mRNA_P-littoralis_Contig15.52.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.52.1
Unique NamemRNA_P-littoralis_Contig15.52.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: Q8QNI4_ESV1K (DNA polymerase n=3 Tax=root TaxID=1 RepID=Q8QNI4_ESV1K)

HSP 1 Score: 1693 bits (4384), Expect = 0.000e+0
Identity = 810/1042 (77.74%), Postives = 930/1042 (89.25%), Query Frame = 1
Query:    4 MELYLHDIRDNSASLQNPTMQLFAMEEDGTNVFVSVKNFRTYLYVGFDFDISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEFNGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKFFHSSGVRPSSYFRMENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQDRKPPPMTICSYDLETSGLSTTDDFIFQASMIFSRLGDSVGKNASDAGRHAVDACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGYNTFKFDSQFLYKRAEKYSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNELKQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILEACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTYIVGRGQQIKCLSLILNRTHGEFVCNYTP-EKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVIYGDTDSVMVIFPEHRKIENLRDKMKFCFDMGTRVSKEVTDLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDLTVRKELKQWVYQHPTPHATLALKIVERAKEQAVFRDLVKGAYETPGGYDDSALSSAWTKVSNMRTFLSARAKKEVPLKTIIEGIQSENDGPFKAEAYAIPALRRLYDDICGVLRSDKNTHTIGLLSAGVSDAHALGERYMAFVRYDVVDWDPPTLGDRIPYVITTGRGDISSRAEDPRMVRAGRCRPDFLYYINHQLEKPMVDLLQHVIDSPKTLFVDTRRRVTNGNHGRREITTFFKRIK 3126
            MELYLHDIRDNS S QNPTMQLFAMEEDGTNVFVSVKNF+TYLYVGFD DIS++SVR+NY+E+F+QE W R+V+KMSVVKRKRLIGFS+G LFP+IL+EF G+I FY+VRKHL  L GER+P P  FVDL +YPGM VYE + VDS+LKFFH+SGVRPSSYFRMENY RVAD+A++THC KE++V F ++ P      DRKPPPMTICSYDLETSGL+T +D+IFQASMIFSRLGD    +   A  HAVD+  DGVVICVG TES+DGTP+L+VENE+QLLD FR IL+ERGCN+LCGYNTFKFDS FLYKRAE+Y F+GFK LSFIKDL CDLEVKTLQSAALGKNELKQ+IIPGRVEIDLFMVMRRSQKL SYKLNAVC+KFFGG KDDVTY DIL+ACT+KDP+KLGVIAKYCYQDSGLVL+LLDKIKEVYDATEMAKLC VPLTYIVGRGQQIKC+SLILNR HGE+VCNY   +K++  DGKQV  +GYKGASVIDAKKGFYE DP+VTMDFASLYPSIMRLKQLCYTT V++ KYRGI+GV YEDH+++DGV+ TFAHRPGS+SILCE+EE+LGEER+ATKK MK E DPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMI+RTKEYAE+ HGCNVIYGDTDSVMVIFPEHR IENL DKM++CFDMGT+VSKE++++FG+P+LLEFENIYFKYLLVSKKRYAGLSWE+VEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDV V DGR  VK+H+TETLLRLERG++S+EDLT+RKELKQWVY+ P+PHATLALKI+ER KEQAVFR+ +K AYET GGYDDS LSS WTK++N++++LS RAK+E+ +  ++E I+ +   PFKAEAYA+ ALR+LYDD+  VL  +     +GL+ AG+ D H LGERYMAFVRY++VDWDPPTLG+RIPYVITTG+GDISSRAEDPRMV  GRCRPDFLYYI+HQL  PMVDLLQHVI+SP +LFV+++RR++N NHGR+EITTFFK+ K
Sbjct:    1 MELYLHDIRDNSGSFQNPTMQLFAMEEDGTNVFVSVKNFKTYLYVGFDLDISEDSVRSNYLEKFKQEKWERNVYKMSVVKRKRLIGFSNGDLFPYILMEFTGTISFYIVRKHLHELCGERDPGPNTFVDLNKYPGMCVYESKSVDSILKFFHASGVRPSSYFRMENYVRVADKARKTHCAKEFIVDFVNVRPVGEEVVDRKPPPMTICSYDLETSGLNTNEDYIFQASMIFSRLGDPCPDSEGSATGHAVDSYTDGVVICVGDTESVDGTPLLIVENELQLLDKFREILVERGCNILCGYNTFKFDSAFLYKRAERYGFDGFKKLSFIKDLACDLEVKTLQSAALGKNELKQIIIPGRVEIDLFMVMRRSQKLSSYKLNAVCDKFFGGKKDDVTYADILQACTSKDPKKLGVIAKYCYQDSGLVLKLLDKIKEVYDATEMAKLCTVPLTYIVGRGQQIKCMSLILNRIHGEYVCNYAAAKKKMAADGKQVLNEGYKGASVIDAKKGFYEKDPIVTMDFASLYPSIMRLKQLCYTTIVRDVKYRGIEGVNYEDHQISDGVSVTFAHRPGSRSILCELEEMLGEERKATKKLMKSEKDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIKRTKEYAEKEHGCNVIYGDTDSVMVIFPEHRNIENLGDKMRYCFDMGTKVSKEISEMFGHPILLEFENIYFKYLLVSKKRYAGLSWETVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVDVTDGRGAVKKHLTETLLRLERGQISIEDLTIRKELKQWVYKTPSPHATLALKILERTKEQAVFREFIKPAYETIGGYDDSLLSSVWTKMTNLKSYLSVRAKREIAMSDMVESIRGDTTSPFKAEAYAVVALRQLYDDVHSVLVGESFARVVGLVMAGIGDVHKLGERYMAFVRYNIVDWDPPTLGERIPYVITTGKGDISSRAEDPRMVNVGRCRPDFLYYIDHQLRNPMVDLLQHVIESPSSLFVESQRRMSNLNHGRKEITTFFKKRK 1042          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: B5LWI2_9PHYC (DNA polymerase n=2 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWI2_9PHYC)

HSP 1 Score: 817 bits (2110), Expect = 1.310e-279
Identity = 474/1060 (44.72%), Postives = 648/1060 (61.13%), Query Frame = 1
