mRNA_P-littoralis_Contig15.31.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.31.1
Unique NamemRNA_P-littoralis_Contig15.31.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: D8LPF8_ECTSI (Proliferating cell nuclear antigen n=2 Tax=root TaxID=1 RepID=D8LPF8_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 1.150e-170
Identity = 239/281 (85.05%), Postives = 264/281 (93.95%), Query Frame = 1
Query:    1 MGADAPMDAMAVHIGPKKQPCHRGRPLILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNWKHSEKGENIEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQADQS 843
            MGADAPMDA+ VHI P +QP ++GRPL+L+MQTSQC+QFKSLIECLKEL+CEVNMDFIEGKGIRL+SID GR+AM+HLVVNNIESFYAKGTVTAG++VVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIEL +SERRTKTV SIKLLDLDAEDI IPQVEFDRVVSMPSSELSKHVREMV +S FI+IRAT TTLEL+SEGEMA+SHITIEPTASGLNWKHSEKGE+IEG YFA+YIEKFTK SLA NV++FLK NYPLI+RFE+SIGC+RFCIAPIQ  QS
Sbjct:    1 MGADAPMDAIPVHISPTEQPSYKGRPLVLMMQTSQCLQFKSLIECLKELLCEVNMDFIEGKGIRLVSIDPGRVAMIHLVVNNIESFYAKGTVTAGLNVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELSNSERRTKTVTSIKLLDLDAEDIIIPQVEFDRVVSMPSSELSKHVREMVTVSPFISIRATQTTLELVSEGEMAKSHITIEPTASGLNWKHSEKGEDIEGKYFARYIEKFTKNSLAINVELFLKANYPLILRFEISIGCLRFCIAPIQDGQS 281          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: B5LWG9_9PHYC (Putative PCNA n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG9_9PHYC)

HSP 1 Score: 357 bits (916), Expect = 2.810e-121
Identity = 176/275 (64.00%), Postives = 225/275 (81.82%), Query Frame = 1
Query:    7 ADAPMDAMAVHIGPKKQPCHRGRPLILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNWKHSEKGENIEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQ 831
            A+   D ++V   P +QP H  R LI LM+TSQC QFKSL ECLKEL+ +VNM+FIE KGIRL+SID GR+AMVHLVVN++E FY KGTVTAG+++  LY+MIRS++S D+MEWRIYED PH M IEL +S+RRT+TV+S+KLLDLD  +I+IP VE+DRVVSMPSSELSKHVREMV +S+F+T+R T +TLE I+EGEMA SHITI PTASGLNWK SE   +IEG +  +Y+EKF +  +  NV++FLKT++PLI+R+E+SIG +RF IAP++
Sbjct:   12 AETMEDTLSVK-NPVQQPMHEDRKLIFLMRTSQCAQFKSLCECLKELLTDVNMEFIENKGIRLVSIDPGRVAMVHLVVNSVEYFYVKGTVTAGMNMAFLYRMIRSLSSGDYMEWRIYEDNPHAMNIELYNSDRRTRTVSSMKLLDLDEVEISIPNVEYDRVVSMPSSELSKHVREMVAVSNFVTVRGTRSTLEFIAEGEMASSHITIHPTASGLNWKFSEDVGDIEGKFVVRYLEKFGRVGVEANVELFLKTDFPLILRYELSIGTLRFVIAPVK 285          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: Q6XM81_9PHYC (FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM81_9PHYC)

HSP 1 Score: 333 bits (854), Expect = 3.990e-112
Identity = 159/262 (60.69%), Postives = 218/262 (83.21%), Query Frame = 1
Query:   49 KKQPCHRGRPLILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNWKHSEKGEN-IEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQ 831
            ++QP   GR LI L++TSQ  QFK+L ECLKEL+ +VN++FI+ KGIRL+SID GR+AMVHLV+N++E FYA+GTVTAG+++  LY+MIR +TS D MEWR++ED+PH M IEL +++RRT+TV+SIKLLDLD  DI+IP+VE+DR+VSMPSSELSKHVREM+ +S+++T+R T TTL+ I+EG+MA SHITI PTASGLNWK+S+     IEG +  +Y+EKF +  +  NV++FLK N+PLI+R+E++IG +RF IAP++
