mRNA_P-littoralis_Contig15.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.2.1
Unique NamemRNA_P-littoralis_Contig15.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 670 bits (1729), Expect = 2.560e-242
Identity = 334/349 (95.70%), Postives = 339/349 (97.13%), Query Frame = 2
Query:   59 WMQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSKKRSRLCHGRIYDHHRHGPIFSDKLT 1105
            WMQRRRKL TSSLFY LTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGY+TRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLR VRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGT+PFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEES KRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKS+KEPSYIYTLDTYVTHILNNVKRVSNPVKLSAH E +V SKKRSR  HGRIYDHHRHGP FSD+LT
Sbjct:   20 WMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHCETNVLSKKRSRF-HGRIYDHHRHGPFFSDELT 367          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 1.330e-206
Identity = 289/324 (89.20%), Postives = 301/324 (92.90%), Query Frame = 2
Query:   59 WMQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSK 1030
            WMQRRRKL TSSLFY LTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKI+AFKGT+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWRVEESFKRLKSNL+LEKAHA+TP LYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VT+IL NVKRVS P +      AD+ +K
Sbjct:   20 WMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSGPSRYKCPGVADLKAK 343          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 8.820e-188
Identity = 275/353 (77.90%), Postives = 303/353 (85.84%), Query Frame = 2
Query:   59 WMQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSKKRSRLCHGR------IYDHHRHGPIFSDK 1099
            W+QRRRK+ TSSLF+ LT+CC+Q RGV+H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI +GY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR VRKGDTL+FDRGYYSK+LLRSVHDSHAFGVWRLKI+AFKGT+ FFNSC TEA CLILG+ ARLLKYFI GKTYVCLTND SLSRRDIK MYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VTHIL NVKRVS+P +      A++ SK      H R      I D  R    FSD+
Sbjct:   35 WIQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVSSPTRYKFLRVAELESKTPFGRMHYRPSDTDIIIDFARREKDFSDR 387          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 529 bits (1362), Expect = 3.490e-186
Identity = 261/324 (80.56%), Postives = 289/324 (89.20%), Query Frame = 2
Query:   59 WMQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVSNPVKLSAHSEADVFSK 1030
            WMQRRRK+ TSSLFY LT+CC+Q RGV H+L+ME+E YSSQA+HSARKKLP GAFKEVNRFL RGPHEPRVFAVDGSKVHVHPSFI AGY TRTN++PV RPAKRPLVMLSSMVDVKTKAC+DFELTKHFNER+AAT MLR V+KGDTL+FDRGYYSK+LL SVH SHAFGVWRLKI+AF+GT+ FFNSC TEATCLILGV+ARLLKYFI GKTYVCLT D SLSR  IK MYASRWRVEESFKRLKSNL+LEKAHA+TP LYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VT+IL NVKRVS+P +      AD+ +K
Sbjct:   20 WMQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVSSPSRYKCLGVADLKAK 343          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 4.270e-164
Identity = 245/308 (79.55%), Postives = 267/308 (86.69%), Query Frame = 2
Query:   59 WMQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHILNNVKRVS 982
            WMQRRRKL TSS+FY +TKCC +ERGV+H+L+ME E+YSSQA+H ARKKLP GAFKEVNRFL RGPHEPR+FA+DGSKVHVHPSFI AGY TRTN+KPVPRPAKRPLVMLSSMVDV+TK+C+DFELTKHF+ER+AA  MLR VRK DTL+FDRGYYSK+LLRSVHDS AFGVWRL+I                  CLILGVR RLLKYFI GKTYVCLTND SLSRRDIK MYA RWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLR+Q S KE SY+YTLDT+VTHIL NVKRVS
