mRNA_P-littoralis_Contig15.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.4.1
Unique NamemRNA_P-littoralis_Contig15.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI)

HSP 1 Score: 1180 bits (3053), Expect = 0.000e+0
Identity = 594/630 (94.29%), Postives = 613/630 (97.30%), Query Frame = 2
Query:  200 GRSHGDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDKRRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSEGK 2089
            G +   LLSEYRGLFEPLRVKRPPPK+PPEHPKTEEELTGREDFLYNVKARLNDVL+IEA CRKVDFHL+KRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG +MSKKDASNLVRDVRNTRKDMWKSMREPGTE PPKAFSLMPHFSLTRAFVRYDSQSIG LAKSLDF GVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRP+T+KNQTQRTRKVLRLNNRYRKGIGVC+KDPWFTDE+LYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQ KLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSP+TFEASEFKGS+SSISSREYKHQSLTRFSA+AEV RRLD+VEYGQAV+AFDSVSLKQPGSSVAYSSVIYCTL VRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTY+Q VRKEQRSSAEPLSPERRKELLKKIRDK+RVVFFGNGQFGHGARG CPRKALIR LGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG+SC V++IDRDTNGSANIGVCGVFQLLGLKRPSFLCR SSEGK
Sbjct:   68 GEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGREDFLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGIKMSKKDASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAKSLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNRYRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPKTFEASEFKGSQSSISSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAFDSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYKQEVRKEQRSSAEPLSPERRKELLKKIRDKKRVVFFGNGQFGHGARGACPRKALIRALGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGQSCSVKFIDRDTNGSANIGVCGVFQLLGLKRPSFLCRKSSEGK 697          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA)

HSP 1 Score: 337 bits (863), Expect = 9.320e-102
Identity = 233/643 (36.24%), Postives = 332/643 (51.63%), Query Frame = 2
Query:  218 LLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDN--HIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAE---PLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDE----GRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2071
            L  E R     LR   P P    + P+  E       + +NVK   +  L ++A  R +    + RRGEIW+ INE + S++   KT+     QR  L+E   P W DEG E+  +D +   R + +     R  +W + +EPGT  PP+ ++++P F L  AF+  D+  +  L K L   G       L+T      G+++RLWWT  FD H      +R   K+ +  R   +       R+G+ +  ++ W  D+  Y A +       P +V  I++DG +  V L TL    P   G  ELV++GY +I+    V +  +G+F++  PL       L + D+   +E +G+DPGQ  +   VR  +T     EA++ KGS   IS REY++Q+L   + R E  RR  N  Y  A++++  D  S + P     +S  +Y  L     E LS +RR   FAR RA  R +  +ARDIA G+    A R E+R SA    P+SP RR+ELL K++++          RVVFFGNGQFG GA GP PRKAL+++L  +C VVL DE+ TSK C  CG  L QV GSRVFRCSS  DE    G  C VRY+DRD  G  NI + GV +L G  RP+ L R
Sbjct:   91 LAREEREALSHLRTPLPNPGRAIDPPQLRE-------YRFNVKNFPHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDEGPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVLSVLGKKLR-KGAGAADDALRT------GRSDRLWWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVT--RRTEAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSP-RRRELLAKVQERLAGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLAR 713          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA)

HSP 1 Score: 304 bits (779), Expect = 1.060e-88
Identity = 221/638 (34.64%), Postives = 321/638 (50.31%), Query Frame = 2
Query:  305 EELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQ--------SIGNLAKSLDFS----------GVSEN-----QVTLKTTGVKCSGKA-------ERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKG-SRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG--RSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNS 2077
