mRNA_P-littoralis_Contig15.18.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: Q8QNA2_ESV1K (EsV-1-186 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNA2_ESV1K) HSP 1 Score: 659 bits (1700), Expect = 1.070e-227 Identity = 369/696 (53.02%), Postives = 480/696 (68.97%), Query Frame = 1
Query: 1 MMQAIARVLGCLVAQYLCVLVSNSVFASPNGTIFFWTQSAITIGAMFLTPDRRWPERLAHVTSGMLSYAPFRYNKFSVPLLAAVCASNALGQVFGFLSMKRYFPSLTKGDIGTLRFLGIFFVFPVLLASVVASVPGSLGFYYLGTGVDLYAVIVNYTLGHISGTAVLLYPLLVVAVAWNDGRRVKGVTALCAISVPVVTGLLFAFTEYHVYAFANVVVVYGLFVGIGAIMDQGVASVVVAASTSVILGMTAAGRGPFVDLNGDDGARAVLIGTQMGITSLTMVSAFVVTVVSKVRALEMRGRQSRHLADRVAERQMLELHRIGHDMNNNSALVQAMCEQNLNLDGGPTSCRRATDALQTVAAINTLNGVLVSDMVDMVRGNTDTTRNMSREKVDILELVHMYLTISECMTRLAGKNGCIST--RLENTNXXXXXXXXXXXXXXXXDECVVFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREIPSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGESGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTLVITKPFTSADVSAAL 2082
M+ + R+LG +AQY+ VLVS VF SP GTIF+WTQ+AI I AM T D WPER+ H+ S ML+Y PFR+ KF VPLL A+CASNALGQ FG++SMK ++P L+ ++GTLRFL IF FPV++AS+VAS+PGSL FY+LGT V+L +V+VNYTLGHISGT LLYPLL+V W + R T +C ISV + + F++YH++ FA++V +Y L VG+ A +DQ AS+V A T ILG TAAGRGPFV + D A VLIGTQMGI +L+ ++AFVV +VS++R L+ R SR A +AERQ L+L+RIGHDM NN+ L+QA+CE DG L+TV ++N L VLVSDMVDMV G R + +E VDI EL+++Y + + L K+ I+ R+++ + + +TNRERLHQ+MCNLVSNAVKYT+ G IVL+ S + TV +RVTDSG+GLSE DV KVFDLF+RSERA++ NSGTGLGL+NV+++C AIDA+I VSSPGEG+GSTFTLVLPR + + R+I ++FS R+LAMDDS++I +L++KYL GCEVV SAEE+R LL FD+VITD SMG E+G DFI S+R V GL +PCILCSGE H D +TL I KPF++AD++ AL
Sbjct: 1 MLPCVGRILGGFIAQYIGVLVSMEVFVSPGGTIFWWTQTAIAIAAMLHTSDTHWPERVGHIASSMLTYIPFRFRKFPVPLLLAICASNALGQFFGYVSMKHFYPVLSPKEVGTLRFLAIFVAFPVIIASIVASIPGSLAFYFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKNRPRSPN-TLVCGISVFLGITSMCPFSDYHLFGFASIVGMYALLVGVSAYIDQFQASLVQLACTGSILGFTAAGRGPFVHVMKDGEAEEVLIGTQMGIAALSALNAFVVILVSQLRDLQKSERISRCQAAELAERQTLDLYRIGHDMKNNATLIQAICEVG-ETDGD-------NRILETVKSVNILGNVLVSDMVDMVNGK-QVHRAVPKEDVDITELLNVYSMVGTGLLLLEEKDKDITVGVRIDDES----------------ENFGAYTNRERLHQIMCNLVSNAVKYTQCGKIVLSAGCSSESTVEIRVTDSGVGLSEADVCKVFDLFFRSERASQINSGTGLGLSNVRKICDAIDAKIEVSSPGEGKGSTFTLVLPRRRRSTVSSPRQISTQFSFRILAMDDSILILRLLSKYLTSFGCEVVNACSAEESRALLGQPNQEKFDMVITDSSMGD-ETGIDFINSLRKGAVRGLPSDLPCILCSGEGHEF--GDPRTLSIIKPFSAADIAEAL 667
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: D8LPK5_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPK5_ECTSI) HSP 1 Score: 643 bits (1658), Expect = 2.310e-221 Identity = 358/694 (51.59%), Postives = 475/694 (68.44%), Query Frame = 1