Sbjct:   20 WMQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRI----------------MPCLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVS 311          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 2.820e-122
Identity = 191/250 (76.40%), Postives = 207/250 (82.80%), Query Frame = 2
Query:  155 MENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQK 904
            M NEQYSSQAIH ARKKLP GAFKEVNRFL +GPHEPRVFAVDGSKVHVHPSFIGAGY TRTN+KPVPRPAK PLVMLSSMVDVKTKACVDFELTKHFNE  +                 R Y  K  LRS+HDS AFGVWRLKINAFKGTK F +S  TE TCLILGV++RL+KY I+GKTYVCLTND +LSRRDIK +YASRWR E+S  RLKSN++LEKAHA+TP LYIQEVEARVLLDTITLRLQ+
Sbjct:    1 MGNEQYSSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPVPRPAKSPLVMLSSMVDVKTKACVDFELTKHFNEDGS-----------------RIYTQK--LRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQR 230          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 8.600e-41
Identity = 93/169 (55.03%), Postives = 102/169 (60.36%), Query Frame = 2
Query:   62 MQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAF 568
            +QRRRK+ TSSLFY LTK CIQERGV HILR ++EQYSSQA+HSARKKLP GAFKE                                        PVPRPA RPLVMLSSMVD           TK FNERKA   MLR V +GDTLVFD+ YYS+ LLR+VHDS AF
Sbjct:  175 IQRRRKIDTSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE----------------------------------------PVPRPATRPLVMLSSMVD-----------TKLFNERKADVSMLRSVHQGDTLVFDKEYYSRGLLRNVHDSKAF 292          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A2Z2NHE4_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NHE4_9GAMM)

HSP 1 Score: 107 bits (268), Expect = 7.820e-22
Identity = 83/268 (30.97%), Postives = 128/268 (47.76%), Query Frame = 2
Query:  173 SSQAIHSARKKLPPGAFKEVN-RFLQRGPHEP-------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLIL-------------------GVRARLLKYFISGKTYVC---LTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTI 886
            ++ A  +AR KL    FK +  + LQ+   +P       R+ AVDGSK+++    I AGY T ++N      A  P   +S + ++KTK  +DF+L  H +ERK A   L  + + D +V+DRGYYS ++L      H   ++RLK  A +  + F NS   +A   I                     +  RL+KY   G +Y+    L +    S   +  +Y SRW VEE +K  K  +K+E  HA++     QE+ A   L T+
Sbjct:  398 AASAFCNARAKLDEEVFKLLQVQILQQAKPDPKKLWQGHRLMAVDGSKLNLPRQLIRAGYKTPSDN------AHYPQGTVSCLYELKTKIPIDFDLASHRDERKMAISHLNSLSETDVVVYDRGYYSYDMLHEHDKRHIHPIFRLKTTACRVVEAFANSDDIDAVVQIFPSQSKRTSIPAHDPQPDYPALALRLVKYDAGGTSYILGTTLWDQKKYSIEQLSAVYHSRWGVEELYKISKQLMKVEDFHAQSERGVKQELFAHFNLITL 659          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A6L8GGC8_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GGC8_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 3.440e-16
Identity = 78/264 (29.55%), Postives = 125/264 (47.35%), Query Frame = 2
Query:  182 AIHSARKKLPPGAFKEVNR-FLQRGPHEP-----RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILG---VRARL---------------LKYFISGKTYVCLTNDLS----LSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTIT 889
            A+  AR K+ P  F+E++R  L + P  P     RVF VDG+K+++    + AGY T  ++      A  P  ++S + +++ +   DF L    +ER+AA E L+ +  GD +V+DRGY+S  +L +        V+RLK +A   T  F      + T  I      RARL               L  + +G T   L   L+        D+  +Y +RWR+EE +K  K  L +E   A++    +QE+ A  ++ T T
Sbjct:  379 AMSRARAKVDPEVFRELHREILAQAPDRPLWKGRRVFGVDGAKINLPRPLVEAGYATPGDH------AHYPQGLVSCLYELEPRLPFDFGLHADTSERRAAAEHLKALSAGDVVVYDRGYFSYEMLLAHVVRGQDAVFRLKRDANAETVAFLAGPLDDRTVEIRPDDKARARLKARHPGAAFGPLKLRLVRYAAGDTVFALGTTLAEDDGFGLEDLAAIYRARWRIEEHYKIAKWFLAVESFRAESERGVLQELYANFVMVTAT 636          
