prot_P-littoralis_Contig15.44.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.44.1
Unique Nameprot_P-littoralis_Contig15.44.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
BLAST of mRNA_P-littoralis_Contig15.44.1 vs. uniprot
Match: Q8QNH0_ESV1K (EsV-1-108 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNH0_ESV1K)

HSP 1 Score: 237 bits (605), Expect = 7.400e-76
Identity = 129/225 (57.33%), Postives = 160/225 (71.11%), Query Frame = 0
Query:    5 YRCASIDIGVVNLALCVTEFTELGDGKFRFNVTHLERASIGSPSETMHVLGRKLVKFYAGNKALAGRSFDFVFIEQQLSRAVKNYVLSYVTLSYFETVNVTVDRPDRPAAAAAVVFVSPKNKFRAVRHAFPEAALRSIDFERRGRGLKKLSVEIARLLFDAFAVDVGLKALREYGSKLDDISDVFLQSFAFFLNK---KVSRDREAPWFISVEEHAEGKDPEEQA 226
            YRCASIDIGVVNLA CVTEF    DG F F++ H++R  IG+  ETMH LG+KL+ F++ + AL     D+VFIEQQLSRAVKN VLSY+T++YFET  +        +    + FVSPK KF AVR+AFPE  L SI+FERRGR LKKL+VE+ARLLF  F V VGL A+ +YG+KLDD+SD FLQSFAFFL K   +++       F+ VEE+ E KD +EQA
Sbjct:    8 YRCASIDIGVVNLAFCVTEFVSRIDGTFDFDLVHVQRVKIGNTRETMHDLGKKLLSFFSASDALRHEKLDYVFIEQQLSRAVKNIVLSYITMAYFETKRIGC------SDGTKISFVSPKKKFAAVRYAFPENVLSSINFERRGRELKKLTVEVARLLFTEFDVKVGLDAVTKYGTKLDDVSDAFLQSFAFFLEKFPSELAARGGRSSFVGVEENRESKDADEQA 226          
BLAST of mRNA_P-littoralis_Contig15.44.1 vs. uniprot
Match: D8LPD8_ECTSI (EsV-1-108 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPD8_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 2.990e-75
Identity = 130/226 (57.52%), Postives = 158/226 (69.91%), Query Frame = 0
Query:    4 TYRCASIDIGVVNLALCVTEFTELGDGKFRFNVTHLERASIGSPSETMHVLGRKLVKFYAGNKALAGRSFDFVFIEQQLSRAVKNYVLSYVTLSYFETVNVTVDRPDRPAAAAAVVFVSPKNKFRAVRHAFPEAALRSIDFERRGRGLKKLSVEIARLLFDAFAVDVGLKALREYGSKLDDISDVFLQSFAFFLNK---KVSRDREAPWFISVEEHAEGKDPEEQA 226
            TYRCASIDIGV+NLA CVTEF    DG F F++ H +R  IG+  ET+  LGRKL+ F + + AL     D+VFIEQQLSRAVKN VLSY+T++YFET  +          +  +VFVSPKNKF AVR+AFP+  L SI+FERRGR LKKL+VE+ARLLF AF V VGL A+   G+KLDD+SD FLQSFAFFL K    ++       FI VEE+ E KD +EQA
Sbjct:    7 TYRCASIDIGVINLAFCVTEFVSRTDGSFDFDLLHAQRVKIGNTRETIRDLGRKLLSFLSASDALRHDKLDYVFIEQQLSRAVKNIVLSYITMAYFETKRIGC------GDSTKIVFVSPKNKFAAVRYAFPKGVLSSINFERRGRELKKLTVEVARLLFTAFGVKVGLDAMATNGTKLDDVSDAFLQSFAFFLEKFPSNLAARGVGSSFIRVEENRESKDADEQA 226          
BLAST of mRNA_P-littoralis_Contig15.44.1 vs. uniprot
Match: B5LWC2_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC2_9PHYC)

HSP 1 Score: 157 bits (398), Expect = 8.370e-45
Identity = 88/201 (43.78%), Postives = 124/201 (61.69%), Query Frame = 0
Query:    6 RCASIDIGVVNLALCVTEFTELGDGKFRFNVTHLERASIGSPSETMHVLGRKLVKFYAGNKALAGRSFDFVFIEQQLSRAVKNYVLSYVTLSYFETVNVTVDRPDRPAAAAAVVFVSPKNKFRAVRHAFPEAA-LRSIDFERRG-RGLKKLSVEIARLLFDAFAVDVGLKALREYGSKLDDISDVFLQSFAFFL-NKKVSR 203
            R  SID+G+VNLA C+ +F EL  G FRF++ H+E+  +G+  ++ H L + ++ F+   + +  R  D + IEQQ++RA+KN +L+Y  +SYF T        +    AA   FV P  KF+A R AF  +  LR I+F   G R LK+LSVE+A+ +F  F V  GL+ + EY  KLDD+ DVFLQSFAFFL  KK  R
Sbjct:    4 RVLSIDVGIVNLAYCIIDFEELAPGAFRFDLVHVEKGQVGTVRQSTHQLAKNVIHFFKKAEPIQRRKVDVILIEQQMTRAIKNSILAYTIMSYFYT--------NEETGAAQTCFVQPWKKFQATRIAFENSGCLRGINFNVCGSRELKRLSVEVAKQIFAEFQVLEGLRVIEEYKPKLDDVCDVFLQSFAFFLLGKKTGR 196          
BLAST of mRNA_P-littoralis_Contig15.44.1 vs. uniprot
Match: Q6XM10_9PHYC (FirrV-1-B26 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM10_9PHYC)

