mRNA_P-littoralis_Contig15.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI) HSP 1 Score: 1318 bits (3412), Expect = 0.000e+0 Identity = 659/697 (94.55%), Postives = 678/697 (97.27%), Query Frame = 1
Query: 1 VDHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLCLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDKRRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSEGK 2091
+DHLSCRLERRLWE RDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSE ELLRPEWG AM LLSEYRGLFEPLRVKRPPPK+PPEHPKTEEELTGREDFLYNVKARLNDVL+IEA CRKVDFHL+KRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG +MSKKDASNLVRDVRNTRKDMWKSMREPGTE PPKAFSLMPHFSLTRAFVRYDSQSIG LAKSLDF GVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRP+T+KNQTQRTRKVL LNNRYRKGIGVC+KDPWFTDE+LYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSP+TFEASEFKGS+SSISSREYKHQSL RFSA+AEV RRLD+VEYGQAV+AFDSVSLKQPGSSVAYSSVIYCTL VRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTY+Q VRKEQRSSAEPLSPERRKELLKKIRDK+RVVFFGNGQFGHGARG CPRKALIR LGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG+SC V++IDRDTNGSANIGVCGVFQLLGLKRPSFLCR SSEGK
Sbjct: 1 MDHLSCRLERRLWECRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSEKELLRPEWGEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGREDFLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGIKMSKKDASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAKSLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNRYRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPKTFEASEFKGSQSSISSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAFDSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYKQEVRKEQRSSAEPLSPERRKELLKKIRDKKRVVFFGNGQFGHGARGACPRKALIRALGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGQSCSVKFIDRDTNGSANIGVCGVFQLLGLKRPSFLCRKSSEGK 697
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A6H5KAA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA5_9PHAE) HSP 1 Score: 396 bits (1018), Expect = 4.580e-131 Identity = 200/229 (87.34%), Postives = 202/229 (88.21%), Query Frame = 1
Query: 1 VDHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 687
VDHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWG AM DLLSEYRGLFEPLR KRPPPKNPPEHPKTEEELTGREDFLYNVKA LNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS F++ G EMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT
Sbjct: 18 VDHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWGEAMEDLLSEYRGLFEPLRAKRPPPKNPPEHPKTEEELTGREDFLYNVKAMLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKS------FIQDER------------GGIEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLT 228
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA) HSP 1 Score: 364 bits (935), Expect = 2.520e-112 Identity = 250/714 (35.01%), Postives = 362/714 (50.70%), Query Frame = 1
Query: 7 HLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLCLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDN--HIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAE---PLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDE----GRSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2073
H S +E +W++R + F + A + ++ A + A +R F+ + RG L P W M L E R LR P P + P+ E + +NVK + L ++A R + + RRGEIW+ INE + S++ KT+ QR L+E P W DEG E+ +D + R + + R +W + +EPGT PP+ ++++P F L AF+ D+ + L K L G L+T G+++RLWWT FD H +R K+ + R + R+G+ + ++ W D+ Y A + P +V I++DG + V L TL P G ELV++GY +I+ V + +G+F++ PL L + D+ +E +G+DPGQ + VR +T EA++ KGS IS REY++Q+L + R E RR N Y A++++ D S + P +S +Y L E LS +RR FAR RA R + +ARDIA G+ A R E+R SA P+SP RR+ELL K++++ RVVFFGNGQFG GA GP PRKAL+++L +C VVL DE+ TSK C CG L QV GSRVFRCSS DE G C VRY+DRD G NI + GV +L G RP+ L R
Sbjct: 20 HFSWLVEIAMWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGRARVPLGPHWAAGMTSLAREEREALSHLRTPLPNPGRAIDPPQLRE-------YRFNVKNFPHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDEGPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVLSVLGKKLR-KGAGAADDALRT------GRSDRLWWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVT--RRTEAADLKGSDRCISGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSP-RRRELLAKVQERLAGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLAR 713
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA) HSP 1 Score: 345 bits (886), Expect = 3.290e-104 Identity = 256/752 (34.04%), Postives = 371/752 (49.34%), Query Frame = 1
