mRNA_P-littoralis_Contig1495.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1495.4.1
Unique NamemRNA_P-littoralis_Contig1495.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 6.970e-54
Identity = 120/308 (38.96%), Postives = 172/308 (55.84%), Query Frame = 1
Query:   22 DSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQG-HTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKN--VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            D+G++ H+  ++     Y  C++ +RVA+G    I G GD+ V   S      + L  VAH P   Y L+SL +    G  T   +   + +    G+ +  P  GNL+   G+R  +  E  CA +APG     +  VDIN +H +  H+HE+LLR +A QQG  L    +L  C+GCS AKG+S PI   T+ R+ KKL RVFVDL+GK  V+S+GGK Y++I +DD TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E T A     NGVAER
Sbjct:  372 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFR--THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLV--GELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAER 675          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 7.020e-54
Identity = 120/308 (38.96%), Postives = 172/308 (55.84%), Query Frame = 1
Query:   22 DSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQG-HTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKN--VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            D+G++ H+  ++     Y  C++ +RVA+G    I G GD+ V   S      + L  VAH P   Y L+SL +    G  T   +   + +    G+ +  P  GNL+   G+R  +  E  CA +APG     +  VDIN +H +  H+HE+LLR +A QQG  L    +L  C+GCS AKG+S PI   T+ R+ KKL RVFVDL+GK  V+S+GGK Y++I +DD TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E T A     NGVAER
Sbjct:  385 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFR--THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLV--GELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAER 688          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 7.070e-54
Identity = 120/308 (38.96%), Postives = 172/308 (55.84%), Query Frame = 1
Query:   22 DSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQG-HTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKN--VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            D+G++ H+  ++     Y  C++ +RVA+G    I G GD+ V   S      + L  VAH P   Y L+SL +    G  T   +   + +    G+ +  P  GNL+   G+R  +  E  CA +APG     +  VDIN +H +  H+HE+LLR +A QQG  L    +L  C+GCS AKG+S PI   T+ R+ KKL RVFVDL+GK  V+S+GGK Y++I +DD TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E T A     NGVAER
Sbjct:  528 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFR--THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLV--GELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAER 831          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5L8P7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P7_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.040e-48
Identity = 111/294 (37.76%), Postives = 164/294 (55.78%), Query Frame = 1
Query:   22 DSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQGHTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKN--VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECT 879
            D+G++ H+  ++     Y  C++ +RVA+G    I G GD+ V   S      + L  VAH P   Y L+SL +    G      ++      + G+++  P   NL+   G+R  +  E  CA +APG     +  VDIN +H +  H+HE+LLR +A QQG  L    +L  C+GCS AKG+S PI   T+ R+ KKL RVFVDL+GK  V+S+GGK Y++I +DD TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E T
Sbjct:  192 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKYDLELERGGESVRFPRYSNLYVQNGFR--THTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLV--GELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFT 481          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.660e-47
