCGCACGACAAGGATG
TCGTCCTGCAGCAGGAGGGCGGTATCGAGATATCGTACGGCCGCGGCGAC
GACAAGAGCCGGGGGGACGCCGGAAGGCATGGGGAATACGACATCTTCAC
ACCGGCACAAATATACCACTCCGCAACACAGCCGTCGGTGCTGGTCGTGG
ACGACTCCGCGGTGGCGAGGTTGCAGCTGAAGAAAATGCTGACGCACGTC
GACATCACCGTCGACTGTTGCGACGGTCCCTTGAAGTGTCTGGATATGGC
GCGGCGCCGAACGTATGACCTCATCTGTCTCGACATCATCATGGTGGGCA
TGACCGGCATCACCTGTGCCGAACACTTGCGGAGAGGTGACACGGGCAAC
AACAGGACGCCGATTGTTCTCATCACGGCCGATTCGACGGCGGCAACAAG
ACAGCTGTGTGCTGGCATCGCCGACAGCGTGATTCTCGAAAAGCCCGTGC
AGCGCTCCGTCTTACTCCGAACCATCACGTCATCCATGAAAAGCCCGTCG
GCCCTAGAGTGGATCCGCCAGGCCTGGTATAAAGAAGACGAATCTTTCAG
CGAAAGATCAAGCCGTCAGCCAACCATGGACGAGTGA
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