Query: 1 MMQAIARVLGCLVAQYLCVLVSNSVFASPNGTIFFWTQSAITIGAMFLTPDRRWPERLAHVTSGMLSYAPFRYNKFSVPLLAAVCASNALGQVFGFLSMKRYFPSLTKGDIGTLRFLGIFFVFPVLLASVVASVPGSLGFYYLGTGVDLYAVIVNYTLGHISGTAVLLYPLLVVAVAWNDGRRVKGVTALCAISVPVVTGLLFAFTEYHVYAFANVVVVYGLFVGIGAIMDQGVASVVVAASTSVILGMTAAGRGPFVDLNGDDGARAVLIGTQMGITSLTMVSAFVVTVVSKVRALEMRGRQSRHLADRVAERQMLELHRIGHDMNNNSALVQAMCEQNLNLDGGPTSCRRATDALQTVAAINTLNGVLVSDMVDMVRGNTDTTRNMSREKVDILELVHMYLTISECMTRLAGKNGCISTRLENTNXXXXXXXXXXXXXXXXDECVVFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREIPSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGESGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTLVITKPFTSADVSAAL 2082
M + R+LG +AQY+ VLVS VFASP GTIF+WTQ+AI I AM TPD WPER+ H+ S L+Y PFR+ KF VPLL A+CASN++GQ FG++SMK +FP L++ ++GTL+FL IF FPV++AS+VAS+PGSL FY+LGT VDL++V VNYTLGH+SGT LLYPLL+V W R T +C S + AF+ YH+ FA++VV+YGL VG+ A +DQ AS+V A ILG+TAAGRGPFV D VLIGTQMGI +L+ ++AFVV +VS++R L+ + SR A+ +AERQ L+L+RIGHDM NN+ L+QA+CE DG L+TV ++N L VLVSDMVDMV G+ R + +E VDI EL+++Y + M L GK+ I+ + + ++ V+ N+ERLHQ+MCN++SN+VKYT+ G IVL + TV +RVTDSGIG+SE DV KVFDLF+RS A++ NSGTGLGL+NV+++C++I A+I VSSPGEG+GSTFTLV PR++ + R+I ++FS +LAMDDS++IR LM+KYL GC+VV+ SAEE+R LL FD+VITD MG E+G DFI S+R V GLS +PCILCSG+ H DD +T+ ITKPF+SAD++ AL
Sbjct: 1 MFACLGRILGGFIAQYIGVLVSIKVFASPGGTIFWWTQTAIAIAAMLHTPDPHWPERVGHIASSTLTYIPFRFRKFPVPLLFAICASNSMGQFFGYVSMKHFFPVLSQKEVGTLKFLAIFVAFPVVIASIVASIPGSLAFYFLGTDVDLFSVAVNYTLGHMSGTIALLYPLLIVPALWKTRSRSPN-TLVCGTSAFFGITSMCAFSNYHLLGFASIVVMYGLLVGVSACIDQFHASLVQLACMGSILGLTAAGRGPFVHAVKDRETDEVLIGTQMGIAALSALNAFVVILVSQLRDLQTFEKISRCQAEELAERQTLDLYRIGHDMKNNATLIQALCEVG-ETDGD-------NSILETVKSVNILGNVLVSDMVDMVNGSK-AHRVVPKEDVDIKELLNVYSMVGTGMLLLEGKDKDITMGVRIADG---------------EKLEVYINKERLHQIMCNILSNSVKYTQSGTIVLEAGCCSESTVEIRVTDSGIGMSEADVCKVFDLFFRSGPASQINSGTGLGLSNVRKICNSIGAKIDVSSPGEGQGSTFTLVFPRTRRSIVSSPRQISTQFSFHILAMDDSVLIRGLMSKYLTSFGCDVVSACSAEESRALLGQPNQEKFDIVITDSFMGD-ETGIDFINSLRRGAVRGLSSDLPCILCSGDIHEF--DDPRTISITKPFSSADIADAL 666
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: A0A6H5JPI3_9PHAE (MASE1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI3_9PHAE) HSP 1 Score: 525 bits (1353), Expect = 2.900e-176 Identity = 323/696 (46.41%), Postives = 420/696 (60.34%), Query Frame = 1