Sbjct:    5 QEQPTCDGRKLIALLRTSQSTQFKNLCECLKELLTDVNLEFIQDKGIRLVSIDPGRVAMVHLVINSVEYFYAQGTVTAGLNMSFLYRMIRCLTSGDSMEWRVFEDDPHTMHIELYNNDRRTRTVSSIKLLDLDEVDISIPEVEYDRIVSMPSSELSKHVREMIAVSNYVTVRTTKTTLQFIAEGDMATSHITIHPTASGLNWKYSDDVVGTIEGKFVVRYLEKFGRVGVEANVELFLKKNFPLILRYELTIGTLRFVIAPVK 266          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A836CHQ2_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ2_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.450e-54
Identity = 105/262 (40.08%), Postives = 172/262 (65.65%), Query Frame = 1
Query:   82 ILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFM-EWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNW------KHSEKGEN--IEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQADQ 840
            IL M++SQ  Q++ L++ LK+LI E  + F +  G++LIS+D  ++A++HL   + E +Y K  +T G+++  LYKM+R++T+  +M E+ +   E   + I+L++S++RT T N +KLL L  E + IP   F RV+S+PS++L +HVRE+  LS+ I I++T   L L +EG M  S I I PTASG++W      + SE G +  +EG YF+K++E+F++  L    +IF+K NYPL++R+ +S   +R  IAP+Q D+
Sbjct:   36 ILCMRSSQTSQWRLLVDFLKDLITECPISFSQD-GMKLISLDPIKVALLHLQAKS-EFYYCKSEITVGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRP-LDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQEDE 294          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A835Z7L8_9STRA (Proliferating cell nuclear antigen n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L8_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.690e-52
Identity = 101/254 (39.76%), Postives = 166/254 (65.35%), Query Frame = 1
Query:  106 CVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFM-EWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNW------KHSEKGEN--IEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQADQ 840
            C Q++ L++ LK+LI E  + F +  G++LIS+D  ++A++HL   + E +Y K  +T G+++  LYKM+R++T+  +M E+ +   E   + I+L++S++RT T N +KLL L  E + IP   F RV+S+PS++L +HVRE+  LS+ I I++T   L L +EG M  S I I PTASG++W      + SE G +  +EG YF+K++E+F++  L    +IF+K NYPL++R+ +S   +R  IAP+Q D+
Sbjct:   46 CSQWRLLVDFLKDLITECPISFNQD-GMKLISLDPIKVALLHLQAKS-EFYYCKSEITIGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRP-LDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQEDE 296          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A835Z117_9STRA (Proliferating cell nuclear antigen n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z117_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.780e-48
Identity = 97/263 (36.88%), Postives = 165/263 (62.74%), Query Frame = 1
Query:   82 ILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFM-EWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNWKH------SEKGENIEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQADQSRG 849
            ++ M+T    Q+++LI+ LK+LI E  + F    G++LIS+D   +A+++L V + E +Y K   T G++V  LY+M+R++T+  ++ E  + E +P  + I + + E+RT+T N +KLL L  E ITIP   F RV+S+PS++  +++RE+  +S+ I+IR+T   L L + G M  + I + PTASG++W+H       E+ E +EG Y AKY+E+F++  L   V+IF++  YPL++R+ MS   +R  IA    ++  G