Query:    4 MELYLHDIR-DN------SASLQNPTM-QLFAMEEDGTNVFVSVKNFRTYLYVGFDFDISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEFNGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKFFHSSGVRPSSYFRMENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQDRKPPPMTICSYDLETSGLSTTDDFIFQASMIFSRLGDSVGKNASDAGRHAVDACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGYNTFKFDSQFLYKRA-EKYSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNELKQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILEACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTYIVGRGQQIKCLSLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVIYGDTDSVMVIFPEHRKI--ENLRDKMKFCFDMGTRVSKEVTDLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDLTVRKELKQWVYQHPTP--HATLALKIVERAKEQAVFRDLVKGAYETPGGYDDSALSSAWTKVSNMRTFLSARAKKEVP----LKTIIEGIQSENDGPFKAEAYAIPALRRLYDDICGVLRSDKNTHTIGLLSAGVSDAHALGERYMAFVRYDVVDWDPPTLGDRIPYVITTGRGDISSRAEDPRMVR-AGRCRPDFLYYINHQLEKPMVDLLQHVIDSPKTL---FVDTRRRVTNGNHGRREITTFFKR 3120
            ++L+LHD R DN      S+S+++ T+ Q+FA+ EDG   +V VKNFR + YV    D+++    A +     ++ W R+V    +V RKR IGF+DGK F ++L+ F G IP Y  RK+L  L                   +H++E   VD +LKFFHSSG++PSSYF M+ +  V +   +THC +EY V+  +L P         PPP+ +CSYD+E+SGL    D++FQ S+ F  LG+ +   +         A +D  VICVG  ES++GTPIL V+NE+QLL  FR I++ER   +L GYN+++FD QFLYKRA + Y+++ F  + F+++ K  L+ K L+S+ALGKNEL Q +IPGRVE D  M +RR+ KL SYKL++VC  FFGG KDDV+Y+ IL AC +KDP+KLGVIAKYC QD+ L L+L+  +K+VY+  EM+KLC VPL+YI  RGQQIKCLSLIL+R HGEFVCN     RV   G +     ++GA+VIDA KGF+  DPVV +DFASLYPSI+R K LCYTT++  D++  I GV YE  E++ GV  TFA RPG K IL  IEE LGE RR TK  MK E D     LL+SKQ AQKVTMNS+YGF GTVN G LPLV IAAAVT TGR MI+ T ++     G  VIYGDTDSVM  FP  + +  +  R  +   + MG    ++   LFG+PV LE+E IYF +LL+SKKRYA +S++  +  P M+  GLVTVRRDNA  V  CA+  I +LM+     G+  V E+V   L +LE  E+ VEDLT+  ELK+   Q+ TP  H+ LA K+  RAK Q ++R++V+   E  G     +L +A+  +  +R   S   +++V     L+ +  G  +E     K  A  +     L             +    L+  G+     L + Y  F  +D + W+  +LG R+PYVI  G G ++ R+EDPR V  A   R D  YYI+ QL+ P++ +++   D   +L   F +  RR  N N GRREIT+FF+R
Sbjct:    3 LKLFLHDARIDNVASPSGSSSIRDTTLVQIFAVAEDGRPTYVQVKNFRPWFYV----DLNEFFTFAQFKSVVAEQYWARNVVSCELVARKRFIGFADGKSFDYVLMTFTGLIPMYCSRKYLRTLK------------------VHLHED-SVDPLLKFFHSSGIKPSSYFEMDGFV-VWNGQGKTHCSREYYVAVQNLRP---SADSGSPPPIPMCSYDIESSGLDPASDYVFQVSLCFGFLGEDLDSRS---------AISDSFVICVGDVESVEGTPILCVQNELQLLKKFREIVVERQVCILVGYNSYQFDGQFLYKRAVDTYNYQDFCKIGFLRNDKASLKTKVLESSALGKNELSQFVIPGRVEFDALMTVRRNHKLGSYKLDSVCRHFFGGKKDDVSYEYILSACESKDPKKLGVIAKYCLQDAWLTLRLVSSLKDVYNGLEMSKLCVVPLSYIESRGQQIKCLSLILDRVHGEFVCNKA--SRVLPGGVK-----FQGATVIDATKGFHNKDPVVCLDFASLYPSIIRWKNLCYTTYLDSDEFANIPGVHYERFEISPGVYETFATRPGHKGILSAIEEDLGEARRQTKAAMKVEKDSKKLQLLNSKQLAQKVTMNSLYGFCGTVN-GCLPLVAIAAAVTCTGRSMIKTTADFIRTEMGGTVIYGDTDSVMCTFPAPQTVRGQGKRALLGHAYAMGLSAEEKSLSLFGHPVKLEYEKIYFPFLLISKKRYACMSYDRPDSEPKMSTSGLVTVRRDNAKVVRDCANGVISILME---GRGQGDVVEYVKTVLSKLENSEIGVEDLTISNELKKHPDQYATPSAHSVLAGKLNARAKNQKLYREIVRPVVEQGGV---PSLGTAYGVLEGVRRKFSFDQRRDVSYEEFLRDLANGRVAEK---LKGSAPRVSECESLV-----------GSTEAKLIQEGIRTEKILNDMYREFSVFDRMYWEAQSLGSRVPYVIVRGNGSVNERSEDPRFVEMADHLRIDTKYYIDQQLKNPILGIVEAFPDGRASLERVFREFSRRADNANKGRREITSFFER 998          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: Q6XM69_9PHYC (DNA polymerase n=2 Tax=root TaxID=1 RepID=Q6XM69_9PHYC)

HSP 1 Score: 797 bits (2058), Expect = 1.170e-271
Identity = 462/1060 (43.58%), Postives = 639/1060 (60.28%), Query Frame = 1
Query:    1 IMELYLHD-IRDN------SASLQNP---TMQLFAMEEDGTNVFVSVKNFRTYLYVGFDFDISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEFNGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKFFHSSGVRPSSYFRMENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQD-RKPPPMTICSYDLETSGLSTTDDFIFQASMIFSRLGDSVGKNASDAGRHAVDACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGYNTFKFDSQFLYKRAEK-YSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNELKQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILEACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTYIVGRGQQIKCLSLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVIYGDTDSVMVIFPEHRKIENLRDK--MKFCFDMGTRVSKEVTDLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDLTVRKELKQWVYQHPTP--HATLALKIVERAKEQAVFRDLVKGAYETPGGYDDSALSSAWTKVSNMRTFLSARAKKEVPLKTIIEGIQSENDGPFKAEAYAIPALRRLYDDICGVLRSDKNTHTIGLLSAGVSDAHALGERYMAFVRYDVVDWDPPTLGDRIPYVITTGRGDISSRAEDPRMVR-AGRCRPDFLYYINHQLEKP---MVDLLQHVIDSPKTLFVDTRRRVTNGNHGRREITTFFKR 3120