Query: 1 MMQAIARVLGCLVAQYLCVLVSNSVFASPNGTIFFWTQSAITIGAMFLTPDRRWPERLAHVTSGMLSYAPFRYNKFSVPLLAAVCASNALGQVFGFLSMKRYFPSLTKGDIGTLRFLGIFFVFPVLLASVVASVPGSLGFYYLGTGVDLYAVIVNYTLGHISGTAVLLYPLLVVAVAWNDGRRVKGVTALCAISVPVVTGLLFAFTEYHVYAFANVV-VVYGLFVGIGAIMDQGVASVVVAASTSVILGMTAAGRGPFVDLNGDDGARAVLIG-TQMGITSLTMVSAFVVTVVSKVRALEMRGRQSRHLADRVAERQMLELHRIGHDMNNNSALVQAMCEQNLNLDGGPTSCRRATDALQTVAAINTLNGVLVSDMVDMVRGNTDTTRNMSREKVDILELVHMYLTISECMTRLAGKNGCISTRLENTNXXXXXXXXXXXXXXXXDECVVFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREIPSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGESGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTLVITKPFTSADVSAAL 2082
M + R+LG +AQY+ VL S VFASP GTIF WTQ+AI I AM TPD WPER+ H+ S L Y PFR+ KF VPLL AVCASN+LGQ+FG++SMK ++P L+ ++GTLRFL IF FPV++AS+VAS+PGSL FY+LGT V+L +V+VNYTLGHISGT LLYPLL+V W R +C IS + + + YH+ A++V ++Y L +G+ A +DQ AS+V A T ILG TAAGRGPFV + A VLIG TQMGI +L+ ++AFVV +VS++R L+ R SR A+ +AERQ L+L+RIGHDM NN+ L+Q +CE G T L+TV ++N L VLVSDMVDMV G R + +E VDI EL+++Y + + L GK+ I+ + + TNRERLH+++CNL+SNAV +GIGLSE DV KVFDLF+RS RA++ NSGTGL VSSPGEG+GSTFTL LPR + + +++ +RFS RVLAMDDS++I + ++KYL LGCE FDVVITD +G E+G DF SVR V GL R +P ILCSG+ H + D +TL ITKPF+ AD+ AL
Sbjct: 1 MFPCVGRILGGFIAQYIGVLASIRVFASPGGTIFSWTQTAIAIAAMLHTPDTHWPERVGHIASSTLPYIPFRFRKFPVPLLLAVCASNSLGQLFGYVSMKHFYPVLSSEEVGTLRFLAIFVAFPVIIASIVASIPGSLAFYFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKTRPRSPN-ALVCGISAFLGITSMCPVSNYHLLGLASIVGIMYALLIGVSAYVDQFQASLVQLAFTGSILGFTAAGRGPFVHVTKGGEAEEVLIGSTQMGIAALSALNAFVVILVSQLRDLQKFERISRCQAEELAERQTLDLYRIGHDMKNNATLIQTICEV------GETDADNRI--LETVKSVNILGNVLVSDMVDMVNGK-QVHRVVPKEDVDIAELLNVYSMVGTGLLLLEGKDKDITVGVRIDDDGENFGAQ--------------TNRERLHKIVCNLLSNAV--------------------------NGIGLSEADVCKVFDLFFRSGRASQINSGTGLE----------------VSSPGEGKGSTFTLFLPRKRRSIVSRQKQVSTRFSFRVLAMDDSVLILRPLSKYLSSLGCE---------------------FDVVITDSFIGD-ETGIDFFCSVRRGGVMGLPRDLPSILCSGDSH--ESGDPRTLSITKPFSVADICHAL 606
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: D7G737_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G737_ECTSI) HSP 1 Score: 409 bits (1052), Expect = 1.310e-128 Identity = 270/707 (38.19%), Postives = 400/707 (56.58%), Query Frame = 1
Query: 7 QAIARVLGCLVAQYLCVLVSNSVFASPNGTIFFWTQSAITIGAMFLTPDRRWPERLAHVTSGMLSY--APFRYNKFSVPLLAAVCASNALGQVFGFLSMKRYFPS--LTKGDIGTLRFLGIFFVFPVLLASVVASVPGSLGFYYLGTGVDLYAVIVNYTLGHISGTAVLLYPLLVVAVAWNDGRRVKGVTALCAISVPVVTGLLFAFTEYHVYAFANVVVVYGLFVGIGAIMDQGVASVVVAASTSVILGMTAAGRGPFVDL-NGDDGARAVLIGTQMGITSLTMVSAFVVTVVSKVRALEMRGRQSRHLADRVAERQMLELHRIGHDMNNNSALVQAMCEQNLNLDGGPTSCRRATDALQTVAAINTLNGVLVSDMVDMVRGNTDTTRNMSREKVDILELVHMYLTISECMTRLAGKNGCISTRLENTNXXXXXXXXXXXXXXXXDECVVFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDD----TVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREI-----PSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGE-SGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTLVITKPFTSADVSAAL 2082
+ + RV G Q L V S S+F T + WT AIT G +F TP ER AHV SG L+Y F Y++F L+ +V NALG V G +R FP +T DI L+FLG +FPV + S+ ASVPGS+ F L G +L+ V VNYT+GHISGT V+LYP +V+ W+ + ++ L V L+FAFT Y V+AF ++ YG V + +DQ A ++ A + +++LG+T GRGPF + ++GAR V++ TQ+ T T SAFV +++R L+ R + S A++V E Q ++L ++GHDM NNS + + E D P + + A+ L+++ A T++G LV DM+D + R + R +VD+ E+ +++ ++ + R+AGK+ I T L+ E VFT+R+RLHQ++ NLV NAVKYT+ G IVL V +D +V+++V D+GIG+ +D+ KVF +R R + G+GLGL++V +C + A++ V SPG +G+T TL LP D + ++ + P R L +DDSLVIR++M + L +LGC+V S E+A+ K G DVVITD MG G+ +G D I+ +R R+ G+S+ VPCILCSG ++ D TL + KPF+ DVS AL
Sbjct: 32 RVLGRVAGGFALQLLSVYTSISIFVKD--TSYLWTGMAITAGLLFSTPAECRLERFAHVFSGALAYYLLDFHYDRFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMTPRDIEQLKFLGALMLFPVFVGSLAASVPGSVAF-RLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQPIQPAMVLGLAGVV----LMFAFTGYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTVGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQTREKASLERAEKVIEAQTVQLCKVGHDMLNNSTFIWGVTESLA--DTLPPTGQSASQ-LKSIQAAITMSGTLVKDMIDSFKPEGHG-RPVRRTEVDVQEMADLHVNFAKALVRMAGKS--IETTLDKGTTEG--------------EFNVFTDRDRLHQILGNLVGNAVKYTKSGTIVLRVSRQDDSGKTGSVILQVVDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDVKSPGIDKGTTVTLELPIGTDPTKTNTMDAGLEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFLAK-GGAIDVVITDMYMGQGQCTGADLISGIRQGRLRGVSKDVPCILCSGREVKMEEFGDNTLFMWKPFSETDVSHAL 710
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: A0A6H5JSS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS5_9PHAE) HSP 1 Score: 405 bits (1040), Expect = 7.230e-127 Identity = 269/707 (38.05%), Postives = 397/707 (56.15%), Query Frame = 1
Query: 7 QAIARVLGCLVAQYLCVLVSNSVFASPNGTIFFWTQSAITIGAMFLTPDRRWPERLAHVTSGMLSY--APFRYNKFSVPLLAAVCASNALGQVFGFLSMKRYFPS--LTKGDIGTLRFLGIFFVFPVLLASVVASVPGSLGFYYLGTGVDLYAVIVNYTLGHISGTAVLLYPLLVVAVAWNDGRRVKGVTALCAISVPVVTGLLFAFTEYHVYAFANVVVVYGLFVGIGAIMDQGVASVVVAASTSVILGMTAAGRGPFVDL-NGDDGARAVLIGTQMGITSLTMVSAFVVTVVSKVRALEMRGRQSRHLADRVAERQMLELHRIGHDMNNNSALVQAMCEQNLNLDGGPTSCRRATDALQTVAAINTLNGVLVSDMVDMVRGNTDTTRNMSREKVDILELVHMYLTISECMTRLAGKNGCISTRLENTNXXXXXXXXXXXXXXXXDECVVFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSED----DTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREI-----PSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGE-SGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTLVITKPFTSADVSAAL 2082
+ +ARV Q L V S SVF T + WT AIT G +F TP ER AHV SG L+Y F Y +F L+ AV NALG V G +R FP + DI L+FLG +FPV S+ ASVPGS+ F L G +L+ V VNYT+GHISGT V+LYP +V+ W+ + ++ L V L+FAFT+Y V+AF ++ YG V + +DQ A ++ A + +++LG+T GRGPF + ++GAR V++ TQ+ T T SAFV +++R L+ R + S A+++ E Q ++L ++ HDM NN+ + + E D P + + A+ AAI T+NG LV DM D + R + R +VD+ E+ +++ ++ + R+AG++ I T L+ E VFT+R+RLHQ++ NLV NAVKYT+ G IVL V +D +V+++V D+GIG+ +D+ K+F +R R + G+GLGL++V +C ++A++ + SPG +G+T TL LP D + ++ + P RVL +DDSLVIR++M + L +LGC+V S E+A+ L K G DVVITD MG G +G D I+ +R R+ G+S++VPCILCSG ++ D TL + KPF+ DVS AL
Sbjct: 32 RVLARVAAGFALQLLSVYTSISVFVKD--TSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVAVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAF-RLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQPIQAAMVLGLAGVV----LMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVAHDMLNNTTFIWGVTESLA--DTLPPTGQSASQLKMIQAAI-TMNGTLVKDMTDSFKPEGHG-RPIRRTEVDVQEMAELHVNFAKALVRMAGRS--IETTLD--------------LGTAEGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKIFGTLFRCARGAQLAPGSGLGLSSVLDMCKLLEAKVDLQSPGVDKGTTVTLELPIGTDPTKTNAVDAGVEWTPPATGFRVLVIDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHLMAK-GAAIDVVITDHYMGQGRCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGDNTLFMWKPFSKTDVSHAL 710
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: D7G325_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G325_ECTSI) HSP 1 Score: 350 bits (899), Expect = 3.770e-111 Identity = 208/420 (49.52%), Postives = 272/420 (64.76%), Query Frame = 1
Query: 823 MGITSLTMVSAFVVTVVSKVRALEMRGRQSRHLADRVAERQMLELHRIGHDMNNNSALVQAMCEQNLNLDGGPTSCRRATDALQTVAAINTLNGVLVSDMVDMVRGNTDTTRNMSREKVDILELVHMYLTISECMTRLAGKNGCISTRLENTNXXXXXXXXXXXXXXXXDECVVFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREIPSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGESGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTLVITKPFTSADVSAAL 2082
MGI +L ++AFVV +VS +R L+ R SR A+ +AERQ L+L+RIGHDM NN+ L+QA+CE P + R L+TV +IN L VLVSDMVDMV G R + +E VD+ EL+++Y + M L GK+ ++ + ++ V+TNRERLHQ+MCNL+SNAVKYT+ G IVL ++TV +RV DSGIGL E DV +VFDLF+RS RA++ +SGTGLGL+NV+ +C AI A+I VSSPGEG+G TFTLVLPR + + +I +FS RVLAMDDS+VI +L++KY GCEVV SAEE+R LL FDVVITD MG E+G D I S+R V GL +PCILCSG+ H DD +T+ ITKPF+SAD++ AL
Sbjct: 1 MGIAALLALNAFVVILVSLLRDLQTFERISRCQAEELAERQTLDLYRIGHDMKNNATLIQAVCEV-------PDADNRI---LETVKSINILGNVLVSDMVDMVNGK-QAHRVVPKEDVDVTELLNVYSMVGTGMLLLEGKDKDVTVGVRIAGS---------------EKFEVYTNRERLHQIMCNLLSNAVKYTQTGKIVLVAGCCSENTVEIRVVDSGIGLCEADVCRVFDLFFRSRRASQISSGTGLGLSNVRNICDAIGAKIGVSSPGEGKGCTFTLVLPRRRRSIFSGHGQISMQFSFRVLAMDDSIVILRLLSKYFTSFGCEVVNACSAEESRALLGQPNQEKFDVVITDSFMGD-ETGIDVIHSLRRGAVRGLPSDLPCILCSGDSHEF--DDPRTVSITKPFSSADIADAL 391
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: UPI001E488AA2 (hybrid sensor histidine kinase/response regulator n=1 Tax=Aurantimonas sp. VKM B-3413 TaxID=2779401 RepID=UPI001E488AA2) HSP 1 Score: 124 bits (312), Expect = 1.090e-25 Identity = 91/257 (35.41%), Postives = 133/257 (51.75%), Query Frame = 1
Query: 1342 VFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSRE--IPSRFSL-----RVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGESGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTL---VITKPFTSADVSAAL 2082
V ++R L +++ NLVSNAVKYT +G +V+ V + V V V DSGIG+ D + ++ F R + TK G GLGL+ V R+ +D + V+S GRG+ F + LP E ++R P+R SL VL +D+ IR M LE GC + A SAEEA + + G D+ + D + G +G D + ++R AR L P IL + +R RD+ L V+TKP A + AA+
Sbjct: 889 VRSDRNLLRRLIQNLVSNAVKYTRQGKVVVGVRRRTNGRVDVEVADSGIGIPGDKLEAIYQEFVRLDEGTKTARGLGLGLSIVDRIARVLDLPVEVASK-HGRGTRFRVGLPTVHIEAVAEARPGAAPARGSLALAGTHVLCIDNEAAIRDGMRVLLEGWGCTIAAFGSAEEALQAVGESGGTSPDLALVDYHLDGGTTGFDAVRALR-AR---LGAEFPAILVTADRSPFVRDEALELGIHVLTKPLKPASLRAAM 1140
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: A0A6P1ZL91_9DELT (Uncharacterized protein n=2 Tax=Oceanidesulfovibrio marinus TaxID=370038 RepID=A0A6P1ZL91_9DELT) HSP 1 Score: 122 bits (306), Expect = 7.080e-25 Identity = 73/195 (37.44%), Postives = 118/195 (60.51%), Query Frame = 1
Query: 1342 VFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVR--VTDSGIGLSEDDVSKVFDLFYRSER-ATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLP-----RSKDEGQNDSREIPSRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSM 1902
+ T+ +R+HQ++ NLV+NA+KYT G I L VD +T VR + D+G+G+S D++S++FD FY++E TK N G GLGL +++ +D +I V S G+GSTFT++LP R K+ G+ + + SLR+L ++D+ + K + + LE+ G V ++ E+ +LS + FDVV+ D M
Sbjct: 1371 IVTDDKRVHQILSNLVNNAIKYTNDGRIELIVDLLPGETPQVRFQIVDTGVGMSPDEISRIFDKFYQAENYLTKANKGVGLGLTITQKLVELLDGEIQVESE-PGKGSTFTVILPIKRDKRRKNTGRAKGAQRGAVASLRILLVEDNPINLKYLQQVLEQNGHSVTTAANGEKGVNILSKEA---FDVVLMDVQM 1561
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: UPI001A94B752 (PAS-domain containing protein n=1 Tax=Jiella sonneratiae TaxID=2816856 RepID=UPI001A94B752) HSP 1 Score: 120 bits (301), Expect = 2.380e-24 Identity = 88/257 (34.24%), Postives = 129/257 (50.19%), Query Frame = 1