            E+L     F  N+    + VL+ EA  R  D   +  +  +W+ IN  Q  +    TKE   KQ    ++I  P W  +G    +   K +   LVR +  TR+ M  S R PGT  PPK F+L+P   L    +  DS+        ++ N+  SLD            G S+      Q  L++  V+   KA       +  WW  +F+ H E++  R P   +   +  + + R       GI       W  ++ L       P    PW VN+I+TDGLQV V LAT    +P+  GV +LVKKGY SI+     +  ++G+F  A  + G   S ++  D    +E+VG+DPGQ  +Y    A +TS  +  A +FK    +S S+ +++  SL++     +  RR DN+ Y  A+     VS++ PG + AY++ ++        E LS  RR + F   RA+ R +  MAR+I   ++   A+RK    S E      R  LL ++RD+         RV FFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTS  CC CG+ L QVD SRV++C+S   E   ++C VR+IDRD N S NIG+CG+  LLG+ RP  LCR +
Sbjct:  188 EQLDEMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRDIEPPAWIQDGDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLH-EKVRLRMPRRAEVNWKPAKPLGRKGKTAWGGIRCLWGTGWTIEDDLSKHGNKKP----PWFVNNITTDGLQVNVTLATKV-VDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSS--AEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAELSGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKVGPESEE------RAALLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCRTA 811          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 301 bits (770), Expect = 9.900e-88
Identity = 233/656 (35.52%), Postives = 314/656 (47.87%), Query Frame = 2
Query:  212 GDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGRED----FLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYD------SQSIGNLA--KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANI---TSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2083
            G  L+  R   +P RV  P      +     +E   R D    F  N+      VL  EA  R  D   +  +  +W+ IN  Q  +    TK    KQ    + I  P W  E      T+  K     L R V + R  + ++ R PGT  PPK F+L+P   L    +  D      S + G  A  ++L   G+   QV             ER WW  + + H +  V      +++   R + + R       GI       W  +  L       P    PW VN+I+TDGLQV V LAT   T  +P GV EL++KGYASI+   +    ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A +   TSPE F+    K   +  S+ ++K  SL++   + E  RR DN  Y  A+    SVS++ PG + AY+++++    V   E LS ERR + F   RA+ R +  MA  IA  +    A+RK       P  PE R+ LL ++RD          RVVFFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG  L QV+GSRVFRC S   EG +  C VR+IDRD N S NI +CG+  LLG  RP  LCR   E
Sbjct:  136 GSGLTYIRNRLQPFRVAPPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDRIDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLHDKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIP-GVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFK----KIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCRGVGE 776          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 290 bits (743), Expect = 6.910e-84
Identity = 224/649 (34.51%), Postives = 314/649 (48.38%), Query Frame = 2
Query:  212 GDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGRED----FLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAK----SLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVC--SKDPWFTDELL-YSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2071
            G  L+  R   +P RV  P      +     +E   R D    F  N+      VLQ+EA  R+ +   +  +  +W+ IN  Q  +    TK    KQ    + I  P W  E      T+  K     L R + + R  + ++ R PGT  PPK F+L+P   L    +  D + I ++ +     +   G+S  Q+             ER WW  +F+ H + +  R P + +   +   K L    +   G   C   ++  FT++L  Y  K        PW VN+I+TDGLQV V LAT      +P GV EL++KGY SI+        ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A I+S  +  A +FK  + +  S+ ++K  SL +     E  RR DN  Y  A+     VS++ PG + AY+  ++        E LS +RR + F   RA+ R +  MA  IA  +    A+RK       P  P+ R+ LL  +RD          RVVFFGN  FGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG  L QV+GSRVFRC S   EG +  C VR+IDRD N S NI +CG+  LLG+ RP  LCR