            ++ L+LHD + DN      +A+ Q P    +++FA+ + G   +V VKNFR + Y+    D+   +    +  R   E W R+V    VV++KR IGFSD ++F ++ ++F G +P Y  RK L                     G  +YE   +D +LKFFHSSGVRPSSYF ++++     + K THC  EY V   ++      + D   PPPM +C+YD+E+SGL  T D++FQ SM F  LG+ VG         A  A +D VV+CVG T S+  TP+L V+NE +LL  FR ++I+R   +L GYN+++FD QFLYKRA   Y F  F  + F+++  C L  K L+S+ALGKNEL Q +IPGRVE D  M +RR+ KL SYKL++VC+ FFGG KDDV+Y  I++AC +KDP  LG IAKYC QDS L L+L+  +K+VY+  EM+KLC VPL +I  RGQQIKCLSLIL+R H E+V N +  + +E   +Q     ++GA+VI AKKGF+  DPVV +DFASLYPSI+R K LCYTT V  D++  IDGV YE  EV+ GV  TFA RPG   IL  IEE LGE R+ TK+RMK ETDP    LL+SKQ AQK+TMNS+YGF GTV  G LPLV IAAAVT+TGR MI+RT ++        VIYGDTDSVM  FP  + + +  +K  ++  ++ G +  ++  +LFG+PV LE+E +YF +LL+SKKRYA + +E+ +  P +T  GLVTVRRDNA  V  CA+E I +LM+   AD    V ++V   L  ++ G + +E LT+  ELK+   Q+ TP  H+ LA K   RA+ Q +FR+L+K  YE         L  A     N+R  +S + K++VP    +  +      P K +            ++     S    + +  L AG+     L E+Y  F  YD + W+ P LG R+PYVI  G+G ++ R+EDP  V+ AG  R D  YY++ QL +P   MV+      +S   +F +  R+  N N+GRREITT+F+R
Sbjct:    1 MLRLFLHDALVDNVPKLGAAANKQFPEVSVVRIFAVTQKGEPTYVEVKNFRPWFYI----DLVGGTTFDEFKVRVENEFWFRNVVSCEVVRKKRFIGFSDDRVFDYVQVKFTGLVPMYTARKALR-------------------DGFRIYEDH-IDPLLKFFHSSGVRPSSYFEIQDFTTWTGQGK-THCSLEYYVVAENIR--HCVDLDGAPPPPMPMCAYDIESSGLDPTSDYVFQVSMCFGYLGEDVG---------ARTAVSDSVVVCVGQTTSLQDTPVLCVDNEYELLKKFRDLIIQRQICILVGYNSYQFDGQFLYKRAVNVYRFNDFCKIGFLRNSACTLTSKVLESSALGKNELSQFVIPGRVEFDALMTVRRNHKLGSYKLDSVCKHFFGGEKDDVSYGYIIQACKSKDPEALGKIAKYCLQDSWLTLKLVSFLKDVYNGLEMSKLCVVPLRFIESRGQQIKCLSLILDRIHSEYVLNRS--RALEQQDQQCK---FQGATVISAKKGFHCDDPVVCLDFASLYPSIIRWKNLCYTTHVDSDEFLDIDGVDYEKFEVSAGVYETFARRPGRPGILAMIEEDLGEARKLTKRRMKSETDPTLLQLLNSKQLAQKITMNSLYGFCGTVR-GCLPLVAIAAAVTATGRFMIKRTADFIRNDMKGVVIYGDTDSVMCTFPVEQSVRDQGNKALLEHAYEKGLQAEQQSLELFGHPVKLEYEKMYFPFLLLSKKRYASMCYETPDTAPKITTSGLVTVRRDNAKIVRDCANEVIRILMERQGADN---VVKYVDSVLRAMDDGTLDLEMLTISNELKKHPEQYSTPSAHSVLAGKRRYRARVQKLFRELIKPVYENEPVRLSLDLRGAHMAFENLRRTISFQQKRDVPFAEFVTMLAEAKIKPTKDKR----------GELLEKCTSFLGKNEVRFLEAGIHSEVVLDEKYREFAGYDRMYWENPGLGTRVPYVIVRGKGSVNERSEDPTYVKIAGEIRVDTKYYVDQQLRRPIMGMVESFPQCRESLARVFDEYSRKAENANNGRREITTYFQR 1005          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: W8W399_PYLLI (DNA-directed DNA polymerase (Fragment) n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=W8W399_PYLLI)

HSP 1 Score: 400 bits (1029), Expect = 8.340e-130
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 1
Query: 1387 SLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVI 1986
            SLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDF SLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDS QKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVI
Sbjct:    1 SLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFESLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSXQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVI 200          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: W8W3D4_9PHAE (DNA-directed DNA polymerase (Fragment) n=1 Tax=Myriotrichia claviformis TaxID=64930 RepID=W8W3D4_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 1.370e-107
Identity = 168/202 (83.17%), Postives = 181/202 (89.60%), Query Frame = 1
Query: 1384 LSLILNRTHGEFVCNYTPEKR-VEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVI 1986
            +SLI NRTHGEFVCNY P KR    DGKQVP +GYKGASVIDAKKGFYE DP+VTMD  SLYPSIMRLKQLCYTT V++ KYR I+GV YEDHEV++GV ATFAHRPGSKSILCE+EEVLGEER+ATKK MK E DPFAYSLLDS+QKA KVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMI+RTKEYAE+ HGCNVI
Sbjct:    1 MSLIXNRTHGEFVCNYMPAKRKTTADGKQVPNEGYKGASVIDAKKGFYEKDPIVTMDXNSLYPSIMRLKQLCYTTIVRDSKYRAIEGVSYEDHEVSEGVYATFAHRPGSKSILCELEEVLGEERKATKKLMKSEKDPFAYSLLDSRQKAHKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIKRTKEYAEQEHGCNVI 202          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: W8W369_9PHAE (DNA-directed DNA polymerase (Fragment) n=2 Tax=Ectocarpus fasciculatus TaxID=43935 RepID=W8W369_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 1.910e-107
Identity = 166/202 (82.18%), Postives = 183/202 (90.59%), Query Frame = 1
Query: 1384 LSLILNRTHGEFVCNYTP-EKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVI 1986
