prot_P-littoralis_Contig1497.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1497.1.1
Unique Nameprot_P-littoralis_Contig1497.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
BLAST of mRNA_P-littoralis_Contig1497.1.1 vs. uniprot
Match: A0A6H5JZH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH6_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 4.040e-9
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   13 VEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVSHQSAS--TQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARV 94
            VE+ +P  L  D+ RAVPL S AG+G G+E YME VS  S +  T RYRM+  +   ARS  V +S  P   F +  PA   ++
Sbjct:  148 VEYDVPNVLPVDENRAVPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVDSARSNLVFMSKRPQDAFVDCRPAKMRKI 231          
BLAST of mRNA_P-littoralis_Contig1497.1.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 5.130e-8
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 0
Query:   13 VEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVSHQSAS--TQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARV 94
            VE+ +P  L  D+ RA+PL S AG+G G+E YME VS  S +  T RYRM+  + + A S  V++S  P   F +  PA   ++
Sbjct:  478 VEYDVPNVLPVDENRAIPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVEGALSKLVVMSKRPQDAFVDCRPAKMRKI 561          
BLAST of mRNA_P-littoralis_Contig1497.1.1 vs. uniprot
Match: A0A6H5K6V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V5_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 9.250e-7
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   13 VEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVS--HQSASTQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDP 88
            VE+ +      D+ +AVPL S AG+G G+E YME VS  ++++ ++RYRM+  + + ARS  V+IS  P   F +  P
Sbjct:   43 VEYDVHNVFPVDENKAVPLTSPAGLGQGIERYMEEVSRAYRTSLSRRYRMRRDVGESARSNLVVISKRPQDAFVDCRP 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1497.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZH6_9PHAE4.040e-942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFD4_9PHAE5.130e-840.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6V5_9PHAE9.250e-739.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1497contigP-littoralis_Contig1497:99..473 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1497.1.1mRNA_P-littoralis_Contig1497.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1497 97..2689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1497.1.1 ID=prot_P-littoralis_Contig1497.1.1|Name=mRNA_P-littoralis_Contig1497.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MELVDPSGTDEEVEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVSH
QSASTQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARVQTATLS
KEDKLRAPLKKKLVCHRDTCPARI*
back to top