Identity = 111/306 (36.27%), Postives = 167/306 (54.58%), Query Frame = 1
Query:   22 DSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQG-HTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKNVDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            D+G++ H+  ++     Y  C++ +RVA+G    I G GD+ V   S      + L  VAH P   Y L+SL +    G  T   +   + +    G+++ +P  GNL+   G R  +E   T       + S+  V+IN +H +  H+HE+LLR +A QQG  L    +L  C+GCS AKG+S  I   T+ R+ K+L RVF+DL+GK  V+S+ GK Y++I +D  TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E T A     NGVAER
Sbjct:  398 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRGGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVYSPRCGNLYVHNGCRTHTEHAYTAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLV--GELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAER 701          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.880e-46
Identity = 116/314 (36.94%), Postives = 170/314 (54.14%), Query Frame = 1
Query:    7 EGWCFDSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQGHTYN--GDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSE-IEQTCAVLAPGRLSTKN-VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTP---KIIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            E W  D+G++ H++   + M + +PC+K ++   G    IE  G L + F +   Q  V+L +V ++P   Y L S P+    G ++N  G   G+ M   +G      L G L  +  YRL +  +    A L P     ++ +D+N +H   AH+HE LLR +A + G+ L    K+  C GCS++K     I   T CRS+KKLGRVFVDL G++ V S+GGK Y +I +DD TR +W YFL++K +A  AF  FL  V   G P   +I+R+D+  E  GG    +C +  IK+E T A     NGVAER
Sbjct:  429 EDWYADTGTAFHMTDRLSCMKDLKPCHKNVKGIGGVTCEIEFSGTLELVFVTADSQFPVELENVLYSPNLGYNLFS-PSAEFDGESWNYLGGPDGV-MTAFNGHVTFQNLDGML-ISPAYRLENNCVGSVLAALTPSNPKHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELT--GKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 737          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5KUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV5_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 8.740e-46
Identity = 112/291 (38.49%), Postives = 160/291 (54.98%), Query Frame = 1
Query:   73 YRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQG-HTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKN--VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            Y  C++ +RVA+G    I G GD+ V   S      + L  VAH P   Y L+SL +    G  T       + +    G+++  P  GNL+   G R  +E       +APG     +  VDIN +H +  H+HE+LLR +A QQG +L    +LL C+GCS AKG+S PI   T+ R+ K L RVFVDL+GK   +S+GGK Y++I +DD TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E + A     NGVA+R
Sbjct:   11 YEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLKKHDLELERVGGESVHFPRCGNLYVRNGSRTHNE--HASPTIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTMLV--GELLECLGCSTAKGLSTPIPNKTSTRAAK-LQRVFVDLSGKTRAQSLGGKWYTLIVKDDFTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVMVVRSDNGGEFFYGEFGRVCRKYCIKQEFSPAHSPEYNGVADR 296          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 4.340e-45
Identity = 115/314 (36.62%), Postives = 165/314 (52.55%), Query Frame = 1
Query:    7 EGWCFDSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQGHTYNG--DSRGITMHLKSGQTLLAPLVGNLHYAYGYRLG-SEIEQTCAVLAPGRLSTKN-VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTP---KIIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            E W  D+G++ H++     M + +PC+K +    G    I   G L + F +   +  V+L +V ++P   Y L S P+    G ++NG     G+    K GQ       G L  A  YRLG + +    A L P     K  +D+N +H   AH+H+ LLR +A + G  L    ++  C GCS+AK +   I + T  RS+KKLGRVFVDL G++ V S+GGK Y +I +DD TR +W YFL+ K +A  AF  FL  V   G P   +I+R+D+  E  GG    +C +  IK+E T A     NGVAER
