prot_P-littoralis_Contig15.35.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.35.1
Unique Nameprot_P-littoralis_Contig15.35.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length194
Homology
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: Q8QNF3_ESV1K (EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K)

HSP 1 Score: 304 bits (779), Expect = 3.690e-103
Identity = 141/194 (72.68%), Postives = 168/194 (86.60%), Query Frame = 0
Query:    1 MPELFFDVETTGLPPRKASPKSFEQYDSCRVVSVAWVLRDAKTVYSQRYAVADPGIPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKKHNS 194
            MPELFFDVETTGLPPRKA+P++FEQYDSCRVVS+AWVLRD KTVYSQRY+V DPGI DE IGAE +HGIS+ V+DRYG   + V+ +FM DV ++D+I+AHNL FD+SV++AELFRMG  ++  RLM   SLCTM+STTNLVRI N+YGS+KWPKLEELH+FLFGHVFENAHHAMCDVDA+V CY+ L +KH S
Sbjct:    1 MPELFFDVETTGLPPRKANPETFEQYDSCRVVSIAWVLRDEKTVYSQRYSVTDPGIADENIGAEFVHGISREVMDRYGNATKVVLSDFMADVDRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFKSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHVFENAHHAMCDVDAMVKCYFTLLEKHTS 194          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: A0A6H5J9I1_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9I1_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.190e-85
Identity = 125/191 (65.45%), Postives = 159/191 (83.25%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSCRVVSVAWVLRDAKTVYSQRYAVADPGIPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKKHNS 194
            + F  +TTGLPPRKA+P++FEQYDSCRVVS+AWVLRD KTVY+QRY+VADPGI DE IGAE +HGIS+ V+D+YG  +  V+ +FM DV ++D+I+AHNL FD+SV++AELFRMG  ++  RL+   SLCTM+STTNLVRI N+  S+KW KLEELH+FLFG+ FENAHHAMCDVDA+V CY+ L +KH +
Sbjct:  426 VVFQCQTTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIGAEFVHGISREVMDKYGNAINVVLSDFMADVNRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLLSFKSLCTMKSTTNLVRIPNSCESYKWLKLEELHEFLFGNAFENAHHAMCDVDAMVKCYFTLLEKHTA 616          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: UPI001408A890 (3'-5' exonuclease n=2 Tax=unclassified Thioalkalivibrio TaxID=2621013 RepID=UPI001408A890)

HSP 1 Score: 130 bits (327), Expect = 1.010e-34
Identity = 78/193 (40.41%), Postives = 112/193 (58.03%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSC-RVVSVAWVLRDAK-TVYSQRYAVADPGIPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGK--ADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDC----DSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRL 188
            LFFDVETTGLP R+ +  ++ + D+  R+VS++W L      V + R A+  P       GAE +HGIS     ++GR + DV+ +   DV      R++AHN+ FD++VL +EL R GR      L+       ++CTM S+ N+ R+   YG +KWP+L+ELH+ LFG  F  AH A  DV A V CY+ L
Sbjct:    3 LFFDVETTGLPTRRHA--TYREVDAWPRIVSISWALAAGPGEVAAHRSAIIRPDGFTIPWGAEQVHGISTATALQFGRPLNDVLRDLAEDVEMHLPFRLVAHNMDFDRNVLFSELVRAGRMPPSPELLRTLGALPTVCTMLSSVNVCRLPGRYGDYKWPRLDELHRHLFGEGFPGAHDAAADVMACVRCYFAL 193          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: A0A6A0IPE7_9BACT (3'-5' exonuclease n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6A0IPE7_9BACT)

HSP 1 Score: 124 bits (311), Expect = 3.160e-32
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSCRVVSVAWVLRD--AKTVYSQRYAVADPG--IPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGS-FKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKK 191
            LFFD ETTG+P R+ +P S E      VV +AW+L D     V  +   +A  G  IP+E   A  +HGI+       G  +  V+  F   V  AD ++AHN++FD  VL AE  R+        L      CTMQ++T+L RI + +GS +KWP L+ELH+FLFG  F+ AH+A  DV A   C++ L ++
Sbjct:    4 LFFDTETTGVPSRRGAPPS-ESASWPHVVQLAWLLADDDGNAVARETRLIAPDGFEIPEE---ATRVHGITTEKAQTDGEPIAVVLHGFALAVAHADLLVAHNISFDLPVLQAEYHRLYGRHGSEILGRTPGFCTMQASTDLCRIPSRFGSGYKWPSLDELHRFLFGEGFDGAHNAGADVTACARCFFELRRR 192          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: K2FS27_9BACT (Exonuclease domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2FS27_9BACT)