            +SLILNR HGE+VCNY   +K++  DG QV  DGYKGASVIDAKKGFYE DPVVTMDFASLYPSIMRLKQLCYTT VK+DKYRGI+G+VYEDH+++D    TFAHRPGS+SILCE+EE+LGEER+ATKK MK E DPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMI+RTKEYAE+ HGCNVI
Sbjct:    1 MSLILNRIHGEYVCNYAAAKKKMAADGTQVLNDGYKGASVIDAKKGFYEQDPVVTMDFASLYPSIMRLKQLCYTTIVKDDKYRGIEGIVYEDHQISDEAIVTFAHRPGSRSILCELEEMLGEERKATKKLMKSEKDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIKRTKEYAEKEHGCNVI 202          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: W8W341_9PHAE (DNA-directed DNA polymerase (Fragment) n=1 Tax=Hincksia hincksiae TaxID=133510 RepID=W8W341_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 3.920e-106
Identity = 164/202 (81.19%), Postives = 185/202 (91.58%), Query Frame = 1
Query: 1384 LSLILNRTHGEFVCNYTP-EKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAERAHGCNVI 1986
            +SLILNR HGEFVCNY+P +K+V  DG +V  +G+KGASVI+AKKGFYE DPVVTMDFASLYPSIMRLKQLCYTT VK+ KYRGI+G+VYEDHE++DGV+ TFAHRPGSKSILCE+EE+LG+ER+ATK  MK E DPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGR+MI+RTKEYAE  HGCNV+
Sbjct:    1 MSLILNRIHGEFVCNYSPVKKKVAADGNEVLLEGFKGASVIEAKKGFYEKDPVVTMDFASLYPSIMRLKQLCYTTIVKDLKYRGIEGIVYEDHEISDGVSVTFAHRPGSKSILCELEEMLGDERKATKTLMKSEKDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRNMIKRTKEYAETEHGCNVV 202          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: A0A2T4H355_FUSCU (DNA polymerase n=5 Tax=Fusarium TaxID=5506 RepID=A0A2T4H355_FUSCU)

HSP 1 Score: 356 bits (914), Expect = 2.530e-102
Identity = 259/826 (31.36%), Postives = 411/826 (49.76%), Query Frame = 1
Query:   58 TMQLFAMEEDGTNVFVSVKNFRTYLYVG--FDFDISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEFNGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKFFHSSGVRPSSYFRM--ENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQDRKPPPMTICSYDLETSGLS-----TTDDFIFQASMIFSRLGDSVGKNASDAGRHAVDACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGYNTFKFDSQFLYKRAEKYSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNELKQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILEACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTYIVGRGQQIKCLSLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAER--------AHGCNVIYGDTDSVMVIFPEHRKIENLRDKMKFCFDMGTRVSKEVTDLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDLTVRKELKQWVYQHPTPHATLALKIVER 2484
            T++LF + E G +V + V +F+ YLYV    +F   D +    Y+E  +      S+H ++   R+ + GF   +  P+  L+   + P ++ R    + SG       ++  + R  G  V     +  +L+F     VR  S+     + Y  V D  ++++C  E  V++ DL       +  K  P+ I S+D+E +G          D + Q + I ++ G+      +              V C+  T SI  T IL  E E ++L  +++ LI    +++ GYN   FD  +L  RA+     GF+  + I  ++   +     S  +G  + K     GR+++DL  +++R  +L SY LN+VC  F G  K+DV +  I E      P     +A YC +D+ L  +L+DK+  + + TEMA++  VP  +++ RGQQIK +S +  +   + +    P  + E   +Q     Y+GA+VI+  +G+Y+  P+ T+DFASLYPSIM+   LCYTT V +      +    ED+ V      TF      K +L +I E L   R+  K+ +  ETDPF  ++L+ +Q A K++ NS+YG TG    G LP +EIA++ TS GR MI +TKE  E         +H   VIYGDTDSVM+ F      ++L++ MK    +G   SK V+D F  P+ LEFE +YF YLL++KKRYAGL W   E    M  KG+ TVRRDN   V     + + M++      G    +E+V ET+  L + +V +  L + K L +  Y     H  LA ++ +R
Sbjct:  124 TVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLET-QVAQHQPSIHSVTFAMRENIYGFQGNQSKPY--LKVTVTDPKFINRVRTTIQSGN-----ANWKGMWRNDG-EVQTFDNLQYLLRFMVDCKVRGMSWVEAPAKTYKLVNDHIRQSNCQIEAEVNYLDLIAHEPVGEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFVRN--------------VFCLQETSSIVATQILAYEKEEKMLSDWQKFLIRTDPDIITGYNISNFDFPYLLDRAKHLKVAGFEYWTRIPSMQSRAKETNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCANFLGEQKEDVHHTMITELFNGT-PESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFISQLFRKALEQKLV--IPNLKSEASDEQ-----YEGATVIEPTRGYYDV-PIATLDFASLYPSIMQAHNLCYTTLVSKKAIEAFNLQKDEDYIVTPNGD-TFVTIKQRKGLLAQILEELLSARKQAKRELAVETDPFKKAVLNGRQLALKISANSVYGLTGATT-GKLPCLEIASSTTSFGRKMIEKTKEEVEGRYNIANGYSHDAQVIYGDTDSVMIKFGT----KDLQEAMK----LGEEASKYVSDKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQTVIEKVLRMILIDQDVPG---AQEYVKETIADLLQNKVDMSKLVITKALTKDDYAAKQAHVELAQRMKKR 904          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: A0A395MID1_9HYPO (DNA polymerase n=5 Tax=Fusarium TaxID=5506 RepID=A0A395MID1_9HYPO)

