mRNA_P-littoralis_Contig149.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: D7FW99_ECTSI (PObg1, plastid Obg/CgtA-like GTPase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW99_ECTSI) HSP 1 Score: 895 bits (2313), Expect = 0.000e+0 Identity = 462/577 (80.07%), Postives = 498/577 (86.31%), Query Frame = 2
Query: 215 MPNTQMARRRAVPILAGCIAALRGCSCFVLMMPNRAARVPQQHYTSTPFLQERRA-----------------GMERGRGEELVMDVGKAEAA-EALVAEKKLEQEALKIRNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRDQDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFDGEAVKVLDSPAAEDTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYLQGLDNVAHW----DDDDDWTE 1879
M T +RR +P LA CI L+ +CF L++PN AAR + ST RA G RGRG +M G A AA EAL AE+K E+EAL+ RNDQEW FFDTARINVKAG GGNGCIATRREKGISMGGPNGGSGGRGGSI+LRCSEGLNTLAMVRHKVH+RATDGQNGQGKSRTGNSG DVYV+AP+GTVVRDQ+G LCGELT HD+ELL+ARGGRGGRGNEAFKT+RSKIPMFGEKGEPGGERWLS+ELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDE EAGM+KGLVLADIPGLLEGAH GVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLL+KQQVVVL KIDLPHVRS+Q+ELE +IKAELDHTRFMSISAV GENTQELMRRLRKLVN+LP VDDLFDGEAVK+LDSPAAEDTGF IETDP YPGQFRV GARI+QIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGA+ GDLIMIDEWDFD+KP+V+SVYL+GL+NV + D+D DW E
Sbjct: 1 MTRTHRSRRIRLPTLAACIVLLQRGNCF-LLIPNTAARSGSHRFRSTATATLHRAAAAPSPFSPARCRTSVVGGRRGRGGVQMMGGGNAAAAAEALEAEEKAEREALRARNDQEWQFFDTARINVKAGKGGNGCIATRREKGISMGGPNGGSGGRGGSIFLRCSEGLNTLAMVRHKVHYRATDGQNGQGKSRTGNSGADVYVSAPLGTVVRDQEGVLCGELTEHDQELLVARGGRGGRGNEAFKTSRSKIPMFGEKGEPGGERWLSMELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEAEAGMDKGLVLADIPGLLEGAHEGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLKKQQVVVLTKIDLPHVRSKQKELENLIKAELDHTRFMSISAVAGENTQELMRRLRKLVNSLPPVDDLFDGEAVKMLDSPAAEDTGFSIETDPSYPGQFRVHGARIVQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAQAGDLIMIDEWDFDYKPDVASVYLEGLENVGDFGDDGDEDGDWVE 576
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A835YRC8_9STRA (GTP1/OBG-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC8_9STRA) HSP 1 Score: 576 bits (1485), Expect = 1.950e-194 Identity = 292/445 (65.62%), Postives = 346/445 (77.75%), Query Frame = 2
Query: 497 QEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRDQDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFDGEAVKVLD-SPAAEDTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
QEW FFDTARINVK G GG+GC+A RREKGI+MGGP+GG+G RGGS+ LRC EGLNTLA VR+KVH++ DG NGQGK R + D++V P GTV+RDQDG LCGE+T H EEL++A+GGRGGRGN AFKT+R+ P F E GE G RWL+LELKLVADVG +GVPNAGKSTLLA SNAKPKIADYPFTTV PNLGV + + G KGLVLADIPGLLEGAH GVGLGLAFLRHVQRCRVLVH+V+GDS DP+GD+ AIQQELELF+ KL K QVVVLNK+DLPHV +Q E+E + A + H R M+ISA K +T ELM R+ KLV +LP ++LF+GE ++ L+ ED GF I +DP YPGQ+RV G RI + ARMT WDYYEA+ RFQR+M+AMGV+ L AGAK GDLIMIDE+DFDF ++ + L
