prot_P-littoralis_Contig15.25.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.25.1
Unique Nameprot_P-littoralis_Contig15.25.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length190
Homology
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 7.470e-88
Identity = 140/253 (55.34%), Postives = 161/253 (63.64%), Query Frame = 0
Query:    9 VGQGRTS--WVSPNPRANPTDYDKDFPWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRRHDT-----------------------------------------------------------------------VVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLLS 188
            +G+GR +  +VS + + +  DY+ +FPWFWID+ETTGLDTDTNLILEIV+VVTDRDL E+DSMRLVLHHPHSIL+ARSSAWCR+KFCHR EGGNGLF  CH SALSHHEAEYRMWNFFDHYS+D G R+DT                                                                       VVDVSTPLEMVRRWRPD+A ++P RNG+HRAYDDI DSISLMKFFK T L+
Sbjct:   16 IGKGRRNKTFVSRDFKTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKETFLN 268          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: B5LWG6_9PHYC (Putative oligoribonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG6_9PHYC)

HSP 1 Score: 127 bits (320), Expect = 3.980e-33
Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 0
Query:   28 YDKDFPWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYS 128
            YD++ PWFWID+ET+ LD  T+ +LEI IVVTD  L   DS+ +V+HHP +ILM +SS WC++KFC RS GGNGLF DCH S  S  +A + M NFF++YS
Sbjct:   17 YDRNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCKEKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYS 117          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A7M7JVU5_VARDE (Exonuclease domain-containing protein n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JVU5_VARDE)

HSP 1 Score: 100 bits (249), Expect = 1.150e-22
Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   12 GRTSWVSPNPRANPTDYDKDFPWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSM-RLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHY-----------SEDAGRR-------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITL 186
            G  ++ +PN +  P+D D+     WID+E TGLD D + I+EI  VVTD+DL E+  + +++LH P  +L A    WC++     + G +GL   C  S +S  EAE  +  F   +           S  A R+             H  ++DVS+  E+ +RW PD++   P    AHRAY+DIR SI  +++F+ TL
Sbjct:   50 GPMNFNTPNDKIMPSDIDQRI--CWIDMEMTGLDPDRDTIMEISCVVTDKDLNEVARIEQIILHQPEYVLNAMDD-WCKQ-----NHGASGLTEACLKSKISLKEAEDTVLVFLQRHTTPKKVPLGGNSVHADRQFIRRYMPKVYEHLHYRIIDVSSIRELCKRWYPDVSENEPKIKKAHRAYEDIRQSIQQLQYFRKTL 241          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: UPI00035A2ADF (probable oligoribonuclease isoform X1 n=3 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A2ADF)

HSP 1 Score: 98.6 bits (244), Expect = 1.430e-21
Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 0
Query:   36 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSED------------------------AGRRHDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKI 184
            WIDLE TGLD D++ ILEI  +VT+ DL  + +   L++H  + +L      WC ++      G +GL      S +S H+AE ++  F   ++                          A   H  +VDVST  E+ RRW P+L +R+P +N +HRA DDIR+SI  +KF+K+
Sbjct:  116 WIDLEMTGLDVDSDTILEIACIVTEGDLALVAEGPSLIIHQENEVL-ENMGEWCTEQ-----HGKSGLTESVRNSKISLHQAEEQVLEFVKQHTPSGVCPIAGNSVGKDKQFLERYMPRLASHFHYRIVDVSTIKELCRRWYPNLEKRLPSKNLSHRALDDIRESIEELKFYKM 283          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A3P7PK89_9BILA (Exonuclease domain-containing protein n=3 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A3P7PK89_9BILA)

HSP 1 Score: 94.0 bits (232), Expect = 5.770e-21
Identity = 52/149 (34.90%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   36 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRRHDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFK 183
            W+D E TGLD +T  I+E+  VVT+ DL  + D + +V+ HP ++L +  S WC+K F       NGL  +   S +S  +AE   +         A   H   +DVS+  E+ +RW PD+  + P +  AHRA DDI +SI  +++++
Sbjct:   17 WVDCEMTGLDVNTKTIVEVACVVTEADLTVVEDGLNVVISHPENVLQSMDS-WCKKTFA-----ANGLLKEIQASEISLEQAEQEKY-----MPTFASHLHYRTIDVSSIKELAKRWYPDIYAKRPRKAEAHRALDDICESIEELQWYR 154          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A482V8A7_9CUCU (Oligoribonuclease n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482V8A7_9CUCU)

