mRNA_P-littoralis_Contig149.104.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 461 bits (1186), Expect = 7.760e-157 Identity = 220/298 (73.83%), Postives = 247/298 (82.89%), Query Frame = 2
Query: 170 AFRDGVSLAELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLENAFERSPELWSDPIGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFAAGSGGGTP 1063
AF + V+LAEL V+PF+ GGFC+ICSC+YRG+ AVLK KP ++S A LL EISIYRQIS G HPN+ RAFGAG HVQ GE+ P+PFLLLE+L GGTLENAFERS +WSDPIGRLPVAIELAEA+ FLH +A+PGGVV+HRDLKPSNIGLCG GH+K+FDLGLSVVR V A + YE+ GMAGSKRFMAPE CTGL YNEKVDVYSFALVLWQICALRKPFAGM+ ADHY VVQGGLRPPLDARW PQLVHLLQACWHVHP+ RP+M+Q R+ LRQIFA G GG P
Sbjct: 6 AFNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERSTAVWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMGGGGYAP 303
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 339 bits (869), Expect = 1.680e-108 Identity = 175/304 (57.57%), Postives = 215/304 (70.72%), Query Frame = 2
Query: 173 FRDGVSLAELTAVQPFASGGFCIICSCVYRG-RPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLENAFERSPEL---------WSDPIGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVS-GAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFAAGSG 1051
F+D +SL LT +QP GGFCI+CSC Y G + AVLK KP N A LL EI+IY++IS G HPN+ A GAGF GE PFL+LE+L+GG+L A E S L W D + RLPVA+ELA+A+ +LH A+PG ++HRDLKP+NIGLC +GHVK+FD GLSVV+ V G + Y++ GMAGSKRFM+PE C GLPYNEKVDVYSFA+VLW+IC LRKPFAGM+ ADHYR+V+ GGLRPPLD RW L HLLQACWH P+ RPS+ + R++L+QIF AG G
Sbjct: 47 FQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGP----NSAAADLLAEIAIYKRISARGGHPNIAAALGAGF-TSRGE----PFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALPG-FILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAGGG 340
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 209 bits (533), Expect = 4.600e-58 Identity = 112/293 (38.23%), Postives = 165/293 (56.31%), Query Frame = 2
Query: 197 ELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLENAFERSPELWSDPIG--------------RLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQI 1033
+L ++ A+GG+C + +C+ G +K P ++ D AV L EI I +++ HP++ +GAG GE PFL+LE+L L + S + RL ++L + + +LH ++PGG V+HRDLKPSNIG+ G +K+FD GL+ +R + Y + G GS+RFMAPE G+PYNEK D+YS+ +VLW++CAL+KPFAGM++ +H R V + G+RPPLD RW +L LL++CWH E RP Q E L +I
Sbjct: 80 DLVILEHIANGGYCTVLACMLHGEKRAVKI--PLATCSDPEGAVADLTNEIRILKRLR----HPHLCSVYGAGGWRAEGE---LPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARI 363
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 195 bits (495), Expect = 3.100e-52 Identity = 118/315 (37.46%), Postives = 160/315 (50.79%), Query Frame = 2
Query: 197 ELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGF-------------------HVQHGESMPTPFLLLEKLDGGTL-ENAFERSP--------------ELWSDPIGR-LPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLS-VVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQI 1033
EL VQ +GG C I + +RGR V+K P A L TEI I +++ HPN+V GAGF + + F+LLE L GGTL E+ R+P + W P + + A++LA A+ +LHG A+ G V+HRDLKP NI G G +KLFD GL+ +VR G S YE+ G GS R+M PE LPYNEK DVYSF L+LW++ +LR+PF G+ + + V++GG RPPL W L L++ CW + RP +V + L QI
Sbjct: 44 ELRDVQYLTNGGMCSIYTAEWRGRRVVVKM--PRDDCAQPEVARKDLETEIDILQRLQ----HPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQI 352
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.190e-48 Identity = 108/299 (36.12%), Postives = 159/299 (53.18%), Query Frame = 2