HSP 1 Score: 355 bits (912), Expect = 4.810e-102
Identity = 258/826 (31.23%), Postives = 411/826 (49.76%), Query Frame = 1
Query:   58 TMQLFAMEEDGTNVFVSVKNFRTYLYVG--FDFDISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEFNGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKFFHSSGVRPSSYFRM--ENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQDRKPPPMTICSYDLETSGLS-----TTDDFIFQASMIFSRLGDSVGKNASDAGRHAVDACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGYNTFKFDSQFLYKRAEKYSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNELKQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILEACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTYIVGRGQQIKCLSLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAER--------AHGCNVIYGDTDSVMVIFPEHRKIENLRDKMKFCFDMGTRVSKEVTDLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDLTVRKELKQWVYQHPTPHATLALKIVER 2484
            T++LF + E G +V + V +F+ YLYV    +F   D +    Y+E  +      ++H ++   R+ + GF   +  P+  L+   + P ++ +    + SG       ++  + R  G  V     +  +L+F     VR  S+     + Y  V D  ++++C  E  VS+ DL       +  K  P+ I S+D+E +G          D + Q + I ++ G+      +              V C+  T SI  T IL  E E ++L  +++ LI    +++ GYN   FD  +L  RA+     GF+  + I  ++   +     S  +G  + K     GR+++DL  +++R   L SY LN+VC  F G  K+DV +  I E      P     +A YC +D+ L  +L+DK+  + + TEMA++  VP  +++ RGQQ+K +S +  +   + +    P  + E   +Q     Y+GA+VI+  +G+Y+  P+ T+DFASLYPSIM+   LCYTT V +      +    ED+ V      TF      K +L +I E L   R+  K+ +  ETDPF  ++L+ +Q A KV+ NS+YG TG    G LP +EIA++ TS GR MI +TKE  E+        +H   VIYGDTDSVM+ F      ++LR+ MK    +G   SK V++ F  P+ LEFE +YF YLL++KKRYAGL W   E    M  KG+ TVRRDN   V     + + M++      G    +E+V ET+  L + +V +  L + K L +  Y     H  LA ++ +R
Sbjct:  124 TVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLET-QIAQHQPTIHSVAFAMRENIYGFQGNQSKPY--LKVTVTDPKFINKVRTTIQSGN-----ANWKGMWRNDG-EVQTFDNLQYLLRFMVDCKVRGMSWVEAPAKTYKLVNDHIRQSNCQIEAEVSYLDLIAHEPVGEWSKMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFVRN--------------VFCLQETGSIVATQILAYEKEEKMLSDWQKFLIRADPDIITGYNISNFDFPYLLDRAKHLKVPGFEYWTRIPSMQSKAKETNFSSKQMGNRDTKATNTNGRLQLDLLQLIQRDHHLRSYTLNSVCANFLGEQKEDVHHTMITELFNGT-PESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQVKFISQLFRKALEQKLV--IPNLKSEASDEQ-----YEGATVIEPTRGYYDV-PIATLDFASLYPSIMQAHNLCYTTLVSKKAIEAFNLQKDEDYIVTPNGD-TFVTTKQRKGLLAQILEELLAARKQAKRELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATT-GKLPCLEIASSTTSFGRKMIEKTKEEVEKRYNIANGYSHDAQVIYGDTDSVMIKFGT----KDLREAMK----LGEEASKFVSEKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQTVIEKVLRMILIDQDVQG---AQEYVKETIADLLQNKVDMSKLVITKALAKDDYAAKQAHVELAQRMKKR 904          
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Match: A0A0P7BLJ8_9HYPO (DNA polymerase n=3 Tax=Nectriaceae TaxID=110618 RepID=A0A0P7BLJ8_9HYPO)

HSP 1 Score: 355 bits (912), Expect = 4.890e-102
Identity = 252/826 (30.51%), Postives = 409/826 (49.52%), Query Frame = 1
Query:   58 TMQLFAMEEDGTNVFVSVKNFRTYLYVG--FDFDISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEFNGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKFFHSSGVRPSSYFRM--ENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQDRKPPPMTICSYDLETSGLS-----TTDDFIFQASMIFSRLGDSVGKNASDAGRHAVDACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGYNTFKFDSQFLYKRAEKYSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNELKQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILEACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTYIVGRGQQIKCLSLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVIDAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYEDHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYSLLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKEYAER--------AHGCNVIYGDTDSVMVIFPEHRKIENLRDKMKFCFDMGTRVSKEVTDLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRRDNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDLTVRKELKQWVYQHPTPHATLALKIVER 2484