HSP 1 Score: 94.0 bits (232), Expect = 3.000e-20
Identity = 59/175 (33.71%), Postives = 90/175 (51.43%), Query Frame = 0
Query:   36 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSED-----AGRR-------------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKIT 185
            W+D+E TGLD  T+ I+E+  +VTD +L  + +   +V+HHP ++L    S WC+K+         GL   C  S ++ +EAE ++  F   Y  +     AG                     H  ++DVST  E+ RRW P+L R IP +  +HRA  DIR+SI  +K++K T
Sbjct:   61 WVDMEMTGLDIQTDKIMEVACIVTDSNLNIIAEGPNIVIHHPRNVL-DNMSEWCKKQ-----HAKTGLTEACLNSNVTLNEAENKLMAFVTKYVTENVSPLAGNSVYMDRLFLRKYMPRLDEYLHYRIIDVSTIKELCRRWNPNLYRDIPKKEFSHRALADIRESIDELKYYKNT 229          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A1Y1R7A4_9GAMM (Oligoribonuclease n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A1Y1R7A4_9GAMM)

HSP 1 Score: 88.2 bits (217), Expect = 1.540e-18
Identity = 60/173 (34.68%), Postives = 87/173 (50.29%), Query Frame = 0
Query:   36 WIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLV-LHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHY-----------SEDAGRR-------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFK 183
            WIDLE TGL+ DT+ ILE   ++TD +L E+    ++ +H P S+L A    WC K     + G  GL      S +S  EAE +  +F   Y           S    RR             H   +DVST  E+ RRWRPD+   +  + G+H+A DDIR+SI+ M++++
Sbjct:    9 WIDLEMTGLNPDTDRILEFATIITDGELNELAVGPVIAVHQPDSVLNAMDD-WCIK-----THGQTGLTDRVRKSTISEQEAEKQTLDFIRQYVDPRVSPMCGNSIGQDRRFLHRFMRDLHDYFHYRNIDVSTVKELARRWRPDVFNGV-VKAGSHKALDDIRESIAEMRYYR 174          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A0H5R6R7_9EUKA (Exonuclease domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R6R7_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 2.450e-18
Identity = 60/181 (33.15%), Postives = 86/181 (47.51%), Query Frame = 0
Query:   33 PWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRR-------------------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLL 187
            P  WID E TGLD +++ ILEI +V+TD DL  + +   LV+HH   +L A    WC     H  E  +GL      S L+   AE  + +F   ++   G+                          H  ++DVS+  E+ RRW P +  R P +   HRA DDIR+SI  +K++K  LL
Sbjct:   46 PMIWIDCEMTGLDIESDTILEIAVVMTDSDLNRVIEGPDLVIHHSDKVLNAMGE-WC---ITHHGE--SGLTDKVRASTLTMTAAEDEIMSFVTKWATKPGQTPLAGNTVHCDRMFLKKFMPRLDQYMHYRIIDVSSFKEICRRWNPGVFSRAPKKALLHRALDDIRESIEELKYYKAHLL 220          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A0V0R1R0_PSEPJ (Ribonuclease H-like domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R1R0_PSEPJ)

HSP 1 Score: 87.0 bits (214), Expect = 4.780e-18
Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = 0
Query:   33 PWFWIDLETTGLDTDTNLILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHY------------SEDAGRR-------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFK 183
            P  W+DLE TGLD +TN I+EI ++VTD +L++      ++      ++ +  AWC K     + G +GL   C  S +S  +AE ++ +F  +             S    RR             H  ++DVST  E+ RRW P+   + P +   HRA DDI +SI  +KF+K
Sbjct:   10 PIVWVDLEMTGLDHNTNQIMEIAVLVTDGNLEQTIEGPEIIVKAEKQVLEKMDAWCTK-----THGESGLTQKCLESKISIEQAEKQVLDFLKNLNINKFEAQLGGNSVHMDRRFINKYMPQLDDFLHYRIIDVSTIKELARRWYPEEMEKKPVKKLCHRALDDIIESIEELKFYK 180          
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Match: A0A0M3IY33_ANISI (Probable oligoribonuclease (inferred by orthology to a C. elegans protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3IY33_ANISI)