Sbjct:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTF-GASGMKLISMDPAHVALINLQVCS-EFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRP-LDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEGGG 308          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A835YX88_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX88_9STRA)

HSP 1 Score: 166 bits (420), Expect = 8.030e-46
Identity = 98/285 (34.39%), Postives = 171/285 (60.00%), Query Frame = 1
Query:    7 ADAPMDAMAVHIGPKKQPCHRGRPLILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDF-MEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNWKHSEK---GENIEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQADQSRG 849
            A A  DA A    P  +    G  +++ M+T    Q+++L + LK+LI E  + F    G++L+S+D   +A+V+L + + E +Y K  +T G++V  LYKM+R++T+  + +E  + ED+P  + + + + ++RT+T N  KLL L  E ITIP   F RV+S+PS++  +++RE+  +S+ I IR+T   L L +EG    + I I PTASG++W+  +     E +EG ++++Y+E+F +  L   V+IF+K  YPL++R+++    +R  IA    D + G
Sbjct:   44 APAGEDAAAAVACPTDEAVPEG--ILVCMRTHHTQQWRTLTDALKDLISESPVTFGPA-GMKLVSMDPAHVALVNLQIQS-EHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARP-LDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDDAGG 323          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A835Z2Q5_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q5_9STRA)

HSP 1 Score: 154 bits (390), Expect = 6.220e-42
Identity = 87/256 (33.98%), Postives = 165/256 (64.45%), Query Frame = 1
Query:   82 ILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVVLYKMIRSMTSNDF-MEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNW--KHSEK-GENIEGTYFAKYIEKFTKTSLAHNVDIFLKTNYPLIMRFEMSIGCIRFCIAPIQAD 837
            IL+M+++Q  Q++S+ + +K++  EV   F + +G+ +I++D  +IA++ +     E +Y K  +  GI+V VLY+++R++TS  + +E  ++++E   + +++ + ++R+   N IKLL L  E ITIP   FDRV+S+PSS+L +++RE+  LS  IT+ +T   L L ++G +  S IT+ PT+SG+++  K +EK  E +   ++++Y+EK  +  +  + ++FLK  YPL++R+ ++   IR  IAP+  D
Sbjct:   26 ILMMRSTQTSQWRSIFDFVKDVTTEVPFKF-DTEGLSIITLDPLKIALISVRAVT-EFYYCKAPLNVGINVTVLYRLLRNLTSAGYVLEISMFQNETDVIHVQITNRDKRSVVRNKIKLLRLPDEVITIPSTTFDRVLSIPSSDLQRYIRELSSLSSKITVSSTRDELTLSAQGALGSSEITVRPTSSGVHFLFKDTEKHDEVVSARFYSRYLEKLCRP-IDSSTEVFLKKGYPLVLRYNLATATIRVVIAPVNDD 278          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A6C0LE56_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LE56_9ZZZZ)

HSP 1 Score: 147 bits (371), Expect = 2.200e-39
Identity = 78/254 (30.71%), Postives = 158/254 (62.20%), Query Frame = 1
Query:   82 ILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVV--NNIESFYAKGTVTAGISVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITI-EPTASGLNWKHSEKGENIEGTYFAKYIEKFTK-TSLAHNVDIFLKTNYPLIMRFEMS-IGCIRFCIAPI 828
            I+ ++T Q    + L E LK+++ +VN+     +G+++IS+D  + A+V+L +  N  E FY K ++ AG+++  LYK+I+S+ ++D + + I      +++IE+ + E++T  +  +KLLD+D + + IP +EFD V +MPS++   ++RE+ ++++ +T+ +   T  L  EG+ A + I + +     +  +H     +  GT++ KY+  FTK T+L   V+I+LK  +PLI+ + ++ +G +++C+AP+