Query: 194 AELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLENAF-------ERSPELWSDP----IGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLS-VVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFAAGSGG 1054
A+L V+ GG I + V GRP V+KT KP + A+N + E+ I+ ++ DH N+ GAG S F++LE+LDGGTL +R W + + A +A+A+ + H A+PG + +HRDLKP NIG G VKL D GL+ +V+ ++ Y + G GS R+MAPE LPYN+K DVYSF ++LW++ A +KP+ GM + Y VV+G RPP++ +W +LV L+Q CW +RPS ++ E L + + GG
Sbjct: 366 AQLNNVEYLTDGGNNWIHTAVLNGRPVVVKTLKPECQDVAV--AINEIELELDIHSKL----DHANICSLVGAGT-----TSKGVRFIVLERLDGGTLTQMLGYDNRIRDRRRRFWRKKQFAFVEVMRFARCIADALNYCHSQAIPGNMCLHRDLKPDNIGFTLDGKVKLLDFGLARIVKNSDSDSNDVYHMSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERLDAMLSKEKGG 653
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC) HSP 1 Score: 184 bits (467), Expect = 3.970e-46 Identity = 101/302 (33.44%), Postives = 162/302 (53.64%), Query Frame = 2
Query: 197 ELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTP----FLLLEKLDGGTLENAF-------ERSPELWSDP----IGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFAAGSGGG 1057
L V+ GG I + V++G+ V+KT KP + A+ + +E+ I+ ++ DHPN+ + GAGF TP F++LE+LDGGT+ +R W+ + L + +LAE++ + HG A+P +VMHRDLKP NIG G ++LFD GL+ + + ++ Y + G GS R+MAPE PYN+K DVYSF ++LW++ A +KP+ GM + Y VV GG RP ++ +W LV L+++CW R + + + +++ + + GG
Sbjct: 446 SLRNVEYLTDGGNAWIHTAVFQGKSVVVKTIKPECQDVAL--AIKEIESELEIHSRL----DHPNICKLVGAGF---------TPRGIRFIVLERLDGGTMSQLLGYDNRIRDRRRRFWNKKKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVENASISNDVYNMSGETGSLRYMAPEVADCRPYNQKADVYSFGIILWELVAFKKPYDGMNREEFYSRVVHGGERPAINKKWPDDLVQLMKSCWDAESSQRINFVDIVDIIDSMLSGERSGG 732
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A7S3V705_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V705_9STRA) HSP 1 Score: 183 bits (465), Expect = 5.100e-46 Identity = 110/292 (37.67%), Postives = 159/292 (54.45%), Query Frame = 2
Query: 194 AELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLENAF-------ERSPELWSDP----IGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLS-VVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQI 1033
++L ++ GG I + V P V+K KP + A+N + E++I+R ++ H N+V FGAGF S + F+++E+LDGGTL +R W I L A ++AEA+ + H SAV G +V+HRDLKP NIGL G VK+ D GL+ VV S ++ +E+ G GS R+MAPE +G PYN KVD+YSF ++LW++ A +KPF GM Y VV GG RP + ++ L ++Q CW E RP+ Q+ E L +I
Sbjct: 395 SDLRNIEYLTDGGNNWIHTAVMNKTPIVIKQLKPEVQDVA--IAMNEIEGELAIHRLLN----HKNIVSLFGAGF-----TSNKSRFIVMERLDGGTLTQVLGYDTRIRDRRRRFWKKNKLSYIKVLDCAKQIAEAIDYCHRSAVEGSMVLHRDLKPDNIGLTLSGIVKIIDFGLARVVDNTSPNSNEVFEMSGETGSLRYMAPEVASGKPYNHKVDIYSFGMILWELVAYQKPFDGMNRDQFYERVVHGGFRPEITKKFPEDLADVIQRCWSTEAEKRPNFDQIIEELEEI 675
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.630e-45 Identity = 106/308 (34.42%), Postives = 157/308 (50.97%), Query Frame = 2
Query: 185 VSLAELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLT--EISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLENA-------------FERSPELWSDPIGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFAAGSGGGTP 1063
V +EL+ V+ +G C I + Y + V+K + DAV+ + E+ + ++ ++ N+VR GAG P FL++E+LDGGTL F+R + + L ++A+ + +LH A+PG +V+HRD+KP NIG G KL DLGL+ P S T+ + G GS R+MAPE PYNEKVDV+S+ +VLW++ LRKP+ GM Y VV+G +RPPL+ RW + LL ACW + RPS V L+++ + TP