HSP 1 Score: 87.4 bits (215), Expect = 6.220e-18
Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = 0
Query:   36 WIDLETTGLDTDTNLILEIVIVVTDRDLKEM-DSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGNGLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRR-------------------------HDTVVDVSTPLEMVRRWRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLLSC 189
            WID E TGLD + N I+EI  +VT+ DL  + +   LV++ P  +L +  S WC+  F       NGL      S ++   AE ++  F   ++E AG+                          H   VDVST  E+V+RW P     IP +  AHRA DDI++SI  +K++K  +  C
Sbjct:   37 WIDCEMTGLDVNVNRIVEIACIVTEADLSIVSEGPDLVINQPEDVL-SNMSDWCKTTF-----KMNGLTERIRASNINTENAESQVLTFLKRHTE-AGQSVLAGNSVYMDRIFINKYMPNLGAHLHYRTVDVSTVKELVKRWNPLAYTLIPRKKNAHRALDDIKESIEELKWYKANIFKC 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPG5_ECTSI7.470e-8855.34EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI[more]
B5LWG6_9PHYC3.980e-3357.43Putative oligoribonuclease n=1 Tax=Feldmannia spec... [more]
A0A7M7JVU5_VARDE1.150e-2234.00Exonuclease domain-containing protein n=1 Tax=Varr... [more]
UPI00035A2ADF1.430e-2134.48probable oligoribonuclease isoform X1 n=3 Tax=Aply... [more]
A0A3P7PK89_9BILA5.770e-2134.90Exonuclease domain-containing protein n=3 Tax=Gong... [more]
A0A482V8A7_9CUCU3.000e-2033.71Oligoribonuclease n=1 Tax=Asbolus verrucosus TaxID... [more]
A0A1Y1R7A4_9GAMM1.540e-1834.68Oligoribonuclease n=2 Tax=Oceanospirillales TaxID=... [more]
A0A0H5R6R7_9EUKA2.450e-1833.15Exonuclease domain-containing protein (Fragment) n... [more]
A0A0V0R1R0_PSEPJ4.780e-1831.82Ribonuclease H-like domain n=1 Tax=Pseudocohnilemb... [more]
A0A0M3IY33_ANISI6.220e-1832.78Probable oligoribonuclease (inferred by orthology ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 133..188
e-value: 1.2E-9
score: 39.9
coord: 26..132
e-value: 4.5E-22
score: 80.4
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 36..64
e-value: 3.2E-4
score: 21.3
NoneNo IPR availablePIRSRPIRSR000977-2PIRSR000977-2coord: 32..72
e-value: 0.0042
score: 13.6
coord: 164..181
e-value: 310.0
score: -2.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availablePANTHERPTHR11046:SF19SUBFAMILY NOT NAMEDcoord: 122..185
coord: 35..125
IPR022894OligoribonucleasePANTHERPTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 122..185
coord: 35..125
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 30..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:102553..103326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.25.1mRNA_P-littoralis_Contig15.25.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 102553..103326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.25.1 ID=prot_P-littoralis_Contig15.25.1|Name=mRNA_P-littoralis_Contig15.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp
MGTGQGPEVGQGRTSWVSPNPRANPTDYDKDFPWFWIDLETTGLDTDTNL
ILEIVIVVTDRDLKEMDSMRLVLHHPHSILMARSSAWCRKKFCHRSEGGN
GLFGDCHLSALSHHEAEYRMWNFFDHYSEDAGRRHDTVVDVSTPLEMVRR
WRPDLARRIPCRNGAHRAYDDIRDSISLMKFFKITLLSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR022894Oligoribonuclease
IPR012337RNaseH-like_sf