prot_P-littoralis_Contig15.39.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.39.1
Unique Nameprot_P-littoralis_Contig15.39.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length113
Homology
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BLAST of mRNA_P-littoralis_Contig15.39.1 vs. uniprot
Match: D8LPE1_ECTSI (Hpt domain protein, EsV-1-113 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE1_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.040e-30
Identity = 60/105 (57.14%), Postives = 81/105 (77.14%), Query Frame = 0 
Query:    1 MDKVISIPEAMAMCDNDDDFFEELVEVMREDVLECSTLVASAYANNDPDALRQVAHRVKGQAASMAAKALRDASRKVEDASKNGSCTKTEYLQLMSAAQDFLRHT 105
            M+ V+ I E +AMCDND+ F +E+V +MR D++EC +L+A A+ NN+P   R+VAHRVKGQAASMAAK L   S+KVEDA+K G CTKTEYL L+ + ++F+R T
Sbjct:    1 MENVLCIQETVAMCDNDEIFMKEMVVLMRNDIVECLSLLAEAFNNNNPARTREVAHRVKGQAASMAAKDLMLHSKKVEDAAKIGFCTKTEYLSLVLSMKEFVRCT 105
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BLAST of mRNA_P-littoralis_Contig15.39.1 vs. uniprot
Match: Q8QNG6_ESV1K (EsV-1-113 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNG6_ESV1K)

HSP 1 Score: 107 bits (267), Expect = 5.350e-28
Identity = 55/105 (52.38%), Postives = 80/105 (76.19%), Query Frame = 0 
Query:    1 MDKVISIPEAMAMCDNDDDFFEELVEVMREDVLECSTLVASAYANNDPDALRQVAHRVKGQAASMAAKALRDASRKVEDASKNGSCTKTEYLQLMSAAQDFLRHT 105
            M+KV+ +  A+ MCDND++F +E+V +MR+D+++C +L+A A+ +ND    R+VAHRVKGQAA +AAK L   S+KVEDA+K G CTKTEYL L+   ++F+R T
Sbjct:    1 MEKVLCVKGALEMCDNDEEFLKEMVGLMRDDIMKCLSLLAEAFDDNDSSRTREVAHRVKGQAAMLAAKDLLLQSKKVEDAAKIGFCTKTEYLSLVLNMKEFVRCT 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPE1_ECTSI2.040e-3057.14Hpt domain protein, EsV-1-113 n=1 Tax=Ectocarpus s... [more]
Q8QNG6_ESV1K5.350e-2852.38EsV-1-113 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036641HPT domain superfamilyGENE3D1.20.120.160HPT domaincoord: 2..110
e-value: 2.4E-16
score: 62.1
IPR036641HPT domain superfamilySUPERFAMILY47226Histidine-containing phosphotransfer domain, HPT domaincoord: 9..106
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainPFAMPF01627Hptcoord: 23..86
e-value: 1.2E-8
score: 35.1
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainPROSITEPS50894HPTcoord: 17..112
score: 15.577545
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainCDDcd00088HPTcoord: 21..100
e-value: 9.79836E-8
score: 44.2946

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:124898..125236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.39.1mRNA_P-littoralis_Contig15.39.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 124898..125236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.39.1 ID=prot_P-littoralis_Contig15.39.1|Name=mRNA_P-littoralis_Contig15.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp
MDKVISIPEAMAMCDNDDDFFEELVEVMREDVLECSTLVASAYANNDPDA
LRQVAHRVKGQAASMAAKALRDASRKVEDASKNGSCTKTEYLQLMSAAQD
FLRHTAKKKKSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036641HPT_dom_sf
IPR008207Sig_transdc_His_kin_Hpt_dom