Sbjct: 234 VQWSELSEVEFLVNGSRCTIYTATYNHQACVVKLLR--------KDAVDAAIVRRELELEMELLMRLNNENIVRLLGAGIE-------PERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPF--NYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEMLQEAADHHTP 524
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE) HSP 1 Score: 179 bits (453), Expect = 4.970e-45 Identity = 105/298 (35.23%), Postives = 153/298 (51.34%), Query Frame = 2
Query: 197 ELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLT-EISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTL-------------ENAFERSPELWSDPIGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFAAGS 1048
+LT V+ +G C I + Y P V+K + + D V L E+ + ++ HPN+VR GAG + P PFLL+E+LDGGTL F + + + L ++LAEA+ ++H A+PG +V+HRDLKP NIG QG++KL DLGL V + TY++ G GS R+MAPE G PYN DVY FA++LW++ + KPF M + VV+ G+RP + W V LLQ+ WH R S++++ LR + A +
Sbjct: 283 QLTTVEFMVNGSRCTIYTAFYGTTPVVVKVMR---KDVQDRDTVRQELELEMGLLMRLR----HPNIVRLLGAG-------TRPEPFLLIERLDGGTLAQRCGNAVKVRDRRRRFRHIRQFTYEEL--LRQGLQLAEALQYMHNEAMPGKLVVHRDLKPDNIGFDSQGNLKLIDLGLGRVVSKAADDKATYQMTGETGSLRYMAPEVALGKPYNGSADVYGFAMILWEMATMTKPFEMMGREQFLQQVVEKGVRPRVSENWPAPFVKLLQSGWHQDMHKRMSIVEITTTLRSLLEAAA 564
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Match: A0A4D9DAK6_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAK6_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.650e-44 Identity = 99/300 (33.00%), Postives = 152/300 (50.67%), Query Frame = 2
Query: 185 VSLAELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIDGNDAVNGLLTEISIYRQISQGGDHPNMVRAFGAGFHVQHGESMPTPFLLLEKLDGGTLE---------------NAFERSPELWSDPIGRLPVAIELAEAMVFLHGSAVPGGVVMHRDLKPSNIGLCGQGHVKLFDLGLSVVRPVSGAASTTYEVLGMAGSKRFMAPEACTGLPYNEKVDVYSFALVLWQICALRKPFAGMTAADHYRDVVQGGLRPPLDARWHPQLVHLLQACWHVHPEVRPSMLQVREMLRQIFA 1039
V +L V+ GG ++ + Y P ++K K + N+ L EI ++ Q +HPN+V+ +G+ P F+++E+L+GG+L N F R L A+++AEA+ ++H A+PG VMHRDLKP N+G G +K+ D GL+ P A + G GS R+MAPE YN+K D++S++ ++W++ L KPF G T D + +VV+GG RPPL+ RW + LLQACW + RP M +V E L+ + A
Sbjct: 189 VQWTDLHHVERLVDGGTSVVYTATYNRLPVIVKILK---EDCERNEL---RLREIRGEIELMQSLNHPNIVQYIASGWE-------PRTFVVMERLEGGSLNQRLGFAPTHSGVHRNNFFTRDVRKAFSYESLLKYALQMAEALKYMHDEALPGYAVMHRDLKPDNVGFKADGTLKILDFGLAKAIPKDETARQKVRMTGETGSIRYMAPEVALHKQYNQKADIFSWSFIVWEMATLTKPFEGYTKHDFFTNVVKGGERPPLNKRWPKEFAELLQACWDTNQNKRPEMAEVCEALKVLLA 475 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig149.104.1 >prot_P-littoralis_Contig149.104.1 ID=prot_P-littoralis_Contig149.104.1|Name=mRNA_P-littoralis_Contig149.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=304bp MAQAFRDGVSLAELTAVQPFASGGFCIICSCVYRGRPAVLKTTKPGSSSIback to top mRNA from alignment at P-littoralis_Contig149:354864..359819+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig149.104.1 ID=mRNA_P-littoralis_Contig149.104.1|Name=mRNA_P-littoralis_Contig149.104.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4956bp|location=Sequence derived from alignment at P-littoralis_Contig149:354864..359819+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig149:354864..359819+ >mRNA_P-littoralis_Contig149.104.1 ID=mRNA_P-littoralis_Contig149.104.1|Name=mRNA_P-littoralis_Contig149.104.1|organism=Pylaiella littoralis U1_48|type=CDS|length=912bp|location=Sequence derived from alignment at P-littoralis_Contig149:354864..359819+ (Pylaiella littoralis U1_48)back to top |