Query: 4 DHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSE-NELLRPEWGGAMRDLLSEYRGLFEPLRVKRPP-----PKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQ--------SIGNLAKSLDFS----------GVSEN-----QVTLKTTGVKCSGKA-------ERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLCLNNRYRKGIGVCSKDPWFTDELLYSAK---RDDPSC----ETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKG-SRSSISSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEG--RSCPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNS 2079
DHL C LER WE R+ +HF I AK + A + + A+ ++ +F+ + RG E ++ L +W GAM L R P RV P + E+L F N+ + VL+ EA R D + + +W+ IN Q + TKE KQ ++I P W +G + K + LVR + TR+ M S R PGT PPK F+L+P L + DS+ ++ N+ SLD G S+ Q L++ V+ KA + WW +F+ H E++ R P + +N + K +G K W L+ DD S + PW VN+I+TDGLQV V LAT +P+ GV +LVKKGY SI++ + ++G+F A + G S ++ D +E+VG+DPGQ +Y A +TS + A +FK +S S+ +++ SL + + RR DN+ Y A+ VS++ PG + AY++ ++ E LS RR + F RA+ R + MAR+I ++ A+RK S E R LL ++RD+ RV FFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTS CC CG+ L QVD SRV++C+S E ++C VR+IDRD N S NIG+CG+ LLG+ RP LCR +
Sbjct: 81 DHLMCYLERLAWERRNGDHFSYVIKTGAKLLQRAGAVQEDDTAINMVEEFIVRPRGREGDQRLHEDWRGAMETALKYVRDRLSPFRVIPPGGFGRVQVDDXXXXXXXEQLDEMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRDIEPPAWIQDGDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLH-EKVRLRMPRRAE-----------VNWKPAKPLGRKGKTAWGGIRCLWGTGWTIEDDLSKHGNKKPPWFVNNITTDGLQVNVTLATKV-VDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSS--AEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAELSGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKVGPESEE------RAALLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCRTA 811
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA) HSP 1 Score: 343 bits (879), Expect = 1.480e-103 Identity = 261/728 (35.85%), Postives = 350/728 (48.08%), Query Frame = 1
Query: 4 DHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENEL-LRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGRED----FLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYD------SQSIGNLA--KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLCLNNRYR-KGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANI---TSPETFEASEFKGSRSSISSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2085
DHL C LER W R DEHF I AK + AA + A ++ F+ + RGS+ + L +W AM L+ R +P RV P + +E R D F N+ VL EA R D + + +W+ IN Q + TK KQ + I P W E T+ K L R V + R + ++ R PGT PPK F+L+P L + D S + G A ++L G+ QV ER WW + + H +++ R P + + K L + GI W + L P PW VN+I+TDGLQV V LAT T +P GV EL++KGYASI+D + ++G+F A + S L+ D IE VG+D GQ +Y A + TSPE F+ K + S+ ++K SL + + E RR DN Y A+ SVS++ PG + AY+++++ V E LS ERR + F RA+ R + MA IA + A+RK P PE R+ LL ++RD RVVFFGN QFGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG L QV+GSRVFRC S EG + C VR+IDRD N S NI +CG+ LLG RP LCR E
Sbjct: 65 DHLMCYLERLAWSRRRDEHFAYVIKTGAKLLQRAAAVQDDAAAAAMVEAFLVRPRGSDGQQQLHEDWWAAMGSGLTYIRNRLQPFRVAPPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDRIDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLH-DKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVTAVIP-GVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFK----KIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCRGVGE 776
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA) HSP 1 Score: 334 bits (857), Expect = 2.150e-100 Identity = 249/720 (34.58%), Postives = 351/720 (48.75%), Query Frame = 1
Query: 4 DHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENEL-LRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGRED----FLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWFDEG-----TEMSKKDASNLVRDVRNTRKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAK----SLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLCLNNRYRKGIGVC--SKDPWFTDELL-YSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 2073
DHL C LER W+ R D+HF I AK + A + A +I F+++ RG++ + L +W AM L+ R +P RV P + +E R D F N+ VLQ+EA R+ + + + +W+ IN Q + TK KQ + I P W E T+ K L R + + R + ++ R PGT PPK F+L+P L + D + I ++ + + G+S Q+ ER WW +F+ H + + R P + + + K L + G C ++ FT++L Y K PW VN+I+TDGLQV V LAT +P GV EL++KGY SI+D ++G+F A + S L+ D IE VG+D GQ +Y A I+S + A +FK + + S+ ++K SL + E RR DN Y A+ VS++ PG + AY+ ++ E LS +RR + F RA+ R + MA IA + A+RK P P+ R+ LL +RD RVVFFGN FGHG+RGP PRKALIR + +L PVVL+DEFRTSK CC CG L QV+GSRVFRC S EG + C VR+IDRD N S NI +CG+ LLG+ RP LCR
Sbjct: 64 DHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGK-VRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP------PWFVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTS--AEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRK-----IGP-EPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 767