Query: 1342 VFTNRERLHQVMCNLVSNAVKYTERGDIVLTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSERATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLPRSKDEGQNDSREIPSRFS-------LRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGESGRDFIASVRNARVDGLSRSVPCILCSGERHSIDRDDDKTL---VITKPFTSADVSAAL 2082
V ++R L +++ NLVSNAVKYT +G IV+ V V + V DSGIG+ +D + +++ F R + T+ SG GLGL+ V R+ +D + S GRG++F + LP + + RF +VL +D+ IR M L GC V A ++ EA + LS GF DV + D + G+ G I +R DGL P IL + +R + RDD L V+TKP A + AA+
Sbjct: 895 VRSDRHLLRRLVQNLVSNAVKYTRQGKIVVGVRRRASGRVEIEVADSGIGIPDDQLQSIYEEFVRLDEGTRAASGLGLGLSIVDRIARVLDHPLSARSR-HGRGTSFRVALPLATGAAEAALPAAAPRFQPGLSVAGTKVLCIDNDAAIRDGMKTLLSGWGCHVEAFNAPSEALQALSAG-GFRPDVALVDYHLDRGDDGIRAIGDLRLRLGDGL----PAILVTADRSAKLRDDAAVLGVQVLTKPVKPASLRAAM 1145
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Match: A0A5C0B0H1_9BURK (Histidine kinase n=1 Tax=Pigmentiphaga aceris TaxID=1940612 RepID=A0A5C0B0H1_9BURK) HSP 1 Score: 119 bits (298), Expect = 2.620e-24 Identity = 77/199 (38.69%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 1342 VFTNRERLHQVMCNLVSNAVKYTERGDIV---LTVDGSEDDTVVVRVTDSGIGLSEDDVSKVFDLFYRSER-ATKNNSGTGLGLANVKRVCSAIDAQILVSSPGEGRGSTFTLVLP---RSKDEGQNDSREIP-SRFSLRVLAMDDSLVIRKLMTKYLEKLGCEVVATSSAEEARRLLSPKLGFDFDVVITDCSMGSGE 1914
V+ + RL Q++ NL+ NA+K++ RGD V LTV G E V VR+TD+GIG+SE D S++F F + E + G GLGLA + ++ VSSPG GRGS+FTLVLP + E Q+++ + S+ +LR+L ++DS ++M + L +G E S A+R+LS + DFDV++ D + G+
Sbjct: 400 VWADALRLQQILSNLLKNAIKFSSRGDRVDASLTVQGDE---VQVRITDTGIGISESDFSRIFVAFEQGEEDPQRQRGGLGLGLAIADSLARQHRGRLSVSSPGIGRGSSFTLVLPVYDKQISELQDEASNVQQSQGNLRILLVEDSEDAAEMMNELLSLMGYECTVASRVSIAKRVLSQQ---DFDVLLCDMGLPDGD 592 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.18.1 >prot_P-littoralis_Contig15.18.1 ID=prot_P-littoralis_Contig15.18.1|Name=mRNA_P-littoralis_Contig15.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=694bp MMQAIARVLGCLVAQYLCVLVSNSVFASPNGTIFFWTQSAITIGAMFLTPback to top mRNA from alignment at P-littoralis_Contig15:78256..80337+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.18.1 ID=mRNA_P-littoralis_Contig15.18.1|Name=mRNA_P-littoralis_Contig15.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2082bp|location=Sequence derived from alignment at P-littoralis_Contig15:78256..80337+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:78256..80337+ >mRNA_P-littoralis_Contig15.18.1 ID=mRNA_P-littoralis_Contig15.18.1|Name=mRNA_P-littoralis_Contig15.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2082bp|location=Sequence derived from alignment at P-littoralis_Contig15:78256..80337+ (Pylaiella littoralis U1_48)back to top |