HSP 1 Score: 119 bits (299), Expect = 1.480e-30
Identity = 71/190 (37.37%), Postives = 103/190 (54.21%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSC-RVVSVAWVL--RDAKTVYSQRYAVADPGIPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEK 190
            LFFD ET GLP  K         D+  R++ +A+V+   D     S+   +   G       A+ +HG +K ++++ G  +   +  F+ D+  A+ +I HN+ FDKS+L AEL R G +            CTMQS+TN  RI    G +KWPKL+ELHK LFG  FE+AH A+ DV A   C++ L+K
Sbjct:    3 LFFDTETNGLP--KNWGAHVHDVDNWPRMLQLAYVICDDDGDLRMSRNLLIKPEGFEINEDAAK-VHGFTKEILEKKGISIIKALTTFLSDLQDANILIGHNIQFDKSILGAELIRAGMEAGYEDFAKLPRFCTMQSSTNFCRIDGPRG-YKWPKLQELHKHLFGAEFEDAHDALADVSATAKCFFELKK 188          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: A0A2M6Y0G0_9BACT (3'-5' exonuclease n=1 Tax=Elusimicrobia bacterium CG08_land_8_20_14_0_20_59_10 TaxID=2014310 RepID=A0A2M6Y0G0_9BACT)

HSP 1 Score: 118 bits (296), Expect = 3.830e-30
Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 0
Query:    4 LFFDVETTGLPPR-KASPKSFEQYDSCRVVSVAWVLRDA--KTVYSQRYAVADPG--IPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEK 190
            LFFD ETTGLP   KA     + +   R++ +A++L D     +    Y +   G  IP++   A  IHGIS     + G+ + DV+ EF   VG+A+R+IAHN++FD+ ++ AE  R G  +    L     +CTM S+T    +   YG FKWPKLEELH+ LF   F+ AH+A  D+ A V C++ L++
Sbjct:    3 LFFDTETTGLPKNWKAPITDLDNWP--RMIQLAYLLSDGLGNRLAGGDYIIKPVGFTIPED---AAKIHGISTERALKEGKDLGDVLREFQAAVGRAERLIAHNISFDEKIVGAEFLRNGMPDS---LPAKKKICTMHSSTEYCALPGPYG-FKWPKLEELHRKLFRAGFDGAHNAAADIAATVKCFWELKR 185          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: A0A1D2RFX7_9ARCH (DNA polymerase III subunit epsilon n=1 Tax=Candidatus Altiarchaeales archaeon IMC4 TaxID=1878999 RepID=A0A1D2RFX7_9ARCH)

HSP 1 Score: 117 bits (292), Expect = 1.610e-29
Identity = 71/194 (36.60%), Postives = 108/194 (55.67%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSC-RVVSVAWVLRD--AKTVYSQRYAVADPG--IPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYG-SFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKK 191
            L FD ETTGLP    +P   +  D+  R+V +AW++ D   + + SQ   +   G  IP++   A  IHGIS     R G ++   + EF G + +++ ++AHN+ FD+ ++ AE  R G D     L     +CT + +T   R+ N  G  +KWPKL ELH+ LFGH FE+AH AM D  A   C++ L+++
Sbjct:    3 LVFDTETTGLPKNWKAP--IDDLDNWPRLVQIAWLVFDEEGQELSSQCRIIKPQGFEIPED---ATRIHGISTKRASRDGVELNAALDEFSGGINRSEFLVAHNMKFDEMIVGAEFLRQGIDN---CLQGIPKICTQEKSTYFCRLPNPRGYGYKWPKLSELHRTLFGHHFEDAHDAMVDARACAKCFFELKRR 188          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: UPI001EFB5CFC (exonuclease domain-containing protein n=1 Tax=Tenacibaculum finnmarkense TaxID=2781243 RepID=UPI001EFB5CFC)

HSP 1 Score: 117 bits (294), Expect = 2.660e-28
Identity = 71/192 (36.98%), Postives = 105/192 (54.69%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSCRVVSVAWVLRD--AKTVYSQRYAVADPG--IPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKK 191
            LFFD ETTG+P    +P S +  +  R+V +AW+L D     + SQ   +      IP E   A  IHGI+       G+ +  ++ EF   + +A+ +IAHN++FD+ ++ AE FR         L      CTM+ +TN+ +I   YG FKWPKL+ELH FLF   F +AH A  D+ A   CY+ L+++
Sbjct:  167 LFFDTETTGVPRNWKAPAS-DTKNWPRLVQLAWLLYDENGNIIESQNVIIKPDNFIIPKE---ASNIHGITTEKAYADGKDLITILNEFESKIKEANLLIAHNISFDEKIMGAEFFRRNNSNP---LTKVKKFCTMEKSTNICKIDGHYG-FKWPKLQELHYFLFKENFIDAHDAKADIQATAKCYFELKRR 350          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: A0A2N2E2L3_9BACT (3'-5' exonuclease n=1 Tax=Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-2 TaxID=2013769 RepID=A0A2N2E2L3_9BACT)