Sbjct:    7 IVEIKTVQSNAIRILFEALKDILTDVNLQISSSEGLKIISMDGSKQAVVNLKLEANKFEKFYCKNSMRAGLNMTSLYKIIKSVKNSDIITFYILAGSSTKLQIEIENKEKKTNILTVLKLLDIDEDILDIPNIEFDTVKTMPSNDFQSYIRELSIITNKVTLESKNNTFSLSGEGDFAETKINVGDSNTIDIKTEH-----HAMGTFYIKYLLLFTKSTNLCTTVEIYLKNKFPLILVYNVANLGKLQYCLAPL 255          
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Match: A0A6C0K8R3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0K8R3_9ZZZZ)

HSP 1 Score: 147 bits (371), Expect = 2.650e-39
Identity = 82/254 (32.28%), Postives = 158/254 (62.20%), Query Frame = 1
Query:   79 LILLMQTSQCVQFKSLIECLKELICEVNMDFIEGKGIRLISIDRGRIAMVHLVV--NNIESFYAK-GTVTAGISVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDAEDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEGEMARSHITIEPTASGLNWKHSEKGENIEGTYFAKYIEKFTK-TSLAHNVDIFLKTNYPLIMRFEM-SIGCIRFCIAP 825
            +++   T Q    K L E +KE++ +VNM F +  G+++ ++D  + A VH+ +  +  E F      V AG++++ L+K+I+++ S+D +++ IY+++P+ + I   +S + T T + +KLLD++ +  +IP VEFD  ++MPS +  K+ R++ + S  I IR+    LELI++G+ A  H+ I  ++   N   ++  E +EG Y  KY+  FTK T+L++ V+++L   YPLI+ + + ++G +++C+AP
Sbjct:    9 ILVSFHTVQGTTIKGLFESMKEILNDVNMRF-DKTGMKITAMDGNKCACVHIKLEGSKFEHFECNLENVVAGVNMLSLFKLIKTIGSHDTVKFNIYKNKPYELVIMFENSSKNTTTKSVLKLLDINEDIYSIPDVEFDSQINMPSLDFQKYCRDLSIFSEVIKIRSGPAGLELIADGDFASQHVCISQSSDDANMHINKGTEAVEGIYSVKYLNLFTKSTNLSNIVELYLMNEYPLILVYYVGNLGKLQYCLAP 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPF8_ECTSI1.150e-17085.05Proliferating cell nuclear antigen n=2 Tax=root Ta... [more]
B5LWG9_9PHYC2.810e-12164.00Putative PCNA n=1 Tax=Feldmannia species virus Tax... [more]
Q6XM81_9PHYC3.990e-11260.69FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a ... [more]
A0A836CHQ2_9STRA1.450e-5440.08Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z7L8_9STRA2.690e-5239.76Proliferating cell nuclear antigen n=2 Tax=Tribone... [more]
A0A835Z117_9STRA3.780e-4836.88Proliferating cell nuclear antigen n=3 Tax=Tribone... [more]
A0A835YX88_9STRA8.030e-4634.39Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z2Q5_9STRA6.220e-4233.98Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A6C0LE56_9ZZZZ2.200e-3930.71Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0K8R3_9ZZZZ2.650e-3932.28Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:109208..110059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPF8
Preferred namePCNA
PFAMsPCNA_C,PCNA_N
Model size852
Max annot lvl2759|Eukaryota
KEGG koko:K04802
KEGG Pathwayko03030,ko03410,ko03420,ko03430,ko04110,ko04530,ko05161,ko05166,map03030,map03410,map03420,map03430,map04110,map04530,map05161,map05166
KEGG ModuleM00295