HSP 1 Score: 130 bits (328), Expect = 2.550e-34
Identity = 80/198 (40.40%), Postives = 121/198 (61.11%), Query Frame = 0
Query:    3 TTYRCASIDIGVVNLALCVTEFTEL-GDGKFRFNVTHLERASIGSPSETMHVLGRKLVKFYAGNKALAGRSFDFVFIEQQLSRAVKNYVLSYVTLSYFETVNVTVDRPDRPAAAAAVVFVSPKNKFRAVRHAFPE-AALRSIDFERRG-RGLKKLSVEIARLLFDAFAVDVGLKALREYGSKLDDISDVFLQSFAFFL 197
            T  R  S+DIG++N+A C+ +F E  G  ++ F++ H+E+ SIG+  ++M+ L   ++ F    + +  ++ D V IE+QL RA+KN VLS+V ++Y   V+V      R        FV    KF AV++ F + A ++ +DF++RG R LK+LSVE+A  LF  F    GL+A+ EY  K+DDI DVFLQSF  FL
Sbjct:    4 TITRVLSVDIGIINMAYCIIDFWEKPGSAEYEFSLVHIEKRSIGTIRQSMYELMINVIAFLNEAEPIHAKTIDVVLIEKQLPRAIKNVVLSFVVMTY---VHVRCTNDAR--------FVQSWKKFDAVKYVFQKFACVQQVDFKKRGSRPLKQLSVELATRLFAEFQCLEGLRAIEEYRPKIDDICDVFLQSFTVFL 190          
BLAST of mRNA_P-littoralis_Contig15.44.1 vs. uniprot
Match: A0A835YWP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.940e-7
Identity = 60/193 (31.09%), Postives = 97/193 (50.26%), Query Frame = 0
Query:    7 CASIDIGVVNLALCVTEFTELGDGKFRFNVTHLERASIG-SPSETMH-VLGRKLVKFYAGNKALAGRSFDFVFIEQQLSR-AVKNYVLSYVTLSYFETVNVTVDRPDRPAAAAAVVFVSPKNKFRAVRH-AFPEAALRSIDFER-RGR-GLKKLSVEIARLLFDAFAVDVGLKALREYGSKLDDISDVFLQSF 193
            C +ID+G++NLA+CVTE  ++G       V   E+ +IG    E ++ VL   +    A   A    +   V IEQQ +R AVKN+ ++    + +              A   V FVSP+ KF+ +   A  + +L  +DF R +GR  +K+  +++A+ L   +  +V L+AL    +KLDDI D    +F
Sbjct:    3 CVAIDVGILNLAVCVTE--DVGGVPV---VRACEKFAIGRGQKEPINKVLDLLVALMEARQDAFRPANLTQVVIEQQCARLAVKNFAIASALYALYVK------------AGVPVRFVSPREKFKVLAAVAAADPSLAHLDFSRTKGRKSIKQFGIDLAQALARKWECEVLLQALAS-NAKLDDICDAATMAF 177          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Q8QNH0_ESV1K7.400e-7657.33EsV-1-108 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPD8_ECTSI2.990e-7557.52EsV-1-108 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
B5LWC2_9PHYC8.370e-4543.78Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM10_9PHYC2.550e-3440.40FirrV-1-B26 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A835YWP7_9STRA4.940e-731.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:129328..130008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.44.1mRNA_P-littoralis_Contig15.44.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 129325..130008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.44.1 ID=prot_P-littoralis_Contig15.44.1|Name=mRNA_P-littoralis_Contig15.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MLTTYRCASIDIGVVNLALCVTEFTELGDGKFRFNVTHLERASIGSPSET
MHVLGRKLVKFYAGNKALAGRSFDFVFIEQQLSRAVKNYVLSYVTLSYFE
TVNVTVDRPDRPAAAAAVVFVSPKNKFRAVRHAFPEAALRSIDFERRGRG
LKKLSVEIARLLFDAFAVDVGLKALREYGSKLDDISDVFLQSFAFFLNKK
VSRDREAPWFISVEEHAEGKDPEEQA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf