mRNA_P-littoralis_Contig15.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.21.1
Unique NamemRNA_P-littoralis_Contig15.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: D8LPI1_ECTSI (Sulfhydryl oxidase n=2 Tax=root TaxID=1 RepID=D8LPI1_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.100e-81
Identity = 113/182 (62.09%), Postives = 142/182 (78.02%), Query Frame = 1
Query:    1 HNQMNEN-GLCTSTWGSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIEDYIHTRKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKYERFRASCNLDKSEESKGCTEPAEKKVKLKCRLIIEPI-RTRTRWVGWGARSIVAVIISVLL 540
            + +MN+N GLCTSTWG PGWFFLHCVAAGYPV PD +D+ RG ARGHTRR Y++FFK TG VLPCRFCRDSY  F +ETP+E+Y+H+R+ LFEWLFIIHNKVN K+GDKQE DL SVVDKYERFRA C+  K+    GCT+PA    K+ CRL++EP+ R R RW      +++ + +S+++
Sbjct:    6 NEKMNDNNGLCTSTWGPPGWFFLHCVAAGYPVHPDEYDDIRGNARGHTRRGYSSFFKNTGHVLPCRFCRDSYVHFSSETPVEEYLHSRQALFEWLFIIHNKVNDKIGDKQETDLESVVDKYERFRAKCHHQKAT---GCTDPARHNEKMICRLVVEPVNRKRNRWAVLSIMTVLIIFVSIVV 184          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6C0F9B8_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F9B8_9ZZZZ)

HSP 1 Score: 141 bits (356), Expect = 4.130e-39
Identity = 66/138 (47.83%), Postives = 85/138 (61.59%), Query Frame = 1
Query:   16 ENGLCTSTWGSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPI-EDYIHTRKKLFEWLFIIHNKVNAKLGDKQEP-DLASVVDKYERFRASCNLDKSEESKGCTEP 423
             NG+ T  WG PGWFFLHC+  G+PVDP   DE +      TR AY  FF   G +LPC++CR+SY  F+    +    +  R  L EW + +HN+VNAKLGDK E  DL S+ +KYE FRA C  DK++  KGC+ P
Sbjct:    8 HNGMMTKVWGPPGWFFLHCITFGFPVDPTKFDEEKELPENTTRTAYYNFFMNVGDILPCKYCRESYKEFLKHENVGPPDVTNRDSLVEWFWKMHNRVNAKLGDKYEDADLDSIKEKYEEFRARC--DKNKIEKGCSVP 143          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6H5JX91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX91_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 9.590e-34
Identity = 68/124 (54.84%), Postives = 80/124 (64.52%), Query Frame = 1
Query:   61 FLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIEDYIHTRKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKYERFRASCNLDKSEESKGCTEPAEK 432
            FLHCVAAG+PVDPD +D+ RG  RG   + Y +FFK  G VLPCRFCR+SY                  LF WL IIHNKVN K G KQE  L +VVDKYE+FRASC    + ++ GCTEPA+K
Sbjct:  379 FLHCVAAGFPVDPDEYDDIRGNMRGKINKHYMSFFKNAGHVLPCRFCRESYL-----------------LFGWLAIIHNKVNKKNGAKQETSLQAVVDKYEKFRASCQ---NRKALGCTEPAKK 482          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6C0C9Z4_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0C9Z4_9ZZZZ)

HSP 1 Score: 106 bits (264), Expect = 1.000e-24
Identity = 62/148 (41.89%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    1 HNQMNENGLCTSTWGSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITE--TPIEDYIH-TRKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKYERFRASCNLDKSEESKGCTEPAEKK 435
            H+    NGL T  WG  GW F H VA GYP+ P   DE +   + H        FK+ G+VLPCR+CRDSY  FI E  T + D +   R  L  W F IHN VN KLG +        V KYE FRA C+        GC  P + K
Sbjct:    8 HDGQENNGLITKIWGGAGWTFCHSVAFGYPIYPT--DEQKVIYKDH--------FKSIGSVLPCRYCRDSYQKFIAEGETKLNDAVMLNRDTLTRWFFDIHNAVNNKLGVEYGVTYEDHVAKYESFRAKCS---GANLNGCVTPLDYK 142          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6C0DXW2_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DXW2_9ZZZZ)

HSP 1 Score: 93.6 bits (231), Expect = 6.940e-20
Identity = 58/161 (36.02%), Postives = 76/161 (47.20%), Query Frame = 1
Query:    4 NQMNENGLCTSTWGSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIEDYIHT---RKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKYERFRASCNLDKSEESKGCTEPAEKKVKL--KCRLIIEPI 471
            N  + NGL TS WG P W   H +  GYP+ P              +  Y  FF   G VLPC +CR SYA FI E      + T   R+ L +W F +HN+VN KLG         +  K+E +RA C    ++  KGC  P + K K   K ++I  PI
Sbjct:   34 NPDSNNGLITSIWGPPCWETFHSITFGYPIKPTQEQ----------KNDYLNFFVFFGKVLPCSYCRISYAEFIKEPGTFLDMRTMESRETLTKWGFELHNRVNKKLGVNYGETYQEMCYKFESYRAKC----TKTDKGCLMPLDIKAKSYQKAKIIRSPI 180          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6C0ANJ4_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ANJ4_9ZZZZ)

HSP 1 Score: 87.8 bits (216), Expect = 1.670e-18
Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 1
Query:    4 NQMNE-NGLCTSTWGSPGWFFLH-CVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIEDYIHTRKKLFEWLFIIHNKVNAKLGDKQE 330
            N+ N  +GL T +WG PGW+FL  C+   YP   D  ++     + H +   ++   T    +PC +CR+S   FI E P+E ++  R KLFEWL++I NKVN KL ++++
Sbjct:    3 NKYNSLSGLSTKSWGPPGWYFLFSCIMGAYPPQIDNKNKEHQKIKKHFKNMLSSLVYT----MPCVYCRNSLKQFIKELPMEPFLSGRLKLFEWLYLIRNKVNEKLINQEQ 109          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6C0LGK7_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LGK7_9ZZZZ)

HSP 1 Score: 80.9 bits (198), Expect = 1.960e-15
Identity = 46/133 (34.59%), Postives = 65/133 (48.87%), Query Frame = 1
Query:   31 TSTWGSPGWFFLHCVAAGYP--VDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIE--DYIHTRKKLFEWLFIIHNKVNAKLGDKQ--EPDLASVVDKYERFRAS---CNLDKSEE 402
            T  WG P WFFLH +A  YP  ++ D  +  R       R +  +F    G +LPC  C  SY  +I E   E   Y+ +R KL  ++++IH +VN KLG  Q   P    V+ K+ +F      C L K E+
Sbjct:   27 THVWGPPAWFFLHSMAMAYPKKINEDNFEHIR------IRNSMFSFLSNLGNILPCNLCSVSYNGYIKEPSFEISKYLGSRAKLCYFIYLIHERVNRKLGVPQCYRPSFKKVIKKFGKFLVGPDQCKLTKIEQ 153          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6C0JIU9_9ZZZZ (Thiol oxidase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JIU9_9ZZZZ)

HSP 1 Score: 72.4 bits (176), Expect = 1.240e-12
Identity = 45/159 (28.30%), Postives = 74/159 (46.54%), Query Frame = 1
Query:    1 HNQMNENGLCTSTWGSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIE-DYIHTRKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKYERFRASCNLDK--SEESKGCTEPAEKKVKLKCRLIIEP 468
            ++  + +G+ T+ WG   W  LH ++  YP  P   D          +  Y  F      VLPC++CR ++   +   P++   +  R+   ++++ +H  +N  L  K       V ++YE FRA CNL +    + KGCTE    K K KC + I P
Sbjct:    7 NDYKSGDGMLTTVWGPSLWHSLHTISFNYPNQPTDED----------KHNYMNFILQLEYVLPCKYCRMNFKKNLKAVPLKMAQMKNRETFSKFVYNLHEHINKMLKKKSGLTYDMVRERYEHFRARCNLKELVKIKEKGCTESLYGK-KSKCIIKIVP 154          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A6P8LU71_9HYME (Sulfhydryl oxidase n=7 Tax=Apinae TaxID=70987 RepID=A0A6P8LU71_9HYME)

HSP 1 Score: 53.5 bits (127), Expect = 9.360e-6
Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 1
Query:   43 GSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIEDYIHTRKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKY 360
            GS  W FLH +AA YP +P   DE +           + FF T     PC  C +     + +TP +   +++ +L +WL +IHN+VN KLG K E D   V  ++
Sbjct:   56 GSRTWSFLHTMAAYYPDNPT--DEQK--------LDMSKFFHTFSKFYPCYVCAEDLQEQLKKTPPQT--NSQSQLSQWLCMIHNEVNKKLG-KPEFDCKLVDQRW 148          
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Match: A0A835CTF8_9HYME (Sulfhydryl oxidase n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A835CTF8_9HYME)

HSP 1 Score: 53.5 bits (127), Expect = 1.030e-5
Identity = 34/106 (32.08%), Postives = 48/106 (45.28%), Query Frame = 1
Query:   43 GSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTTFFKTTGTVLPCRFCRDSYASFITETPIEDYIHTRKKLFEWLFIIHNKVNAKLGDKQEPDLASVVDKY 360
            G   W FLH +AA YP  P              ++  +TFF       PC  C +     I  TP +    ++ +L +WL +IHN+VN KLG K E D   V  ++
Sbjct:   62 GKSTWSFLHTMAAYYPDKPSVEQ----------KKDMSTFFHIFSKFYPCSICAEDLREQIQVTPPKT--SSQNELSQWLCMIHNEVNKKLG-KSEFDCKLVNQRW 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LPI1_ECTSI1.100e-8162.09Sulfhydryl oxidase n=2 Tax=root TaxID=1 RepID=D8LP... [more]
A0A6C0F9B8_9ZZZZ4.130e-3947.83Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6H5JX91_9PHAE9.590e-3454.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6C0C9Z4_9ZZZZ1.000e-2441.89Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0DXW2_9ZZZZ6.940e-2036.02Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0ANJ4_9ZZZZ1.670e-1837.84Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0LGK7_9ZZZZ1.960e-1534.59Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6C0JIU9_9ZZZZ1.240e-1228.30Thiol oxidase n=1 Tax=viral metagenome TaxID=10705... [more]
A0A6P8LU71_9HYME9.360e-633.96Sulfhydryl oxidase n=7 Tax=Apinae TaxID=70987 RepI... [more]
A0A835CTF8_9HYME1.030e-532.08Sulfhydryl oxidase n=1 Tax=Aphidius gifuensis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:91088..91627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog654926.Q8QNC1_ESV1K
Model size540
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.31e-83
EggNOG OGs4QB94@10239|Viruses,4QVJI@35237|dsDNA viruses no RNA stage
DescriptionErv1 / Alr family
Cds size531
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789709.6388094-CDS-P-littoralis_Contig15:91087..916181680789709.6388094-CDS-P-littoralis_Contig15:91087..91618Pylaiella littoralis U1_48CDSP-littoralis_Contig15 91088..91618 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789709.6546028-UTR-P-littoralis_Contig15:91618..916271680789709.6546028-UTR-P-littoralis_Contig15:91618..91627Pylaiella littoralis U1_48UTRP-littoralis_Contig15 91619..91627 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.21.1prot_P-littoralis_Contig15.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 91088..91618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.21.1

>prot_P-littoralis_Contig15.21.1 ID=prot_P-littoralis_Contig15.21.1|Name=mRNA_P-littoralis_Contig15.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MNENGLCTSTWGSPGWFFLHCVAAGYPVDPDAHDEARGYARGHTRRAYTT
FFKTTGTVLPCRFCRDSYASFITETPIEDYIHTRKKLFEWLFIIHNKVNA
KLGDKQEPDLASVVDKYERFRASCNLDKSEESKGCTEPAEKKVKLKCRLI
IEPIRTRTRWVGWGARSIVAVIISVLL
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mRNA from alignment at P-littoralis_Contig15:91088..91627-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.21.1 ID=mRNA_P-littoralis_Contig15.21.1|Name=mRNA_P-littoralis_Contig15.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=540bp|location=Sequence derived from alignment at P-littoralis_Contig15:91088..91627- (Pylaiella littoralis U1_48)
CACAACCAGATGAATGAGAATGGTCTATGCACAAGCACATGGGGATCACC CGGCTGGTTTTTCTTGCACTGCGTCGCCGCGGGTTATCCGGTCGATCCGG ACGCGCACGATGAGGCGCGCGGGTACGCCAGGGGTCACACCCGGCGTGCG TACACGACTTTTTTCAAAACCACGGGAACTGTTCTCCCGTGCCGATTCTG CAGAGATTCGTACGCGTCGTTTATCACCGAAACACCGATAGAGGACTACA TTCACACACGCAAGAAGCTTTTCGAGTGGCTGTTCATCATACACAACAAG GTCAACGCCAAGCTCGGTGACAAGCAAGAACCCGACCTCGCCTCCGTCGT CGACAAGTACGAGAGGTTTCGTGCGTCGTGCAACTTGGACAAATCGGAGG AATCGAAGGGGTGCACCGAGCCCGCAGAGAAAAAAGTCAAACTGAAATGT AGGCTGATTATTGAACCCATCCGAACACGAACAAGATGGGTGGGGTGGGG CGCACGTAGCATCGTCGCGGTGATCATAAGCGTATTGTTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:91088..91627-

>mRNA_P-littoralis_Contig15.21.1 ID=mRNA_P-littoralis_Contig15.21.1|Name=mRNA_P-littoralis_Contig15.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=531bp|location=Sequence derived from alignment at P-littoralis_Contig15:91088..91627- (Pylaiella littoralis U1_48)
ATGAATGAGAATGGTCTATGCACAAGCACATGGGGATCACCCGGCTGGTT
TTTCTTGCACTGCGTCGCCGCGGGTTATCCGGTCGATCCGGACGCGCACG
ATGAGGCGCGCGGGTACGCCAGGGGTCACACCCGGCGTGCGTACACGACT
TTTTTCAAAACCACGGGAACTGTTCTCCCGTGCCGATTCTGCAGAGATTC
GTACGCGTCGTTTATCACCGAAACACCGATAGAGGACTACATTCACACAC
GCAAGAAGCTTTTCGAGTGGCTGTTCATCATACACAACAAGGTCAACGCC
AAGCTCGGTGACAAGCAAGAACCCGACCTCGCCTCCGTCGTCGACAAGTA
CGAGAGGTTTCGTGCGTCGTGCAACTTGGACAAATCGGAGGAATCGAAGG
GGTGCACCGAGCCCGCAGAGAAAAAAGTCAAACTGAAATGTAGGCTGATT
ATTGAACCCATCCGAACACGAACAAGATGGGTGGGGTGGGGCGCACGTAG
CATCGTCGCGGTGATCATAAGCGTATTGTTA
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