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000077,GO:0000082,GO:0000083,GO:0000228,GO:0000278,GO:0000280,GO:0000700,GO:0000701,GO:0000710,GO:0000723,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003684,GO:0003690,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005663,GO:0005694,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006273,GO:0006275,GO:0006281,GO:0006282,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010948,GO:0015630,GO:0016043,GO:0016070,GO:0016458,GO:0016567,GO:0016604,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019985,GO:0022402,GO:0022414,GO:0022616,GO:0023052,GO:0030154,GO:0030234,GO:0030330,GO:0030337,GO:0030466,GO:0030855,GO:0030894,GO:0030971,GO:0030983,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031570,GO:0031571,GO:0031974,GO:0031981,GO:0032069,GO:0032070,GO:0032075,GO:0032077,GO:0032135,GO:0032139,GO:0032200,GO:0032201,GO:0032268,GO:0032270,GO:0032404,GO:0032405,GO:0032446,GO:0032502,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0033683,GO:0034085,GO:0034087,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0035035,GO:0035556,GO:0035753,GO:0035861,GO:0036211,GO:0040029,GO:0042176,GO:0042276,GO:0042592,GO:0042769,GO:0042770,GO:0042802,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043570,GO:0043596,GO:0043626,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044786,GO:0044796,GO:0044819,GO:0044843,GO:0044877,GO:0045005,GO:0045732,GO:0045739,GO:0045740,GO:0045786,GO:0045787,GO:0045814,GO:0045892,GO:0045930,GO:0045934,GO:0045935,GO:0046483,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051321,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051606,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060429,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070182,GO:0070557,GO:0070647,GO:0070914,GO:0070987,GO:0071156,GO:0071158,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090304,GO:0090305,GO:0090329,GO:0090734,GO:0097159,GO:0098772,GO:0098813,GO:0104004,GO:0140014,GO:0140097,GO:1900262,GO:1900264,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902296,GO:1902319,GO:1902392,GO:1902394,GO:1902400,GO:1902402,GO:1902403,GO:1902679,GO:1902806,GO:1902807,GO:1902969,GO:1902983,GO:1902990,GO:1903021,GO:1903022,GO:1903046,GO:1903047,GO:1903362,GO:1903364,GO:1903459,GO:1903460,GO:1903506,GO:1903507,GO:1905777,GO:1905779,GO:1990782,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000278,GO:2000573,GO:2001020,GO:2001022,GO:2001141
Exons1
Evalue1.88e-171
EggNOG OGsCOG0592@1|root,KOG1636@2759|Eukaryota
Ec32 ortholog descriptionEsV-1-132 PCNA
Ec32 orthologEc-06_005530.1
DescriptionDNA polymerase processivity factor activity
Cds size852
COG categoryL
BRITEko00000,ko00001,ko00002,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789710.0859456-CDS-P-littoralis_Contig15:109207..1100591680789710.0859456-CDS-P-littoralis_Contig15:109207..110059Pylaiella littoralis U1_48CDSP-littoralis_Contig15 109208..110059 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.31.1prot_P-littoralis_Contig15.31.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 109208..110059 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.31.1