Sbjct:  135 GSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGK-VRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP------PWFVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTS--AEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRK-----IGP-EPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 767          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A6H5KAA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA5_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 4.490e-75
Identity = 131/162 (80.86%), Postives = 134/162 (82.72%), Query Frame = 2
Query:  200 GRSHGDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 685
            G +  DLLSEYRGLFEPLR KRPPPKNPPEHPKTEEELTGREDFLYNVKA LNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS      F++                G EMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT
Sbjct:   85 GEAMEDLLSEYRGLFEPLRAKRPPPKNPPEHPKTEEELTGREDFLYNVKAMLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS------FIQDER------------GGIEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 228          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA)

HSP 1 Score: 241 bits (616), Expect = 8.660e-65
Identity = 195/628 (31.05%), Postives = 292/628 (46.50%), Query Frame = 2
Query:  275 KNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSE------------------RIVNRRPNTKKNQTQRTRKVLRLNNRYRK-GIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSA---EPLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLG 2044
            + P  +P  E +     ++ +N+K   +  L + A  R +    + RRGEIW+ INE + S++   KT+     QR  L+    P W DEG E+  +D     R + +     R  +W + +EPGT  PP+ ++++P F L  AFV  D++ +  L   L        +      G   + +++RLWWT  FD H                        +R   K+ +  R R V++   + R+ G+ +  ++ W  D+  Y A +       P +V  I++DG +  V L TL    P   G  ELV++GY +I+    V +  +G+F++  PL          P+  ++   LD G  + +          E   A++ KGS   IS REY++QSL   + R E  RR  N  Y  A++ +  D  S + PG    +S  +Y  L     E LS +RR   FAR RA  R +  +ARDIA G+    A R E+R SA    P+SP RR+ELL  +R++          R+VFFGNGQFG GA G  PRKAL++ L  +C VVL DE+ TSK     G                    G  C VRY+DRD  G  NI    V + +G
Sbjct:  276 RTPLPNPGRERDAPQLREYRFNIKNFPHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDEGPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVLSVLGTKL-------RKAAGAADGALRTRRSDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRAR-RAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAPELVREGYDAIRGTCVVGRDRRGLFRDVAPL----------PEELLDC--LDAGDRACFV---------EAIGAADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSP-RRRELLANVRERLAGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTSKTYEDSGA-------------------GGRCSVRYLDRDCAGGGNIANDRVDEEVG 851          
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.700e-53
Identity = 165/465 (35.48%), Postives = 218/465 (46.88%), Query Frame = 2
Query:  731 KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQVKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLTRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGM-ARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2083
            ++L   GV   QV             ER WW  + + H +  V      +++   R + + R       GI       W  +  L       P    PW+VN+I+TDGLQV V LAT      +P GV EL++KGY SI    +    ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A I+S  + E   FK  + +  S+ ++K  SL++                  A + F+  +                         L EE   QKF       R  +G  A DI  G T   A+RK       P  PE R+ LL ++RD          RVVFFGN QFGHG+RGP PRKALIR + +L PVVL++EFRTSK CC CG  L QV+GSRVFRC S   EG +  C VR+IDRD N S NI +CG+  LLG  RP  LCR + E