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Match: A0A6L8GJ11_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GJ11_9BACT)

HSP 1 Score: 89.7 bits (221), Expect = 8.420e-16
Identity = 88/331 (26.59%), Postives = 145/331 (43.81%), Query Frame = 2
Query:   29 TMLLKSETF*WMQRRRKLRTSSLFYMLTKCCI--QERGVAHILRM-------------ENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEP------RVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRP-AKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILG-------------------VRARLLKYFISGKTYVCLTNDLS---LSRRDIKVMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTIT 889
            T L ++    WM+RRR L +  +   + +  +  +E+G A +                + E   + +I  AR+++    F +++R + R   +       RVFAVDG+K+++    + AGY       P+P+  A  P  ++S +  + TK  VDF L+    ER AA   L  +  GD +VFDRGY+S  LL +V  + A  V+RL+ N     + F     TEA                         V  RL++    G  +   T  L    +S  D+  +Y  RW +EE +K  K  + +++ H +T     QE+ A   L  +T
Sbjct:  335 TALAEAHDRRWMKRRRVLNSLIVMLFVFRLVLSRREKGYATVTAELWEQCRKLGIALPQREPVVASSICKARQRVHEELFLDLHREILRHGGDGARWKGRRVFAVDGTKMNLPRGLVDAGY-------PLPKDGAHYPQGLVSCLYRLDTKVPVDFSLSARACERTAALGHLHALEAGDVVVFDRGYFSFELLHAVIRTGAHPVFRLQANGVAAFRDFMAGDGTEAVVAASPGPDTRRELARRRPGERFDPVDVRLVRCRTGGDGFNLATTLLDADDVSADDLGALYQGRWSIEELYKVSKQTVAVDEFHGRTERGVRQELYAHFNLIAMT 658          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LP60_ECTSI2.560e-24295.70EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
D8LP47_ECTSI1.330e-20689.20EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K772_9PHAE8.820e-18877.90DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
Q8QNB6_ESV1K3.490e-18680.56EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5JA56_9PHAE4.270e-16479.55DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE2.820e-12276.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T1_9PHAE8.600e-4155.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2Z2NHE4_9GAMM7.820e-2230.97Uncharacterized protein n=1 Tax=Granulosicoccus an... [more]
A0A6L8GGC8_9BACT3.440e-1629.55IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]
A0A6L8GJ11_9BACT8.420e-1626.59IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:17694..18801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1046724.KB889834_gene1048
PFAMsDDE_Tnp_1,Nterm_IS4
Model size1108
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categorymitochondrion
Exons1
Evalue5.19e-22
EggNOG OGsCOG3385@1|root,COG3385@2|Bacteria,1MVRM@1224|Proteobacteria,1RRFT@1236|Gammaproteobacteria,464GA@72275|Alteromonadaceae
DescriptionCOG3385 FOG Transposase and inactivated derivatives
Cds size1047
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789708.9955354-CDS-P-littoralis_Contig15:17693..187401680789708.9955354-CDS-P-littoralis_Contig15:17693..18740Pylaiella littoralis U1_48CDSP-littoralis_Contig15 17694..18740 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789709.0047238-UTR-P-littoralis_Contig15:18740..188011680789709.0047238-UTR-P-littoralis_Contig15:18740..18801Pylaiella littoralis U1_48UTRP-littoralis_Contig15 18741..18801 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.2.1prot_P-littoralis_Contig15.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 17694..18740 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.2.1

>prot_P-littoralis_Contig15.2.1 ID=prot_P-littoralis_Contig15.2.1|Name=mRNA_P-littoralis_Contig15.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp
MQRRRKLRTSSLFYMLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLP
PGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPR
PAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVF
DRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTKPFFNSCHTEATCLILGV
RARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESFKRLKSNLK
LEKAHAKTPALYIQEVEARVLLDTITLRLQKSMKEPSYIYTLDTYVTHIL
NNVKRVSNPVKLSAHSEADVFSKKRSRLCHGRIYDHHRHGPIFSDKLT*
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mRNA from alignment at P-littoralis_Contig15:17694..18801-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.2.1 ID=mRNA_P-littoralis_Contig15.2.1|Name=mRNA_P-littoralis_Contig15.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1108bp|location=Sequence derived from alignment at P-littoralis_Contig15:17694..18801- (Pylaiella littoralis U1_48)
ATGACTAAACCGATGTCTCCTGAAATATACGATGCTTTTAAAAAGTGAAA CATTTTAGTGGATGCAGAGACGACGAAAGCTGCGGACATCTTCCCTTTTC TACATGCTCACTAAGTGTTGTATTCAAGAGAGAGGTGTCGCTCACATACT GAGGATGGAAAACGAACAGTACTCGTCTCAGGCGATACATTCGGCCAGGA AGAAGCTTCCACCAGGGGCTTTCAAGGAAGTAAACCGGTTCTTGCAACGA GGACCACATGAACCACGTGTGTTCGCCGTAGATGGTTCGAAAGTGCACGT GCACCCTTCGTTCATCGGGGCTGGATATATGACCCGGACGAACAATAAAC CGGTCCCGCGTCCCGCGAAAAGACCTCTTGTCATGCTTTCTTCGATGGTG GACGTAAAAACAAAAGCGTGTGTGGACTTTGAGCTCACGAAACACTTCAA CGAAAGAAAGGCAGCCACTGAGATGCTCCGAGGTGTACGGAAAGGGGATA CTCTGGTGTTTGACAGAGGCTACTACTCCAAGAACTTGCTGCGAAGCGTT CATGACTCGCATGCGTTTGGGGTTTGGCGACTCAAGATAAATGCGTTCAA AGGCACTAAGCCTTTCTTCAACTCGTGTCACACGGAAGCAACATGCCTTA TTCTTGGTGTCAGGGCGCGTCTCTTGAAGTATTTTATTTCTGGTAAAACA TATGTTTGCCTGACGAACGATCTATCGCTATCTCGGAGGGATATCAAGGT CATGTACGCGTCGAGGTGGCGGGTGGAGGAATCCTTCAAACGATTGAAAT CAAACCTCAAACTTGAGAAAGCACATGCCAAAACTCCGGCTCTTTATATT CAGGAGGTAGAAGCGCGGGTCTTGTTAGACACAATCACACTGAGGTTGCA AAAATCGATGAAGGAACCATCGTATATCTACACACTTGATACATACGTCA CACATATCCTTAACAACGTCAAGAGAGTTTCGAATCCCGTGAAATTGAGC GCACATTCTGAAGCAGATGTGTTCTCCAAGAAGCGAAGTCGCTTGTGCCA TGGTCGCATATATGATCATCATCGCCACGGACCGATTTTTTCAGACAAAC TGACTTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:17694..18801-

>mRNA_P-littoralis_Contig15.2.1 ID=mRNA_P-littoralis_Contig15.2.1|Name=mRNA_P-littoralis_Contig15.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1047bp|location=Sequence derived from alignment at P-littoralis_Contig15:17694..18801- (Pylaiella littoralis U1_48)
ATGCAGAGACGACGAAAGCTGCGGACATCTTCCCTTTTCTACATGCTCAC
TAAGTGTTGTATTCAAGAGAGAGGTGTCGCTCACATACTGAGGATGGAAA
ACGAACAGTACTCGTCTCAGGCGATACATTCGGCCAGGAAGAAGCTTCCA
CCAGGGGCTTTCAAGGAAGTAAACCGGTTCTTGCAACGAGGACCACATGA
ACCACGTGTGTTCGCCGTAGATGGTTCGAAAGTGCACGTGCACCCTTCGT
TCATCGGGGCTGGATATATGACCCGGACGAACAATAAACCGGTCCCGCGT
CCCGCGAAAAGACCTCTTGTCATGCTTTCTTCGATGGTGGACGTAAAAAC
AAAAGCGTGTGTGGACTTTGAGCTCACGAAACACTTCAACGAAAGAAAGG
CAGCCACTGAGATGCTCCGAGGTGTACGGAAAGGGGATACTCTGGTGTTT
GACAGAGGCTACTACTCCAAGAACTTGCTGCGAAGCGTTCATGACTCGCA
TGCGTTTGGGGTTTGGCGACTCAAGATAAATGCGTTCAAAGGCACTAAGC
CTTTCTTCAACTCGTGTCACACGGAAGCAACATGCCTTATTCTTGGTGTC
AGGGCGCGTCTCTTGAAGTATTTTATTTCTGGTAAAACATATGTTTGCCT
GACGAACGATCTATCGCTATCTCGGAGGGATATCAAGGTCATGTACGCGT
CGAGGTGGCGGGTGGAGGAATCCTTCAAACGATTGAAATCAAACCTCAAA
CTTGAGAAAGCACATGCCAAAACTCCGGCTCTTTATATTCAGGAGGTAGA
AGCGCGGGTCTTGTTAGACACAATCACACTGAGGTTGCAAAAATCGATGA
AGGAACCATCGTATATCTACACACTTGATACATACGTCACACATATCCTT
AACAACGTCAAGAGAGTTTCGAATCCCGTGAAATTGAGCGCACATTCTGA
AGCAGATGTGTTCTCCAAGAAGCGAAGTCGCTTGTGCCATGGTCGCATAT
ATGATCATCATCGCCACGGACCGATTTTTTCAGACAAACTGACTTAG
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