>prot_P-littoralis_Contig15.31.1 ID=prot_P-littoralis_Contig15.31.1|Name=mRNA_P-littoralis_Contig15.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=284bp
MGADAPMDAMAVHIGPKKQPCHRGRPLILLMQTSQCVQFKSLIECLKELI
CEVNMDFIEGKGIRLISIDRGRIAMVHLVVNNIESFYAKGTVTAGISVVV
LYKMIRSMTSNDFMEWRIYEDEPHRMEIELLSSERRTKTVNSIKLLDLDA
EDITIPQVEFDRVVSMPSSELSKHVREMVVLSHFITIRATVTTLELISEG
EMARSHITIEPTASGLNWKHSEKGENIEGTYFAKYIEKFTKTSLAHNVDI
FLKTNYPLIMRFEMSIGCIRFCIAPIQADQSRG*
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mRNA from alignment at P-littoralis_Contig15:109208..110059-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.31.1 ID=mRNA_P-littoralis_Contig15.31.1|Name=mRNA_P-littoralis_Contig15.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=852bp|location=Sequence derived from alignment at P-littoralis_Contig15:109208..110059- (Pylaiella littoralis U1_48)
ATGGGAGCAGACGCACCGATGGATGCCATGGCCGTGCACATCGGCCCCAA GAAGCAACCCTGTCACAGGGGCAGGCCGCTGATTCTCTTGATGCAGACAT CTCAGTGCGTGCAGTTCAAGTCGCTCATCGAGTGCCTAAAGGAGCTGATA TGCGAAGTCAACATGGATTTTATCGAGGGCAAGGGCATCCGTCTCATCTC CATCGATCGCGGGCGCATCGCGATGGTGCACCTGGTCGTCAACAACATCG AGAGTTTCTACGCCAAGGGGACGGTCACGGCCGGCATCAGCGTCGTCGTC CTCTACAAGATGATCCGTTCGATGACGTCCAACGACTTCATGGAGTGGAG AATATACGAAGACGAGCCACATCGAATGGAAATCGAGCTGCTGAGCTCGG AGAGACGCACGAAAACCGTCAACTCCATCAAGCTCCTGGACCTGGACGCC GAGGACATCACCATACCACAGGTGGAATTCGATCGTGTCGTGTCCATGCC GTCGTCCGAGCTGTCCAAGCACGTCCGGGAGATGGTGGTCTTGAGCCATT TCATAACCATCAGGGCCACCGTGACAACACTCGAGCTCATCTCCGAGGGA GAGATGGCGCGGAGTCACATCACCATAGAACCGACCGCGTCCGGTCTCAA CTGGAAACACAGCGAGAAGGGAGAGAACATAGAGGGAACGTACTTTGCCA AGTACATCGAAAAGTTCACGAAAACCTCCTTGGCGCACAACGTCGACATC TTTCTCAAGACGAATTACCCTCTCATCATGAGATTCGAGATGAGCATCGG CTGCATACGGTTCTGTATCGCCCCGATTCAAGCGGACCAGTCGCGCGGCT GA
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:109208..110059-

>mRNA_P-littoralis_Contig15.31.1 ID=mRNA_P-littoralis_Contig15.31.1|Name=mRNA_P-littoralis_Contig15.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=852bp|location=Sequence derived from alignment at P-littoralis_Contig15:109208..110059- (Pylaiella littoralis U1_48)
ATGGGAGCAGACGCACCGATGGATGCCATGGCCGTGCACATCGGCCCCAA
GAAGCAACCCTGTCACAGGGGCAGGCCGCTGATTCTCTTGATGCAGACAT
CTCAGTGCGTGCAGTTCAAGTCGCTCATCGAGTGCCTAAAGGAGCTGATA
TGCGAAGTCAACATGGATTTTATCGAGGGCAAGGGCATCCGTCTCATCTC
CATCGATCGCGGGCGCATCGCGATGGTGCACCTGGTCGTCAACAACATCG
AGAGTTTCTACGCCAAGGGGACGGTCACGGCCGGCATCAGCGTCGTCGTC
CTCTACAAGATGATCCGTTCGATGACGTCCAACGACTTCATGGAGTGGAG
AATATACGAAGACGAGCCACATCGAATGGAAATCGAGCTGCTGAGCTCGG
AGAGACGCACGAAAACCGTCAACTCCATCAAGCTCCTGGACCTGGACGCC
GAGGACATCACCATACCACAGGTGGAATTCGATCGTGTCGTGTCCATGCC
GTCGTCCGAGCTGTCCAAGCACGTCCGGGAGATGGTGGTCTTGAGCCATT
TCATAACCATCAGGGCCACCGTGACAACACTCGAGCTCATCTCCGAGGGA
GAGATGGCGCGGAGTCACATCACCATAGAACCGACCGCGTCCGGTCTCAA
CTGGAAACACAGCGAGAAGGGAGAGAACATAGAGGGAACGTACTTTGCCA
AGTACATCGAAAAGTTCACGAAAACCTCCTTGGCGCACAACGTCGACATC
TTTCTCAAGACGAATTACCCTCTCATCATGAGATTCGAGATGAGCATCGG
CTGCATACGGTTCTGTATCGCCCCGATTCAAGCGGACCAGTCGCGCGGCT
GA
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