prot_P-littoralis_Contig1495.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1495.1.1
Unique Nameprot_P-littoralis_Contig1495.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: D7FWM8_ECTSI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM8_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 3.140e-50
Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLEMTQKP 86
            MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDY GT KTREWLVTLNAMRAA+ELSEDQARQLLHDLDTSYS FFRYLEMTQKP
Sbjct:  148 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYEGTQKTREWLVTLNAMRAADELSEDQARQLLHDLDTSYSAFFRYLEMTQKP 233          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A6S9EJI3_HETAK (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EJI3_HETAK)

HSP 1 Score: 115 bits (289), Expect = 3.370e-30
Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 81
            MDALKLEQRAVDEVQPL+ D+ DRL ++  LP D+A T K   WL  LN +RAA+EL EDQARQLLHDLD +YSGFFR+LE
Sbjct:  156 MDALKLEQRAVDEVQPLVADVMDRLTRLAALPADFAPTQKIEAWLKELNGLRAADELGEDQARQLLHDLDAAYSGFFRFLE 236          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A836CDG2_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.260e-28
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 80
            MDALKL+QRAVDEVQPLI D+ DRLNK +GLP  + G    R WL+T N +RA+++L ++Q RQLLHDLD SYS FFR+L
Sbjct:  160 MDALKLDQRAVDEVQPLISDVMDRLNKCEGLPEGFEGVKTMRAWLITFNGLRASDQLDDEQVRQLLHDLDVSYSAFFRFL 239          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A7S1FP92_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP92_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.070e-24
Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 81
            MDALKL+QRAVDEVQPL+ DL D L +V GLP ++      + WL+ LNAMRA +E+ EDQARQL  +LDT+Y+GF R+L+
Sbjct:  139 MDALKLDQRAVDEVQPLLSDLMDSLTRVSGLPANFDPVDMLKRWLIKLNAMRAVDEIDEDQARQLSFELDTAYAGFHRFLK 219          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: B7FWQ6_PHATC (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWQ6_PHATC)

HSP 1 Score: 99.8 bits (247), Expect = 2.560e-24
Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 81
            MDA+KLEQRAVDE+QPL+ DL D L +V   PND+   H+ ++WL  LN MRA +E+ ED +RQL HDLD +Y+ F RYL+
Sbjct:  120 MDAVKLEQRAVDELQPLLSDLLDALTRVPDTPNDFEPNHRIQKWLQKLNGMRAVDEIDEDDSRQLYHDLDAAYTEFTRYLK 200          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A812XGV8_SYMMI (Vps28 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XGV8_SYMMI)

HSP 1 Score: 99.0 bits (245), Expect = 2.020e-23
Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 80
            MDALKLEQRAVDEVQPL+ +L   L +V GLP D+ G  K R WL  LN MRA EELS+++ARQL+ DL+ +YS F RYL
Sbjct:  181 MDALKLEQRAVDEVQPLLAELMSALTRVAGLPADFEGLVKMRLWLQKLNQMRAVEELSDEEARQLIFDLEGAYSAFHRYL 260          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A6V2IMC3_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IMC3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.310e-23
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 81
            MDA+KLEQRAVDE+QPL+ DL D L ++   PND+    K + WL TLN+MRA +++ ED ARQL HDLD++Y+ F R+L+
Sbjct:  137 MDAVKLEQRAVDELQPLLSDLMDALTQLPETPNDFEPNKKVQTWLQTLNSMRAVDQIDEDDARQLYHDLDSAYADFTRHLK 217          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: W7T9L8_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9L8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.710e-23
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLE 81
            MD ++LEQRAVDE+QP++ D+   L +V GLP ++ G+ K  EWLVTLNAMRA + ++E+QARQLL DLD  YS F  +L+
Sbjct:  158 MDGVRLEQRAVDELQPMLTDIMTSLRRVQGLPAEFLGSKKLEEWLVTLNAMRAMDAITEEQARQLLFDLDQGYSSFHAWLK 238          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: A0A482RPG3_9ARCH (VPS28 C-terminal domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPG3_9ARCH)

HSP 1 Score: 92.4 bits (228), Expect = 1.290e-22
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYLEM 82
            MDA+KL QRA+DE+ PL+ DLS  L K+  LP D+ G+ KT+ WL  LN++RA +ELSE+  RQLL DL+T+YS F + L M
Sbjct:   16 MDAVKLGQRAIDELHPLLSDLSSSLTKLHFLPADFEGSVKTKGWLAKLNSLRAVDELSEEDIRQLLFDLETNYSAFHKLLGM 97          
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Match: K0TBW8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBW8_THAOC)

HSP 1 Score: 98.2 bits (243), Expect = 1.310e-22
Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNAMRAAEELSEDQARQLLHDLDTSYSGFFRYL 80
            MDA+KL+QRAVDE+QPL+ DL   L ++  +PND+A  HK R WL  LN MRA + + ED +RQL HDLD+SY+ F RYL
Sbjct:  259 MDAVKLDQRAVDELQPLLSDLMSALTQLPDVPNDFAPNHKVRRWLEKLNGMRAVDIIDEDDSRQLYHDLDSSYTEFERYL 338          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1495.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM8_ECTSI3.140e-5095.35Vacuolar protein sorting-associated protein 28 hom... [more]
A0A6S9EJI3_HETAK3.370e-3069.14Vacuolar protein sorting-associated protein 28 hom... [more]
A0A836CDG2_9STRA2.260e-2863.75Vacuolar protein sorting-associated protein 28 hom... [more]
A0A7S1FP92_9STRA1.070e-2459.26Vacuolar protein sorting-associated protein 28 hom... [more]
B7FWQ6_PHATC2.560e-2456.79Vacuolar protein sorting-associated protein 28 hom... [more]
A0A812XGV8_SYMMI2.020e-2362.50Vps28 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A6V2IMC3_9STRA4.310e-2355.56Vacuolar protein sorting-associated protein 28 hom... [more]
W7T9L8_9STRA6.710e-2355.56Vacuolar protein sorting-associated protein 28 hom... [more]
A0A482RPG3_9ARCH1.290e-2254.88VPS28 C-terminal domain-containing protein n=1 Tax... [more]
K0TBW8_THAOC1.310e-2257.50Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 1..80
e-value: 8.0E-26
score: 90.9
IPR007143Vacuolar protein sorting-associated Vps28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28coord: 1..81
IPR037206VPS28, C-terminal domain superfamilyGENE3D1.20.120.1130coord: 1..82
e-value: 9.6E-28
score: 98.1
IPR037206VPS28, C-terminal domain superfamilySUPERFAMILY140427VPS28 C-terminal domain-likecoord: 1..80
NoneNo IPR availablePANTHERPTHR12937:SF0VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOGcoord: 1..81
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalPROSITEPS51310VPS28_Ccoord: 1..81
score: 32.729809

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1495contigP-littoralis_Contig1495:2917..3607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1495.1.1mRNA_P-littoralis_Contig1495.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1495 982..4226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1495.1.1 ID=prot_P-littoralis_Contig1495.1.1|Name=mRNA_P-littoralis_Contig1495.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYAGTHKTREWLVTLNA
MRAAEELSEDQARQLLHDLDTSYSGFFRYLEMTQKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007143Vps28
IPR037206VPS28_C_sf
IPR017899VPS28_C