            T++LF + + G +V + V +F+ YLYV     F   D +    Y+E  +      ++H +++  R+ + GF      P+  L+   + P ++ +    + SG       ++  + +  G  +     +  VL+F     V   S+     + +  + D  ++++C  E  VS+ DL   +   +  K  P+ I S+D+E +G          D + Q + + +R G+      +              V C+  T SI  T I+  E E ++L  +++ LIE   +++ GYN   FD  +L  RA      GF   S +  +    +   L S  +G  + K   I GR+++DL  +++R  +L SY LN+V   F G  K+DV Y  I E      P     +A YC +D+ L  +L+DK+  + + TEMA++  VP  +++ RGQQIK +S +  +   + +    P  + E   +Q     Y+GA+VI+  +G+Y+  P+ T+DFASLYPSIM+   LCYTT +K  K     G+  ++  +      TF      K +L +I E L   R+  K+ +  ETDPF  ++L+ +Q A K++ NS+YG TG    G LP + IA++ TS GR MI RTKE  E         +H   VIYGDTDSVM+ F      ++L++ M+    +G   SK V+D F  P+ LEFE +YF YLL++KKRYAGL W   E    M  KG+ TVRRDN   V     + + M++      G    +++V ET+  L + +V +  L + K L +  Y     H  LA ++ +R
Sbjct:  123 TVKLFGVNDAGNSVMLHVTDFKHYLYVPAPIGFQPKDCAAFKAYLET-QVAQHQPTIHSVALAMREDIYGFQGNVAKPY--LKVTTTDPKFINKVRATIQSGY-----ANWKGMWKTGGQEIQTYDNIQYVLRFMVDCKVHGMSWVEAPAKTFKLLPDHLRQSNCQIEAQVSYRDLIAHKPVNEWSKMAPLRILSFDIECAGRKGIFPEANQDSVIQIANVVTRYGEKKPFVRN--------------VFCLQETSSIVATQIVSFEKEEEMLRKWQKFLIEIDPDIITGYNIANFDFPYLLDRARHLKVNGFDYWSRLPSVASRAKETNLSSKQMGNRDTKATNINGRLQLDLLQLIQRDHQLRSYTLNSVSAHFLGEQKEDVHYTMITELFNGT-PESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNFLLSRGQQIKFVSQLFRKALEQKLV--IPNLKSEASDEQ-----YEGATVIEPTRGYYDV-PIATLDFASLYPSIMQAHNLCYTTLLKNKKDIETLGLKKDEDYIVTPNGDTFVTAKQRKGLLAQILEELLSARKQAKRELAIETDPFKKAVLNGRQLALKISANSVYGLTGATT-GKLPCLAIASSTTSFGRQMIERTKEEVENRYNIANGYSHDAQVIYGDTDSVMIKFGT----KDLKEAMR----LGEEASKFVSDKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQTVIEKVLRMILIDQDVQG---AQDYVKETIADLLQNKVDMSKLVITKALTKDDYAAKQAHVELAHRMKKR 905          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNI4_ESV1K0.000e+077.74DNA polymerase n=3 Tax=root TaxID=1 RepID=Q8QNI4_E... [more]
B5LWI2_9PHYC1.310e-27944.72DNA polymerase n=2 Tax=Feldmannia species virus Ta... [more]
Q6XM69_9PHYC1.170e-27143.58DNA polymerase n=2 Tax=root TaxID=1 RepID=Q6XM69_9... [more]
W8W399_PYLLI8.340e-13099.00DNA-directed DNA polymerase (Fragment) n=1 Tax=Pyl... [more]
W8W3D4_9PHAE1.370e-10783.17DNA-directed DNA polymerase (Fragment) n=1 Tax=Myr... [more]
W8W369_9PHAE1.910e-10782.18DNA-directed DNA polymerase (Fragment) n=2 Tax=Ect... [more]
W8W341_9PHAE3.920e-10681.19DNA-directed DNA polymerase (Fragment) n=1 Tax=Hin... [more]
A0A2T4H355_FUSCU2.530e-10231.36DNA polymerase n=5 Tax=Fusarium TaxID=5506 RepID=A... [more]
A0A395MID1_9HYPO4.810e-10231.23DNA polymerase n=5 Tax=Fusarium TaxID=5506 RepID=A... [more]
A0A0P7BLJ8_9HYPO4.890e-10230.51DNA polymerase n=3 Tax=Nectriaceae TaxID=110618 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:141315..144449 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog654926.Q8QNI4_ESV1K
Model size3135
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004527,GO:0004540,GO:0005575,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016032,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0018130,GO:0018995,GO:0019058,GO:0019079,GO:0019438,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0039686,GO:0039693,GO:0042025,GO:0042221,GO:0043170,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0046483,GO:0050896,GO:0051704,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902074
Exons1
Evalue0.0
EggNOG OGs4QB40@10239|Viruses,4QV3M@35237|dsDNA viruses no RNA stage
DescriptionDNA polymerase family B
Cds size3132
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789710.8659265-CDS-P-littoralis_Contig15:141314..1444461680789710.8659265-CDS-P-littoralis_Contig15:141314..144446Pylaiella littoralis U1_48CDSP-littoralis_Contig15 141315..144446 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789710.8809137-UTR-P-littoralis_Contig15:144446..1444491680789710.8809137-UTR-P-littoralis_Contig15:144446..144449Pylaiella littoralis U1_48UTRP-littoralis_Contig15 144447..144449 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.52.1prot_P-littoralis_Contig15.52.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 141315..144446 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.52.1

>prot_P-littoralis_Contig15.52.1 ID=prot_P-littoralis_Contig15.52.1|Name=mRNA_P-littoralis_Contig15.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1044bp
MELYLHDIRDNSASLQNPTMQLFAMEEDGTNVFVSVKNFRTYLYVGFDFD