HSP 1 Score: 110 bits (276), Expect = 3.760e-27
Identity = 69/195 (35.38%), Postives = 105/195 (53.85%), Query Frame = 0
Query:    4 LFFDVETTGLPPRKASPKSFEQYDSCRVVSVAWVLRDAKTVYSQRY--AVADPG--IPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSFKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKK-HN 193
            LFFD ETTGLP    +P S +  +  R+V ++W   D +     RY   +   G  +P+E+     IH I+       G  +  V++EF   V +A  ++ HN+ FD  ++ +E+FR         L     +CTM+S++++ RI N  G +KWP L ELH+FLFG  F  AH+AM DV A   C+Y + ++ HN
Sbjct:    3 LFFDTETTGLPKSYKAPVS-DLNNWPRLVQLSWAWFDNEGNAWDRYDYIIKPVGFEVPEESTR---IHRITHEQAVAEGHDLLTVLMEFNDHVARAKAVVGHNIDFDDKIIGSEMFRNMLPNA---LESAPKICTMKSSSDICRISNGRGGYKWPNLGELHRFLFGKDFAEAHNAMVDVLACARCFYDIRRRGHN 190          
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Match: A0A1F5AZV2_9BACT (Exonuclease domain-containing protein n=1 Tax=Candidatus Aminicenantes bacterium RBG_13_59_9 TaxID=1797268 RepID=A0A1F5AZV2_9BACT)

HSP 1 Score: 107 bits (268), Expect = 8.150e-26
Identity = 73/193 (37.82%), Postives = 103/193 (53.37%), Query Frame = 0
Query:    4 LFFDVETTGLP-PRKASPKSFEQYDSCRVVSVAWVLRDAK-TVYSQRYAVADPG---IPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRI-IAHNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGSF--KWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRL 188
            LFFD ETTGLP  R  SP   E +    +V +AW   D +      R  +  P    IP +   A  IHGI+     R GR + +V+ EF+  V +   + +AHNL +D+ VL  EL R  +     R ++   +CTM+STT L R+    G F  KWP LEELH ++FGH +E AH A  D++A    +++L
Sbjct:    9 LFFDCETTGLPRSRYFSPDDVEGWP--HLVQIAWAHYDLRGNPEDARSHIVKPDGFMIPAD---ATKIHGITHAHALRVGRSLSEVLDEFLEAVERPGTVLVAHNLDYDRGVLGGELVRQRKP---LRFLEIPGICTMKSTTELCRLLRPGGGFGFKWPTLEELHTYVFGHSYEGAHDASSDLEACARSFFKL 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNF3_ESV1K3.690e-10372.68EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K[more]
A0A6H5J9I1_9PHAE3.190e-8565.45Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
UPI001408A8901.010e-3440.413'-5' exonuclease n=2 Tax=unclassified Thioalkaliv... [more]
A0A6A0IPE7_9BACT3.160e-3239.383'-5' exonuclease n=1 Tax=Acidobacteria bacterium ... [more]
K2FS27_9BACT1.480e-3037.37Exonuclease domain-containing protein n=1 Tax=uncu... [more]
A0A2M6Y0G0_9BACT3.830e-3038.543'-5' exonuclease n=1 Tax=Elusimicrobia bacterium ... [more]
A0A1D2RFX7_9ARCH1.610e-2936.60DNA polymerase III subunit epsilon n=1 Tax=Candida... [more]
UPI001EFB5CFC2.660e-2836.98exonuclease domain-containing protein n=1 Tax=Tena... [more]
A0A2N2E2L3_9BACT3.760e-2735.383'-5' exonuclease n=1 Tax=Candidatus Falkowbacteri... [more]
A0A1F5AZV2_9BACT8.150e-2637.82Exonuclease domain-containing protein n=1 Tax=Cand... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 2..194
e-value: 0.0025
score: 8.9
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 4..183
e-value: 2.7E-6
score: 28.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..193
e-value: 2.0E-26
score: 94.9
NoneNo IPR availableCDDcd06127DEDDhcoord: 4..185
e-value: 1.83866E-26
score: 96.986
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:114305..114886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.35.1mRNA_P-littoralis_Contig15.35.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 114305..114886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.35.1 ID=prot_P-littoralis_Contig15.35.1|Name=mRNA_P-littoralis_Contig15.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp
MPELFFDVETTGLPPRKASPKSFEQYDSCRVVSVAWVLRDAKTVYSQRYA
VADPGIPDETIGAECIHGISKHVIDRYGRKVEDVVLEFMGDVGKADRIIA
HNLAFDKSVLAAELFRMGRDEEGARLMDCDSLCTMQSTTNLVRIKNAYGS
FKWPKLEELHKFLFGHVFENAHHAMCDVDALVACYYRLEKKHNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf