mRNA_P-littoralis_Contig15.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI) HSP 1 Score: 1180 bits (3053), Expect = 0.000e+0 Identity = 594/630 (94.29%), Postives = 613/630 (97.30%), Query Frame = 2
Query: 200 GRSHGDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDKRRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSEGK 2089
G + LLSEYRGLFEPLRVKRPPPK+PPEHPKTEEELTGREDFLYNVKARLNDVL+IEA CRKVDFHL+KRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG +MSKKDASNLVRDVRNTRKDMWKSMREPGTE PPKAFSLMPHFSLTRAFVRYDSQSIG LAKSLDF GVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRP+T+KNQTQRTRKVLRLNNRYRKGIGVC+KDPWFTDE+LYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQ KLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSP+TFEASEFKGS+SSISSREYKHQSLTRFSA+AEV RRLD+VEYGQAV+AFDSVSLKQPGSSVAYSSVIYCTL VRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTY+Q VRKEQRSSAEPLSPERRKELLKKIRDK+RVVFFGNGQFGHGARG CPRKALIR LGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG+SC V++IDRDTNGSANIGVCGVFQLLGLKRPSFLCR SSEGK
Sbjct: 68 GEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGREDFLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGIKMSKKDASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAKSLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNRYRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPKTFEASEFKGSQSSISSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAFDSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYKQEVRKEQRSSAEPLSPERRKELLKKIRDKKRVVFFGNGQFGHGARGACPRKALIRALGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGQSCSVKFIDRDTNGSANIGVCGVFQLLGLKRPSFLCRKSSEGK 697
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA) HSP 1 Score: 337 bits (863), Expect = 9.320e-102 Identity = 233/643 (36.24%), Postives = 332/643 (51.63%), Query Frame = 2
Query: 218 LLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDN--HIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAE---PLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDE----GRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2071
L E R LR P P + P+ E + +NVK + L ++A R + + RRGEIW+ INE + S++ KT+ QR L+E P W DEG E+ +D + R + + R +W + +EPGT PP+ ++++P F L AF+ D+ + L K L G L+T G+++RLWWT FD H +R K+ + R + R+G+ + ++ W D+ Y A + P +V I++DG + V L TL P G ELV++GY +I+ V + +G+F++ PL L + D+ +E +G+DPGQ + VR +T EA++ KGS IS REY++Q+L + R E RR N Y A++++ D S + P +S +Y L E LS +RR FAR RA R + +ARDIA G+ A R E+R SA P+SP RR+ELL K++++ RVVFFGNGQFG GA GP PRKAL+++L +C VVL DE+ TSK C CG L QV GSRVFRCSS DE G C VRY+DRD G NI + GV +L G RP+ L R
Sbjct: 91 LAREEREALSHLRTPLPNPGRAIDPPQLRE-------YRFNVKNFPHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDEGPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVLSVLGKKLR-KGAGAADDALRT------GRSDRLWWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVT--RRTEAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSP-RRRELLAKVQERLAGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLAR 713
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.060e-88 Identity = 221/638 (34.64%), Postives = 321/638 (50.31%), Query Frame = 2
Query: 305 EELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQ--------SIGNLAKSLDFS----------GVSEN-----QVTLKTTGVKCSGKA-------ERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKG-SRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG--RSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNS 2077
E+L F N+ + VL+ EA R D + + +W+ IN Q + TKE KQ ++I P W +G + K + LVR + TR+ M S R PGT PPK F+L+P L + DS+ ++ N+ SLD G S+ Q L++ V+ KA + WW +F+ H E++ R P + + + + R GI W ++ L P PW VN+I+TDGLQV V LAT +P+ GV +LVKKGY SI+ + ++G+F A + G S ++ D +E+VG+DPGQ +Y A +TS + A +FK +S S+ +++ SL++ + RR DN+ Y A+ VS++ PG + AY++ ++ E LS RR + F RA+ R + MAR+I ++ A+RK S E R LL ++RD+ RV FFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTS CC CG+ L QVD SRV++C+S E ++C VR+IDRD N S NIG+CG+ LLG+ RP LCR +
Sbjct: 188 EQLDEMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRDIEPPAWIQDGDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLH-EKVRLRMPRRAEVNWKPAKPLGRKGKTAWGGIRCLWGTGWTIEDDLSKHGNKKP----PWFVNNITTDGLQVNVTLATKV-VDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSS--AEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAELSGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKVGPESEE------RAALLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCRTA 811
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA) HSP 1 Score: 301 bits (770), Expect = 9.900e-88 Identity = 233/656 (35.52%), Postives = 314/656 (47.87%), Query Frame = 2
Query: 212 GDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGRED----FLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYD------SQSIGNLA--KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANI---TSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2083
G L+ R +P RV P + +E R D F N+ VL EA R D + + +W+ IN Q + TK KQ + I P W E T+ K L R V + R + ++ R PGT PPK F+L+P L + D S + G A ++L G+ QV ER WW + + H + V +++ R + + R GI W + L P PW VN+I+TDGLQV V LAT T +P GV EL++KGYASI+ + ++G+F A + S L+ D IE VG+D GQ +Y A + TSPE F+ K + S+ ++K SL++ + E RR DN Y A+ SVS++ PG + AY+++++ V E LS ERR + F RA+ R + MA IA + A+RK P PE R+ LL ++RD RVVFFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG L QV+GSRVFRC S EG + C VR+IDRD N S NI +CG+ LLG RP LCR E
Sbjct: 136 GSGLTYIRNRLQPFRVAPPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDRIDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLHDKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIP-GVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFK----KIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCRGVGE 776