ISDESVRANYVERFRQETWMRSVHKMSVVKRKRLIGFSDGKLFPFILLEF
NGSIPFYVVRKHLDVLSGEREPAPGDFVDLGRYPGMHVYEGRGVDSVLKF
FHSSGVRPSSYFRMENYARVADRAKRTHCPKEYVVSFGDLSPPRAREQDR
KPPPMTICSYDLETSGLSTTDDFIFQASMIFSRLGDSVGKNASDAGRHAV
DACADGVVICVGATESIDGTPILVVENEMQLLDTFRRILIERGCNVLCGY
NTFKFDSQFLYKRAEKYSFEGFKNLSFIKDLKCDLEVKTLQSAALGKNEL
KQMIIPGRVEIDLFMVMRRSQKLHSYKLNAVCEKFFGGTKDDVTYKDILE
ACTTKDPRKLGVIAKYCYQDSGLVLQLLDKIKEVYDATEMAKLCAVPLTY
IVGRGQQIKCLSLILNRTHGEFVCNYTPEKRVEVDGKQVPKDGYKGASVI
DAKKGFYETDPVVTMDFASLYPSIMRLKQLCYTTFVKEDKYRGIDGVVYE
DHEVADGVTATFAHRPGSKSILCEIEEVLGEERRATKKRMKGETDPFAYS
LLDSKQKAQKVTMNSIYGFTGTVNNGMLPLVEIAAAVTSTGRDMIRRTKE
YAERAHGCNVIYGDTDSVMVIFPEHRKIENLRDKMKFCFDMGTRVSKEVT
DLFGYPVLLEFENIYFKYLLVSKKRYAGLSWESVEGPPTMTMKGLVTVRR
DNAPFVGRCASEAIHMLMDVGVADGRARVKEHVTETLLRLERGEVSVEDL
TVRKELKQWVYQHPTPHATLALKIVERAKEQAVFRDLVKGAYETPGGYDD
SALSSAWTKVSNMRTFLSARAKKEVPLKTIIEGIQSENDGPFKAEAYAIP
ALRRLYDDICGVLRSDKNTHTIGLLSAGVSDAHALGERYMAFVRYDVVDW
DPPTLGDRIPYVITTGRGDISSRAEDPRMVRAGRCRPDFLYYINHQLEKP
MVDLLQHVIDSPKTLFVDTRRRVTNGNHGRREITTFFKRIKTC*
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mRNA from alignment at P-littoralis_Contig15:141315..144449-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.52.1 ID=mRNA_P-littoralis_Contig15.52.1|Name=mRNA_P-littoralis_Contig15.52.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3135bp|location=Sequence derived from alignment at P-littoralis_Contig15:141315..144449- (Pylaiella littoralis U1_48)
ATCATGGAGCTCTACCTGCACGACATCCGCGACAACAGCGCGTCCCTCCA GAACCCCACCATGCAGCTCTTTGCGATGGAGGAGGACGGGACGAACGTGT TCGTCAGCGTGAAGAACTTCAGGACGTACCTCTACGTGGGGTTCGACTTC GACATCTCGGATGAGTCCGTGAGGGCGAACTACGTCGAGAGGTTCAGGCA GGAAACGTGGATGAGGAGCGTGCACAAGATGTCCGTCGTCAAGAGGAAGC GCCTGATCGGTTTCTCCGACGGCAAGCTCTTCCCCTTCATCCTCCTGGAG TTCAACGGATCGATACCGTTCTACGTCGTCCGCAAACACCTGGACGTGCT TTCCGGCGAGAGGGAGCCCGCGCCCGGCGACTTCGTTGACCTCGGGAGGT ACCCGGGCATGCACGTGTACGAAGGGAGGGGCGTCGACTCGGTCCTCAAG TTCTTCCACTCCAGCGGTGTCCGGCCGTCGTCGTACTTCCGCATGGAAAA CTACGCCCGGGTCGCCGACCGCGCGAAGAGAACCCACTGCCCGAAGGAGT ACGTGGTCAGCTTCGGCGACCTCTCTCCTCCCCGCGCGCGCGAGCAGGAC AGGAAGCCGCCGCCCATGACCATCTGCTCGTACGACCTGGAAACGTCGGG CCTGAGCACGACCGACGACTTCATCTTCCAGGCGTCGATGATATTCTCCA GGCTCGGCGACAGCGTCGGCAAGAACGCGAGTGACGCCGGCCGCCACGCG GTGGACGCCTGCGCGGACGGCGTCGTCATCTGCGTCGGCGCCACCGAATC GATCGACGGGACGCCGATCTTGGTGGTCGAGAACGAGATGCAGCTGCTCG ACACGTTCCGGCGAATCTTGATCGAGAGGGGGTGCAACGTACTCTGCGGG TACAACACCTTCAAGTTTGATTCGCAGTTCCTGTACAAGCGGGCCGAGAA GTACAGCTTCGAGGGTTTCAAGAACCTAAGCTTCATCAAGGACCTCAAGT GCGACCTCGAGGTGAAGACGCTCCAGAGCGCCGCTCTTGGCAAAAACGAG CTCAAGCAGATGATCATACCCGGGCGCGTCGAGATCGACCTCTTCATGGT GATGCGGCGCTCGCAGAAGCTCCACAGCTACAAGCTGAACGCCGTGTGCG AAAAGTTCTTCGGCGGCACGAAGGACGACGTCACGTACAAGGACATCCTC GAGGCGTGCACGACGAAAGACCCCCGGAAGCTGGGTGTGATCGCCAAGTA CTGCTACCAGGACAGCGGCCTCGTCCTGCAGCTCCTCGACAAGATCAAGG AGGTGTACGACGCGACGGAAATGGCCAAGCTCTGCGCGGTGCCGCTCACC TACATCGTCGGCAGAGGCCAGCAGATTAAGTGCCTGAGCCTCATCCTCAA CCGCACCCACGGGGAGTTCGTCTGCAACTACACCCCGGAGAAGAGAGTCG AGGTCGACGGCAAGCAGGTGCCGAAGGACGGGTACAAGGGGGCGTCCGTC ATCGACGCCAAGAAAGGGTTCTACGAGACCGACCCCGTCGTGACCATGGA CTTCGCGTCGCTGTACCCGAGCATCATGCGCCTGAAACAGCTCTGCTACA CGACTTTCGTCAAGGAGGACAAGTACCGGGGCATCGACGGCGTGGTCTAC GAGGACCACGAGGTCGCCGATGGCGTCACCGCCACGTTCGCGCACCGCCC GGGATCGAAGAGCATCCTGTGCGAGATCGAGGAGGTGCTCGGGGAGGAGC GCAGGGCCACCAAGAAGCGCATGAAGGGCGAGACGGACCCCTTCGCCTAC TCCCTGCTCGATTCGAAGCAGAAGGCCCAGAAGGTCACCATGAATTCCAT CTACGGCTTCACCGGGACCGTCAACAACGGCATGCTTCCCCTCGTGGAGA TCGCGGCCGCCGTGACGTCGACCGGAAGAGACATGATCAGGCGCACCAAG GAGTACGCCGAGCGGGCGCACGGCTGCAACGTCATCTACGGGGACACGGA CTCGGTCATGGTCATCTTCCCGGAACACCGCAAGATAGAAAACCTGCGCG ACAAGATGAAGTTCTGCTTCGACATGGGAACCAGGGTGTCCAAGGAGGTC ACGGACTTGTTCGGGTACCCCGTCCTCCTCGAGTTCGAGAACATCTACTT CAAGTACCTGCTGGTGTCCAAGAAGAGGTACGCCGGGCTCTCCTGGGAAT CCGTCGAGGGACCCCCAACCATGACCATGAAGGGCCTCGTCACCGTCAGG CGCGACAACGCGCCGTTCGTCGGCCGGTGCGCCTCGGAAGCCATCCACAT GCTCATGGACGTGGGCGTCGCGGACGGAAGAGCCCGCGTCAAGGAACACG TGACGGAGACCCTTCTCCGCCTCGAAAGAGGAGAGGTGTCGGTGGAGGAC CTGACGGTCCGGAAAGAGCTCAAGCAGTGGGTGTACCAGCACCCGACGCC GCACGCCACGCTGGCGCTCAAGATCGTCGAGCGCGCCAAGGAGCAGGCGG TGTTCCGCGATCTCGTCAAGGGTGCCTACGAGACGCCGGGCGGCTACGAC GACTCGGCCCTCTCTTCCGCCTGGACCAAGGTCAGCAACATGCGGACCTT CCTCTCGGCGCGCGCAAAGAAGGAGGTGCCCCTGAAAACCATAATCGAGG GCATCCAGAGCGAGAACGACGGCCCCTTCAAGGCCGAGGCCTACGCCATC CCCGCGCTGCGTCGGCTCTACGACGACATCTGCGGCGTGCTGAGGAGCGA CAAGAACACGCACACCATCGGGCTCCTCTCGGCGGGAGTGAGCGACGCCC ACGCGCTCGGGGAGAGGTACATGGCTTTCGTGAGGTACGACGTCGTCGAC TGGGACCCCCCCACCCTGGGCGATAGGATCCCATACGTCATCACGACGGG ACGAGGGGACATCAGCTCGAGGGCCGAAGATCCGCGCATGGTCCGGGCGG GCAGGTGCAGGCCCGACTTCCTCTACTACATCAATCACCAGCTGGAAAAA CCCATGGTCGACCTCCTGCAGCACGTGATCGATTCGCCCAAGACGCTTTT CGTGGACACTCGCAGGAGAGTCACGAACGGCAACCACGGGAGGAGAGAGA TCACCACGTTCTTCAAGAGAATCAAGACCTGCTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:141315..144449-