Sbjct:  230 EDWYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSVELKNVLYSPNLGYNLFS-PSAEFDGESWNGLGGPDGVMTAFK-GQVTFQNFDGML-IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELV--GEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 538          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.070e-44
Identity = 114/314 (36.31%), Postives = 165/314 (52.55%), Query Frame = 1
Query:    7 EGWCFDSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQGHTYNG--DSRGITMHLKSGQTLLAPLVGNLHYAYGYRLG-SEIEQTCAVLAPGRLSTKN-VDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTP---KIIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAER 918
            E W  D+G++ H++     M + +PC+K +    G    I   G L + F +   +  ++L +V ++P   Y L S P+    G ++NG     G+    K GQ       G L  A  YRLG + +    A L P     K  +D+N +H   AH+H+ LLR +A + G  L    ++  C GCS+AK +   I + T  RS+KKLGRVFVDL G++ V S+GGK Y +I +DD TR +W YFL+ K +A  AF  FL  V   G P   +I+R+D+  E  GG    +C +  IK+E T A     NGVAER
Sbjct:  523 EDWYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSMELKNVLYSPNLGYNLFS-PSAEFDGESWNGLGGPDGVMTAFK-GQVTFQNFDGML-IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELV--GEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 831          
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 3.010e-43
Identity = 117/297 (39.39%), Postives = 159/297 (53.54%), Query Frame = 1
Query:   52 DATKMTNYRPCNKFLRVASGAQL-RIEGRGDLLVDFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQGHTYNGDSRGITMHLKSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPG--RLSTKNVDINAYHRSTAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACRSEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAVEAFEQFLTDV---GTPK---IIRTDDARELIGGPVKELCRKNRIKRECTTADRAPLNGVAE 915
            DA     Y  C++ +RVA+G  L  I G GD+ V  +S      + L  VAH P                    G   G       G+++  P  GNL+   G+R  +  E   A +APG  R S+ +VDIN  H +  H+HELLLR  A QQG +L    +L  C+GC  AKG+S PI KT+  R+ KKL RVFVDL+GK  V+S+GGK Y++I +DD TR +  YFL+ K +A EAFE++L +    G P    ++R+D+  E   G    +CRK  IK+E T A     NGVAE
Sbjct:  839 DADGFVRYEECDRRVRVAAGETLFPIVGYGDVTVTLRSRDGTTDLLLKRVAHVPRLGI----------------GGREG-------GESVSFPRCGNLYVQNGFR--THTEHAYAAIAPGNARTSSASVDINDVHVAHGHSHELLLRTMAKQQGTMLL--GELPECLGCLTAKGLSKPIPKTST-RAAKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAE 1107          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1495.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZQ8_9PHAE6.970e-5438.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE7.020e-5438.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE7.070e-5438.96Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5L8P7_9PHAE1.040e-4837.76Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JXF7_9PHAE1.660e-4736.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE1.880e-4636.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUV5_9PHAE8.740e-4638.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE4.340e-4536.62Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE1.070e-4436.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K583_9PHAE3.010e-4339.39Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1495contigP-littoralis_Contig1495:8612..9529 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7260.FBpp0244144
PFAMsDUF4219,MBD,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size918
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.04e-22
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3BI7U@33208|Metazoa,3CTS1@33213|Bilateria,41WYJ@6656|Arthropoda,3SH01@50557|Insecta,457GT@7147|Diptera,45YIF@7214|Drosophilidae
DescriptionPfam:UBN2_2
Cds size918
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789707.1172962-CDS-P-littoralis_Contig1495:8611..95291680789707.1172962-CDS-P-littoralis_Contig1495:8611..9529Pylaiella littoralis U1_48CDSP-littoralis_Contig1495 8612..9529 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1495.4.1prot_P-littoralis_Contig1495.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1495 8612..9529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1495.4.1

>prot_P-littoralis_Contig1495.4.1 ID=prot_P-littoralis_Contig1495.4.1|Name=mRNA_P-littoralis_Contig1495.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=306bp
GKEGWCFDSGSSGHVSFDATKMTNYRPCNKFLRVASGAQLRIEGRGDLLV
DFQSGPRQVRVKLMSVAHAPTASYRLLSLPACVKQGHTYNGDSRGITMHL
KSGQTLLAPLVGNLHYAYGYRLGSEIEQTCAVLAPGRLSTKNVDINAYHR
STAHTHELLLRKSAAQQGVVLEKGSKLLPCVGCSLAKGISAPIHKTTACR
SEKKLGRVFVDLTGKQPVKSIGGKQYSIIFRDDKTRMSWEYFLRTKDEAV
EAFEQFLTDVGTPKIIRTDDARELIGGPVKELCRKNRIKRECTTADRAPL
NGVAER
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mRNA from alignment at P-littoralis_Contig1495:8612..9529+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1495.4.1 ID=mRNA_P-littoralis_Contig1495.4.1|Name=mRNA_P-littoralis_Contig1495.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig1495:8612..9529+ (Pylaiella littoralis U1_48)
GGAAAAGAGGGTTGGTGTTTTGACAGTGGGTCGTCTGGCCACGTATCATT CGACGCCACTAAGATGACTAACTACCGCCCTTGTAACAAGTTTCTACGTG TCGCCAGCGGCGCACAACTTCGGATTGAGGGTCGAGGTGACCTACTTGTA GACTTTCAATCTGGCCCGAGACAGGTGCGTGTAAAACTCATGAGCGTTGC CCACGCACCTACCGCAAGCTACCGTCTTCTCTCACTGCCCGCTTGTGTCA AGCAAGGTCACACGTACAACGGCGACAGTAGGGGCATCACAATGCACCTC AAGTCTGGCCAAACGCTGCTAGCCCCTCTGGTGGGAAATTTGCACTACGC ATACGGGTACAGACTTGGTAGTGAGATCGAACAAACCTGCGCCGTACTTG CCCCCGGGCGTTTGTCTACCAAAAATGTGGACATTAACGCCTACCACCGC TCCACTGCCCACACCCACGAATTGTTGCTGAGGAAATCTGCGGCGCAACA AGGCGTGGTGCTCGAGAAGGGGAGCAAGCTACTGCCATGCGTGGGGTGCT CGTTGGCGAAGGGCATCAGCGCACCAATTCACAAGACCACTGCTTGCAGA TCAGAGAAGAAACTGGGAAGAGTTTTTGTCGATCTCACAGGCAAGCAACC CGTAAAATCCATCGGGGGGAAGCAGTATTCTATAATCTTCCGCGACGACA AAACTCGGATGTCGTGGGAATACTTCCTGCGCACCAAGGACGAAGCTGTT GAGGCGTTTGAGCAATTCTTGACTGATGTGGGCACACCGAAGATCATTCG GACTGATGATGCTCGTGAGCTAATCGGGGGTCCGGTCAAGGAGTTATGCA GGAAGAACCGAATCAAGCGAGAGTGTACCACCGCCGATCGGGCTCCACTT AACGGTGTAGCAGAGCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1495:8612..9529+

>mRNA_P-littoralis_Contig1495.4.1 ID=mRNA_P-littoralis_Contig1495.4.1|Name=mRNA_P-littoralis_Contig1495.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig1495:8612..9529+ (Pylaiella littoralis U1_48)
GGAAAAGAGGGTTGGTGTTTTGACAGTGGGTCGTCTGGCCACGTATCATT
CGACGCCACTAAGATGACTAACTACCGCCCTTGTAACAAGTTTCTACGTG
TCGCCAGCGGCGCACAACTTCGGATTGAGGGTCGAGGTGACCTACTTGTA
GACTTTCAATCTGGCCCGAGACAGGTGCGTGTAAAACTCATGAGCGTTGC
CCACGCACCTACCGCAAGCTACCGTCTTCTCTCACTGCCCGCTTGTGTCA
AGCAAGGTCACACGTACAACGGCGACAGTAGGGGCATCACAATGCACCTC
AAGTCTGGCCAAACGCTGCTAGCCCCTCTGGTGGGAAATTTGCACTACGC
ATACGGGTACAGACTTGGTAGTGAGATCGAACAAACCTGCGCCGTACTTG
CCCCCGGGCGTTTGTCTACCAAAAATGTGGACATTAACGCCTACCACCGC
TCCACTGCCCACACCCACGAATTGTTGCTGAGGAAATCTGCGGCGCAACA
AGGCGTGGTGCTCGAGAAGGGGAGCAAGCTACTGCCATGCGTGGGGTGCT
CGTTGGCGAAGGGCATCAGCGCACCAATTCACAAGACCACTGCTTGCAGA
TCAGAGAAGAAACTGGGAAGAGTTTTTGTCGATCTCACAGGCAAGCAACC
CGTAAAATCCATCGGGGGGAAGCAGTATTCTATAATCTTCCGCGACGACA
AAACTCGGATGTCGTGGGAATACTTCCTGCGCACCAAGGACGAAGCTGTT
GAGGCGTTTGAGCAATTCTTGACTGATGTGGGCACACCGAAGATCATTCG
GACTGATGATGCTCGTGAGCTAATCGGGGGTCCGGTCAAGGAGTTATGCA
GGAAGAACCGAATCAAGCGAGAGTGTACCACCGCCGATCGGGCTCCACTT
AACGGTGTAGCAGAGCGG
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