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA) HSP 1 Score: 290 bits (743), Expect = 6.910e-84 Identity = 224/649 (34.51%), Postives = 314/649 (48.38%), Query Frame = 2
Query: 212 GDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGRED----FLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAK----SLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVC--SKDPWFTDELL-YSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2071
G L+ R +P RV P + +E R D F N+ VLQ+EA R+ + + + +W+ IN Q + TK KQ + I P W E T+ K L R + + R + ++ R PGT PPK F+L+P L + D + I ++ + + G+S Q+ ER WW +F+ H + + R P + + + K L + G C ++ FT++L Y K PW VN+I+TDGLQV V LAT +P GV EL++KGY SI+ ++G+F A + S L+ D IE VG+D GQ +Y A I+S + A +FK + + S+ ++K SL + E RR DN Y A+ VS++ PG + AY+ ++ E LS +RR + F RA+ R + MA IA + A+RK P P+ R+ LL +RD RVVFFGN FGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG L QV+GSRVFRC S EG + C VR+IDRD N S NI +CG+ LLG+ RP LCR
Sbjct: 135 GSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGK-VRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP------PWFVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTS--AEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRK-----IGP-EPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 767
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A6H5KAA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA5_9PHAE) HSP 1 Score: 251 bits (642), Expect = 4.490e-75 Identity = 131/162 (80.86%), Postives = 134/162 (82.72%), Query Frame = 2
Query: 200 GRSHGDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 685
G + DLLSEYRGLFEPLR KRPPPKNPPEHPKTEEELTGREDFLYNVKA LNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS F++ G EMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT
Sbjct: 85 GEAMEDLLSEYRGLFEPLRAKRPPPKNPPEHPKTEEELTGREDFLYNVKAMLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS------FIQDER------------GGIEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 228
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA) HSP 1 Score: 241 bits (616), Expect = 8.660e-65 Identity = 195/628 (31.05%), Postives = 292/628 (46.50%), Query Frame = 2
Query: 275 KNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSE------------------RIVNRRPNTKKNQTQRTRKVLRLNNRYRK-GIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSA---EPLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLG 2044
+ P +P E + ++ +N+K + L + A R + + RRGEIW+ INE + S++ KT+ QR L+ P W DEG E+ +D R + + R +W + +EPGT PP+ ++++P F L AFV D++ + L L + G + +++RLWWT FD H +R K+ + R R V++ + R+ G+ + ++ W D+ Y A + P +V I++DG + V L TL P G ELV++GY +I+ V + +G+F++ PL P+ ++ LD G + + E A++ KGS IS REY++QSL + R E RR N Y A++ + D S + PG +S +Y L E LS +RR FAR RA R + +ARDIA G+ A R E+R SA P+SP RR+ELL +R++ R+VFFGNGQFG GA G PRKAL++ L +C VVL DE+ TSK G G C VRY+DRD G NI V + +G
Sbjct: 276 RTPLPNPGRERDAPQLREYRFNIKNFPHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDEGPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVLSVLGTKL-------RKAAGAADGALRTRRSDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRAR-RAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAPELVREGYDAIRGTCVVGRDRRGLFRDVAPL----------PEELLDC--LDAGDRACFV---------EAIGAADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSP-RRRELLANVRERLAGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTSKTYEDSGA-------------------GGRCSVRYLDRDCAGGGNIANDRVDEEVG 851
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA) HSP 1 Score: 198 bits (504), Expect = 7.700e-53 Identity = 165/465 (35.48%), Postives = 218/465 (46.88%), Query Frame = 2
Query: 731 KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGM-ARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2083
++L GV QV ER WW + + H + V +++ R + + R GI W + L P PW+VN+I+TDGLQV V LAT +P GV EL++KGY SI + ++G+F A + S L+ D IE VG+D GQ +Y A I+S + E FK + + S+ ++K SL++ A + F+ + L EE QKF R +G A DI G T A+RK P PE R+ LL ++RD RVVFFGN QFGHG+RGP PRKALIR + +L PVVL++EFRTSK CC CG L QV+GSRVFRC S EG + C VR+IDRD N S NI +CG+ LLG RP LCR + E
Sbjct: 45 RALQQEGVRSRQVRKDWKTRLTGDMTERGWWLCMLNLHDKVRVRVPRGAERSGEARMKPLGRKGKLAWGGIRSLWGQRWTIEGDLREYGHKAP----PWLVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSINDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSSE--NFKKIQPAFRSASDHKFLSLSK------------------AWRKFEGEAF------------------------LGEE--TQKF-------RCQEGEDAGDIEDGGTAA-ALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMNEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPQHLCRGAGE 444 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.4.1 >prot_P-littoralis_Contig15.4.1 ID=prot_P-littoralis_Contig15.4.1|Name=mRNA_P-littoralis_Contig15.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=514bp MSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRback to top mRNA from alignment at P-littoralis_Contig15:20637..22728+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.4.1 ID=mRNA_P-littoralis_Contig15.4.1|Name=mRNA_P-littoralis_Contig15.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2092bp|location=Sequence derived from alignment at P-littoralis_Contig15:20637..22728+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:20637..22728+ >mRNA_P-littoralis_Contig15.4.1 ID=mRNA_P-littoralis_Contig15.4.1|Name=mRNA_P-littoralis_Contig15.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1542bp|location=Sequence derived from alignment at P-littoralis_Contig15:20637..22728+ (Pylaiella littoralis U1_48)back to top |