Sbjct:   45 RALQQEGVRSRQVRKDWKTRLTGDMTERGWWLCMLNLHDKVRVRVPRGAERSGEARMKPLGRKGKLAWGGIRSLWGQRWTIEGDLREYGHKAP----PWLVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSINDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSSE--NFKKIQPAFRSASDHKFLSLSK------------------AWRKFEGEAF------------------------LGEE--TQKF-------RCQEGEDAGDIEDGGTAA-ALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMNEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPQHLCRGAGE 444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LP59_ECTSI0.000e+094.29N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A836CCX3_9STRA9.320e-10236.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z394_9STRA1.060e-8834.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYB9_9STRA9.900e-8835.52Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YYX5_9STRA6.910e-8434.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KAA5_9PHAE4.490e-7580.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZC24_9STRA8.660e-6531.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC03_9STRA7.700e-5335.48OrfB_Zn_ribbon domain-containing protein n=1 Tax=T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:20637..22728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3075.A0A087SAP3
PFAMsAIRS_C,GATase_5
Model size2092
Max annot lvl3041|Chlorophyta
KEGG rclassRC00010,RC01160
KEGG koko:K01952
KEGG ReactionR04463
KEGG Pathwayko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
Exons1
Evalue0.000219
EggNOG OGsCOG0046@1|root,KOG1907@2759|Eukaryota,37IK9@33090|Viridiplantae,34GNK@3041|Chlorophyta
EC6.3.5.3
DescriptionCobB/CobQ-like glutamine amidotransferase domain
Cds size1542
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789709.0764856-UTR-P-littoralis_Contig15:20636..211861680789709.0764856-UTR-P-littoralis_Contig15:20636..21186Pylaiella littoralis U1_48UTRP-littoralis_Contig15 20637..21186 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789709.0873451-CDS-P-littoralis_Contig15:21186..227281680789709.0873451-CDS-P-littoralis_Contig15:21186..22728Pylaiella littoralis U1_48CDSP-littoralis_Contig15 21187..22728 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.4.1prot_P-littoralis_Contig15.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 21187..22728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.4.1

>prot_P-littoralis_Contig15.4.1 ID=prot_P-littoralis_Contig15.4.1|Name=mRNA_P-littoralis_Contig15.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=514bp
MSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVR
YDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSE
RIVNRRPNTKKNQTQRTRKVLRLNNRYRKGIGVCSKDPWFTDELLYSAKR
DDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQ
VKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATV
RANITSPETFEASEFKGSRSSISSREYKHQSLTRFSARAEVRRRLDNVEY
GQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLR
ARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDKR
RVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGV
PLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLGLK
RPSFLCRNSSEGK*
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mRNA from alignment at P-littoralis_Contig15:20637..22728+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.4.1 ID=mRNA_P-littoralis_Contig15.4.1|Name=mRNA_P-littoralis_Contig15.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2092bp|location=Sequence derived from alignment at P-littoralis_Contig15:20637..22728+ (Pylaiella littoralis U1_48)
