prot_P-littoralis_Contig1496.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1496.3.1
Unique Name	prot_P-littoralis_Contig1496.3.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	340

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig1496.3.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.260e-6
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:   83 SGCAHRGCTKRPSYGVAGTKTAEFCSGHAKDGMVRVSDSR 122
            S C H  CTKRP+YGVAG+K  EFCS HA+DGMV V++ R
Sbjct:   62 SQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 101

[Close]

BLAST of mRNA_P-littoralis_Contig1496.3.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.290e-6
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:   83 SGCAHRGCTKRPSYGVAGTKTAEFCSGHAKDGMVRVSDSR 122
            S C H  CTKRP+YGVAG+K  EFCS HA+DGMV V++ R
Sbjct:    2 SQCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 41

[Close]

BLAST of mRNA_P-littoralis_Contig1496.3.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 4.810e-5
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0

Query:   85 CAHRGCTKRPSYGVAGTKTAEFCSGHAKDGMV 116
            CAH  C K P+YGV GT+ AEFC+ HA DGMV
Sbjct:   17 CAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48

[Close]

BLAST of mRNA_P-littoralis_Contig1496.3.1 vs. uniprot
Match: A0A6H5JW94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW94_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 6.890e-5
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 0

Query:   85 CAHRGCTKRPSYGVAGTKTAEFCSGHAKDGMVRV 118
            C H GCTK+PS+G AG+K AEFC  HAK  MV V
Sbjct:    9 CGHPGCTKKPSFGTAGSKRAEFCCPHAKQDMVIV 42

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1496.3.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1496.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5JT00_9PHAE	1.260e-6	65.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FI73_ECTSI	1.290e-6	65.00	EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5LBM3_9PHAE	4.810e-5	65.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JW94_9PHAE	6.890e-5	64.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043822	EsV-1-7 cysteine-rich motif	PFAM	PF19114	EsV_1_7_cys	coord: 85..118 e-value: 3.2E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..318

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1496	contig	P-littoralis_Contig1496:8050..13397 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1496.3.1	mRNA_P-littoralis_Contig1496.3.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1496 8020..14591 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1496.3.1 ID=prot_P-littoralis_Contig1496.3.1|Name=mRNA_P-littoralis_Contig1496.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp
MVDVFHKRCAHVAAPSSRAMASQVPRRRSSALDTPRMEWWTSSASSVPTL
AAPSTRAMAWQVPRRRSSALDTPRMEWWTSSTSGCAHRGCTKRPSYGVAG
TKTAEFCSGHAKDGMVRVSDSRNPCSVRGRSGGARGCGGAEMDGCTARRS
GAGENKRRRSLVDTRQAEPSSESSSRSSRADSKRSRQATVNTPVTPPTSI
GGTAEDETHAAPDANISVSEPDDAAVKTEVATVSSKVVAIEVLPAVETTA
GESATSVGYNLCAERDGSVKTEVGIVFPSKLAAPGVATSPLSVDGGAYPR
RVGRHVSRDRRERHSGVAQNVGHPRGVDGAPLLGGAARP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043822	EsV_1_7_cys