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA) HSP 1 Score: 267 bits (683), Expect = 5.430e-74 Identity = 217/717 (30.26%), Postives = 321/717 (44.77%), Query Frame = 1
Query: 7 HLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSENELLRPEWGGAMRDLLSEYRGLFEPLRVKRPPPKNPPEHPKTEEELTGREDFLYNVKARLNDVLQIEAECRKVDFHLQKRRGEIWSEINERQQSIKSS-KTKEGFLKQRHLLQEIPVPPWFDEGTEMSKKDASNLVRDVRNT----RKDMWKSMREPGTEHPPKAFSLMPHFSLTRAFVRYDSQSIGNLAKSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSE------------------RIVNRRPNTKKNQTQRTRKVLCLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNHIEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSISSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAF--DSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYRQAVRKEQRSSA---EPLSPERRKELLKKIRDK---------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRSCPVRYIDRDTNGSANIGVCGVFQLLG 2046
HLS +E W++R + F + A + ++ A + A +R F+ + RG L P W M L E R LR P P + P+ E + +N+K + L + A R + + RRGEIW+ INE + S++ KT+ QR L+ P W DEG E+ +D R + + R +W + +EPGT PP+ ++++P F L AFV D++ + L L + G + +++RLWWT FD H +R K+ + R + R G+ + ++ W D+ Y A + P +V I++DG + V L TL P G ELV++GY +I+ V + +G+F++ PL P+ ++ LD G + + E A++ KGS IS REY++QSL + R E RR N Y A++ + D S + PG +S +Y L E LS +RR FAR RA R + +ARDIA G+ A R E+R SA P+SP RR+ELL +R++ R+VFFGNGQFG GA G PRKAL++ L +C VVL DE+ TSK G G C VRY+DRD G NI V + +G
Sbjct: 193 HLSWLVEIATWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGRARLPLGPHWAAGMASLAREEREARSHLRTPLPNPGRERDAPQLRE-------YRFNIKNFPHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDEGPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVLSVLGTKL-------RKAAGAADGALRTRRSDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRARRAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRR-PPPHLVRCITSDGERCHVTLQTLVAARPA--GAPELVREGYDAIRGTCVVGRDRRGLFRDVAPL----------PEELLDC--LDAGDRACFV---------EAIGAADLKGSDRCISGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSP-RRRELLANVRERLAGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTSKTYEDSGA-------------------GGRCSVRYLDRDCAGGGNIANDRVDEEVG 851
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA) HSP 1 Score: 201 bits (512), Expect = 5.800e-54 Identity = 167/465 (35.91%), Postives = 221/465 (47.53%), Query Frame = 1
Query: 733 KSLDFSGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPNTKKNQTQRTRKVLCLNNRYRKGIGVCSKDPWFTDELLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPETFEASEFKGSRSSI-SSREYKHQSLIRFSARAEVRRRLDNVEYGQAVKAFDSVSLKQPGSSVAYSSVIYCTLGVRVVELLSEERRLQKFARLRARQRTVDGM-ARDIAFGNTYRQAVRKEQRSSAEPLSPERRKELLKKIRDK--------RRVVFFGNGQFGHGARGPCPRKALIRELGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGRS--CPVRYIDRDTNGSANIGVCGVFQLLGLKRPSFLCRNSSE 2085
++L GV QV ER WW + + H +++ R P + + K L + G G+ S W + R+ PW+VN+I+TDGLQV V LAT +P GV EL++KGY SI D + ++G+F A + S L+ D IE VG+D GQ +Y A I+S + E FK + + S+ ++K SL +A + F+ + L EE QKF R +G A DI G T A+RK P PE R+ LL ++RD RVVFFGN QFGHG+RGP PRKALIR + +L PVVL++EFRTSK CC CG L QV+GSRVFRC S EG + C VR+IDRD N S NI +CG+ LLG RP LCR + E
Sbjct: 45 RALQQEGVRSRQVRKDWKTRLTGDMTERGWWLCMLNLH-DKVRVRVPRGAERSGEARMKPLGRKGKLAWG-GIRSL--WGQRWTIEGDLREYGHKAPPWLVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSINDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSSE--NFKKIQPAFRSASDHKFLSL------------------SKAWRKFEGEAF------------------------LGEE--TQKF-------RCQEGEDAGDIEDGGTAA-ALRK-----IGP-EPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMNEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPQHLCRGAGE 444 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.1.1 >prot_P-littoralis_Contig15.1.1 ID=prot_P-littoralis_Contig15.1.1|Name=mRNA_P-littoralis_Contig15.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=698bp VDHLSCRLERRLWEFRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKback to top mRNA from alignment at P-littoralis_Contig15:14851..16944- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.1.1 ID=mRNA_P-littoralis_Contig15.1.1|Name=mRNA_P-littoralis_Contig15.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2094bp|location=Sequence derived from alignment at P-littoralis_Contig15:14851..16944- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:14851..16944- >mRNA_P-littoralis_Contig15.1.1 ID=mRNA_P-littoralis_Contig15.1.1|Name=mRNA_P-littoralis_Contig15.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2094bp|location=Sequence derived from alignment at P-littoralis_Contig15:14851..16944- (Pylaiella littoralis U1_48)back to top |