>mRNA_P-littoralis_Contig15.52.1 ID=mRNA_P-littoralis_Contig15.52.1|Name=mRNA_P-littoralis_Contig15.52.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3132bp|location=Sequence derived from alignment at P-littoralis_Contig15:141315..144449- (Pylaiella littoralis U1_48)
ATGGAGCTCTACCTGCACGACATCCGCGACAACAGCGCGTCCCTCCAGAA
CCCCACCATGCAGCTCTTTGCGATGGAGGAGGACGGGACGAACGTGTTCG
TCAGCGTGAAGAACTTCAGGACGTACCTCTACGTGGGGTTCGACTTCGAC
ATCTCGGATGAGTCCGTGAGGGCGAACTACGTCGAGAGGTTCAGGCAGGA
AACGTGGATGAGGAGCGTGCACAAGATGTCCGTCGTCAAGAGGAAGCGCC
TGATCGGTTTCTCCGACGGCAAGCTCTTCCCCTTCATCCTCCTGGAGTTC
AACGGATCGATACCGTTCTACGTCGTCCGCAAACACCTGGACGTGCTTTC
CGGCGAGAGGGAGCCCGCGCCCGGCGACTTCGTTGACCTCGGGAGGTACC
CGGGCATGCACGTGTACGAAGGGAGGGGCGTCGACTCGGTCCTCAAGTTC
TTCCACTCCAGCGGTGTCCGGCCGTCGTCGTACTTCCGCATGGAAAACTA
CGCCCGGGTCGCCGACCGCGCGAAGAGAACCCACTGCCCGAAGGAGTACG
TGGTCAGCTTCGGCGACCTCTCTCCTCCCCGCGCGCGCGAGCAGGACAGG
AAGCCGCCGCCCATGACCATCTGCTCGTACGACCTGGAAACGTCGGGCCT
GAGCACGACCGACGACTTCATCTTCCAGGCGTCGATGATATTCTCCAGGC
TCGGCGACAGCGTCGGCAAGAACGCGAGTGACGCCGGCCGCCACGCGGTG
GACGCCTGCGCGGACGGCGTCGTCATCTGCGTCGGCGCCACCGAATCGAT
CGACGGGACGCCGATCTTGGTGGTCGAGAACGAGATGCAGCTGCTCGACA
CGTTCCGGCGAATCTTGATCGAGAGGGGGTGCAACGTACTCTGCGGGTAC
AACACCTTCAAGTTTGATTCGCAGTTCCTGTACAAGCGGGCCGAGAAGTA
CAGCTTCGAGGGTTTCAAGAACCTAAGCTTCATCAAGGACCTCAAGTGCG
ACCTCGAGGTGAAGACGCTCCAGAGCGCCGCTCTTGGCAAAAACGAGCTC
AAGCAGATGATCATACCCGGGCGCGTCGAGATCGACCTCTTCATGGTGAT
GCGGCGCTCGCAGAAGCTCCACAGCTACAAGCTGAACGCCGTGTGCGAAA
AGTTCTTCGGCGGCACGAAGGACGACGTCACGTACAAGGACATCCTCGAG
GCGTGCACGACGAAAGACCCCCGGAAGCTGGGTGTGATCGCCAAGTACTG
CTACCAGGACAGCGGCCTCGTCCTGCAGCTCCTCGACAAGATCAAGGAGG
TGTACGACGCGACGGAAATGGCCAAGCTCTGCGCGGTGCCGCTCACCTAC
ATCGTCGGCAGAGGCCAGCAGATTAAGTGCCTGAGCCTCATCCTCAACCG
CACCCACGGGGAGTTCGTCTGCAACTACACCCCGGAGAAGAGAGTCGAGG
TCGACGGCAAGCAGGTGCCGAAGGACGGGTACAAGGGGGCGTCCGTCATC
GACGCCAAGAAAGGGTTCTACGAGACCGACCCCGTCGTGACCATGGACTT
CGCGTCGCTGTACCCGAGCATCATGCGCCTGAAACAGCTCTGCTACACGA
CTTTCGTCAAGGAGGACAAGTACCGGGGCATCGACGGCGTGGTCTACGAG
GACCACGAGGTCGCCGATGGCGTCACCGCCACGTTCGCGCACCGCCCGGG
ATCGAAGAGCATCCTGTGCGAGATCGAGGAGGTGCTCGGGGAGGAGCGCA
GGGCCACCAAGAAGCGCATGAAGGGCGAGACGGACCCCTTCGCCTACTCC
CTGCTCGATTCGAAGCAGAAGGCCCAGAAGGTCACCATGAATTCCATCTA
CGGCTTCACCGGGACCGTCAACAACGGCATGCTTCCCCTCGTGGAGATCG
CGGCCGCCGTGACGTCGACCGGAAGAGACATGATCAGGCGCACCAAGGAG
TACGCCGAGCGGGCGCACGGCTGCAACGTCATCTACGGGGACACGGACTC
GGTCATGGTCATCTTCCCGGAACACCGCAAGATAGAAAACCTGCGCGACA
AGATGAAGTTCTGCTTCGACATGGGAACCAGGGTGTCCAAGGAGGTCACG
GACTTGTTCGGGTACCCCGTCCTCCTCGAGTTCGAGAACATCTACTTCAA
GTACCTGCTGGTGTCCAAGAAGAGGTACGCCGGGCTCTCCTGGGAATCCG
TCGAGGGACCCCCAACCATGACCATGAAGGGCCTCGTCACCGTCAGGCGC
GACAACGCGCCGTTCGTCGGCCGGTGCGCCTCGGAAGCCATCCACATGCT
CATGGACGTGGGCGTCGCGGACGGAAGAGCCCGCGTCAAGGAACACGTGA
CGGAGACCCTTCTCCGCCTCGAAAGAGGAGAGGTGTCGGTGGAGGACCTG
ACGGTCCGGAAAGAGCTCAAGCAGTGGGTGTACCAGCACCCGACGCCGCA
CGCCACGCTGGCGCTCAAGATCGTCGAGCGCGCCAAGGAGCAGGCGGTGT
TCCGCGATCTCGTCAAGGGTGCCTACGAGACGCCGGGCGGCTACGACGAC
TCGGCCCTCTCTTCCGCCTGGACCAAGGTCAGCAACATGCGGACCTTCCT
CTCGGCGCGCGCAAAGAAGGAGGTGCCCCTGAAAACCATAATCGAGGGCA
TCCAGAGCGAGAACGACGGCCCCTTCAAGGCCGAGGCCTACGCCATCCCC
GCGCTGCGTCGGCTCTACGACGACATCTGCGGCGTGCTGAGGAGCGACAA
GAACACGCACACCATCGGGCTCCTCTCGGCGGGAGTGAGCGACGCCCACG
CGCTCGGGGAGAGGTACATGGCTTTCGTGAGGTACGACGTCGTCGACTGG
GACCCCCCCACCCTGGGCGATAGGATCCCATACGTCATCACGACGGGACG
AGGGGACATCAGCTCGAGGGCCGAAGATCCGCGCATGGTCCGGGCGGGCA
GGTGCAGGCCCGACTTCCTCTACTACATCAATCACCAGCTGGAAAAACCC
ATGGTCGACCTCCTGCAGCACGTGATCGATTCGCCCAAGACGCTTTTCGT
GGACACTCGCAGGAGAGTCACGAACGGCAACCACGGGAGGAGAGAGATCA
CCACGTTCTTCAAGAGAATCAAGACCTGCTGA
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