GTGGATCACCTTTCGTGTCGCCTCGAGAGAAGACTGTGGGAGTTCCGGGA CGACGAACACTTTGGACCAATATTCCCCGTGCAGCAAAGAAGATTTACGA GGCAGCTGGGCAGAAGACTCCTGAACGAGCTTTGCCAATTATACGGAAGT TCGTGGACCAGAAAAGAGGAAGTGAAAACGAGCTGCTTCGTCCTGAGTGG GGAGGAGCCATGGGGACCTCCTGTCGGAGTACAGGGGCCTCTTTGAACCT TTGCGTGTGAAGAGACCTCCACCCAAGAACCCCCCCGAACACCCGAAGAC AGAAGAAGAGTTGACCGGGCGCGAAGATTTCCTGTACAACGTGAAAGCCA GGCTGAACGATGTCTTACAGATCGAGGCCGAGTGTCGCAAGGTAGATTTT CACCTTCAAAAGAGGAGAGGGGAGATCTGGTCCGAAATCAACGAGAGGCA GCAGTCCATCAAGTCATCCAAGACGAAAGAGGGGTTCTTGAAACAGCGAC ATCTTCTGCAAGAAATACCTGTACCTCCATGGTTTGACGAGGGGACCGAG ATGAGCAAGAAGGACGCGTCGAATCTCGTGCGCGACGTTCGAAACACGAG GAAGGACATGTGGAAGAGCATGAGGGAGCCGGGAACAGAGCATCCACCGA AAGCCTTCTCACTGATGCCACACTTCTCTCTCACAAGGGCGTTCGTGAGG TACGACAGCCAGAGCATCGGCAACCTCGCCAAATCTCTTGATTTCTCCGG TGTTTCGGAAAACCAGGTCACTTTGAAGACCACTGGTGTGAAGTGTTCTG GGAAAGCTGAAAGACTCTGGTGGACGGGCATCTTTGACTTTCATTCGGAG AGGATCGTGAACAGACGCCCGAACACCAAGAAGAATCAGACACAGCGGAC GCGAAAAGTCCTTCGCCTGAACAACCGCTACCGAAAGGGAATCGGTGTAT GCAGTAAGGACCCGTGGTTCACCGACGAACTCCTTTACTCAGCGAAGAGA GATGACCCGAGCTGTGAAACACCCTGGATCGTCAATTCGATATCTACGGA CGGCCTACAGGTCAAGGTTTGCCTGGCTACTCTTGCAAAAACCAATCCGC TGCCGAAGGGTGTGAAGGAGCTCGTGAAGAAGGGCTACGCATCTATTCAG GTTAAGCTTCGAGTATCCAAAAGCTCCAAAGGCGTTTTCAAGGAGGCCTT CCCTCTCTACGGTACAGAGAAGTCCCGTCTTTCTTCCCCCGACAATCACA TTGAGGTTGTAGGTCTTGACCCCGGGCAAGTCTCCGTCTACGCGACGGTG AGAGCGAACATCACGTCCCCGGAGACATTCGAAGCTTCTGAGTTCAAGGG ATCACGGTCGTCCATTTCTTCTCGAGAATACAAGCACCAGTCGCTTACCC GCTTCAGCGCCAGGGCAGAAGTCAGAAGGAGACTTGATAACGTGGAATAT GGTCAAGCGGTTAAAGCCTTCGACTCCGTGTCGCTAAAACAGCCTGGTTC ATCTGTGGCGTACTCTTCCGTAATCTACTGCACGCTAGGTGTTAGAGTAG TGGAACTGCTTTCAGAAGAGCGTAGACTTCAGAAGTTTGCTAGACTTCGT GCGAGACAACGCACCGTTGACGGTATGGCTAGGGACATTGCTTTCGGAAA CACGTACAGGCAAGCGGTCAGGAAGGAGCAACGGTCTTCGGCCGAGCCGT TGTCACCAGAGAGGAGAAAGGAGTTGTTGAAGAAGATTCGAGATAAGAGG AGGGTTGTTTTCTTCGGCAACGGTCAGTTTGGCCATGGTGCGAGAGGACC TTGTCCTAGGAAAGCGCTGATTCGAGAGCTGGGTGTCCTTTGTCCGGTGG TATTGGTGGACGAGTTTCGAACGTCAAAATGCTGCTGTAGTTGCGGCGTT CCACTCAAGCAAGTGGATGGTTCTCGGGTATTTCGCTGTTCAAGCCAGAT GGACGAGGGCCGATCTTGCCCCGTGAGGTATATCGACAGAGATACGAATG GTTCGGCCAACATAGGAGTTTGTGGCGTGTTTCAGCTCCTGGGATTGAAG AGACCATCGTTCCTTTGTCGTAACTCTAGCGAGGGCAAGTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:20637..22728+

>mRNA_P-littoralis_Contig15.4.1 ID=mRNA_P-littoralis_Contig15.4.1|Name=mRNA_P-littoralis_Contig15.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1542bp|location=Sequence derived from alignment at P-littoralis_Contig15:20637..22728+ (Pylaiella littoralis U1_48)
ATGAGCAAGAAGGACGCGTCGAATCTCGTGCGCGACGTTCGAAACACGAG
GAAGGACATGTGGAAGAGCATGAGGGAGCCGGGAACAGAGCATCCACCGA
AAGCCTTCTCACTGATGCCACACTTCTCTCTCACAAGGGCGTTCGTGAGG
TACGACAGCCAGAGCATCGGCAACCTCGCCAAATCTCTTGATTTCTCCGG
TGTTTCGGAAAACCAGGTCACTTTGAAGACCACTGGTGTGAAGTGTTCTG
GGAAAGCTGAAAGACTCTGGTGGACGGGCATCTTTGACTTTCATTCGGAG
AGGATCGTGAACAGACGCCCGAACACCAAGAAGAATCAGACACAGCGGAC
GCGAAAAGTCCTTCGCCTGAACAACCGCTACCGAAAGGGAATCGGTGTAT
GCAGTAAGGACCCGTGGTTCACCGACGAACTCCTTTACTCAGCGAAGAGA
GATGACCCGAGCTGTGAAACACCCTGGATCGTCAATTCGATATCTACGGA
CGGCCTACAGGTCAAGGTTTGCCTGGCTACTCTTGCAAAAACCAATCCGC
TGCCGAAGGGTGTGAAGGAGCTCGTGAAGAAGGGCTACGCATCTATTCAG
GTTAAGCTTCGAGTATCCAAAAGCTCCAAAGGCGTTTTCAAGGAGGCCTT
CCCTCTCTACGGTACAGAGAAGTCCCGTCTTTCTTCCCCCGACAATCACA
TTGAGGTTGTAGGTCTTGACCCCGGGCAAGTCTCCGTCTACGCGACGGTG
AGAGCGAACATCACGTCCCCGGAGACATTCGAAGCTTCTGAGTTCAAGGG
ATCACGGTCGTCCATTTCTTCTCGAGAATACAAGCACCAGTCGCTTACCC
GCTTCAGCGCCAGGGCAGAAGTCAGAAGGAGACTTGATAACGTGGAATAT
GGTCAAGCGGTTAAAGCCTTCGACTCCGTGTCGCTAAAACAGCCTGGTTC
ATCTGTGGCGTACTCTTCCGTAATCTACTGCACGCTAGGTGTTAGAGTAG
TGGAACTGCTTTCAGAAGAGCGTAGACTTCAGAAGTTTGCTAGACTTCGT
GCGAGACAACGCACCGTTGACGGTATGGCTAGGGACATTGCTTTCGGAAA
CACGTACAGGCAAGCGGTCAGGAAGGAGCAACGGTCTTCGGCCGAGCCGT
TGTCACCAGAGAGGAGAAAGGAGTTGTTGAAGAAGATTCGAGATAAGAGG
AGGGTTGTTTTCTTCGGCAACGGTCAGTTTGGCCATGGTGCGAGAGGACC
TTGTCCTAGGAAAGCGCTGATTCGAGAGCTGGGTGTCCTTTGTCCGGTGG
TATTGGTGGACGAGTTTCGAACGTCAAAATGCTGCTGTAGTTGCGGCGTT
CCACTCAAGCAAGTGGATGGTTCTCGGGTATTTCGCTGTTCAAGCCAGAT
GGACGAGGGCCGATCTTGCCCCGTGAGGTATATCGACAGAGATACGAATG
GTTCGGCCAACATAGGAGTTTGTGGCGTGTTTCAGCTCCTGGGATTGAAG
AGACCATCGTTCCTTTGTCGTAACTCTAGCGAGGGCAAGTAG
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