Sbjct: 36 QEWKFFDTARINVKGGDGGDGCVAFRREKGIAMGGPSGGNGSRGGSVILRCDEGLNTLATVRNKVHYKGEDGSNGQGKCRHAAAPRDLFVRVPPGTVIRDQDGVLCGEVTDHGEELVVAKGGRGGRGNLAFKTDRNNAPKFMEVGEKGSMRWLTLELKLVADVGLIGVPNAGKSTLLAAVSNAKPKIADYPFTTVIPNLGVWEE--SAEVGGSPKGLVLADIPGLLEGAHMGVGLGLAFLRHVQRCRVLVHVVNGDSPDPLGDFEAIQQELELFNIKLAGKPQVVVLNKVDLPHVAEKQAEIEAGLLAMMPHKRLMTISAAKRLHTSELMYRVLKLVQSLPEEEELFNGEDIRTLEPDDDDEDRGFQILSDPAYPGQWRVAGTRIERTARMTNWDYYEAIVRFQRIMDAMGVNQELLSAGAKKGDLIMIDEYDFDFSGDLKASSL 478
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A7S2RXC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXC1_9STRA) HSP 1 Score: 538 bits (1385), Expect = 1.320e-177 Identity = 276/461 (59.87%), Postives = 334/461 (72.45%), Query Frame = 2
Query: 488 RNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRDQDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFDGEA----VKVLDSPAAEDTG----------FDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
++D EW FFDTARINV G GGNGC+A RREKGI GGP+G +GGRGGS+YL C LNTL M+R VHHR DG+ GQGKSRTG SG+D + P GTVV+D +G GEL E L +A GGRGGRGN+AFKT ++ P E+GEPG E WL++EL+LVADVGFVGVPNAGKSTLLA +NAKPKIA+YPFTTV PNLGVCD+L D + G GLVLADIPGLLEGAH+GVG+GLAFLRHV RCRVL+H+VSGDS DPVGD++AI +EL LF+P L EKQQVVVLNK+D+P V + E+ I E H+R M++SA GEN +ELM+R KLV P + E VK+ +S A D FDIE DP +PGQFRV AR+ ++ RMT WDYYEA+ RFQRV+EA GV AL++ GA+ GDL+MID+ DFDF P S+ ++
Sbjct: 85 KDDPEWAFFDTARINVCGGDGGNGCVAFRREKGIPYGGPSGANGGRGGSVYLVCDPSLNTLGMLRRNVHHRGGDGETGQGKSRTGRSGSDTVIPVPAGTVVKDFEGRFAGELVSKGERLCVAPGGRGGRGNQAFKTPKNNAPRLAERGEPGVEHWLNVELRLVADVGFVGVPNAGKSTLLAAVTNAKPKIANYPFTTVVPNLGVCDLL-DVSQPG--SGLVLADIPGLLEGAHSGVGMGLAFLRHVARCRVLLHVVSGDSEDPVGDFKAINEELRLFNPVLAEKQQVVVLNKMDIPEVGTTAAEIMEEIAKEAGHSRIMNVSAATGENVRELMQRTAKLVARQPPAPSFAEAEPNLKRVKLDESDAEADMKLSLVGNRGFRFDIEADPHFPGQFRVKSARLEKMVRMTNWDYYEALARFQRVLEATGVAKALEERGAQEGDLVMIDDLDFDFSPLGSNSFI 542
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A0G4ENM0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ENM0_VITBC) HSP 1 Score: 501 bits (1291), Expect = 2.540e-162 Identity = 257/457 (56.24%), Postives = 325/457 (71.12%), Query Frame = 2
Query: 485 IRNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRDQDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFD----------GEAVKV----LDSPAAEDTGFDIETDP-KYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPE 1810
++ND EW FFDTA+INVKAG GGNGC + RREK + +GGP+GG+GGRGGS+ L +NTL R +VH +A G +G K++ G SG+D+ V P GTVVRD++G L GEL R + L +ARGGRGGRGN +FKT + P EKGE G RW++LELK+VADVG VG PNAGKSTLL+V SNAKPKIADYPFTTV PNLGVCD + + AG +G+VLADIPGLLEGAH GVGLG+AFLRHV+RC++++H+++GDS DPVGD+ AI QEL F+P+L +K QVVVLNKIDLPHVR R L+ I+A L+HTRF++ISA+ E ELM RLRKL N + + D G +V LD + D F IE DP +PGQ+RV G I ++ MT WDYYE+ RF+R+++A G+ AL AGA+ GDL+MI + DF+F PE
Sbjct: 208 LKNDPEWQFFDTAKINVKAGDGGNGCCSFRREKYVPLGGPDGGTGGRGGSVVLEADPNINTLYRFRRQVHWKAQSGGHGGSKNKMGESGSDLVVIVPPGTVVRDEEGRLAGELRRQGDRLTVARGGRGGRGNASFKTQANNAPKLAEKGERGTCRWINLELKIVADVGLVGCPNAGKSTLLSVVSNAKPKIADYPFTTVVPNLGVCD-MPEVLSAGDGRGMVLADIPGLLEGAHRGVGLGMAFLRHVERCKIILHIINGDSPDPVGDFHAINQELLFFNPQLAKKPQVVVLNKIDLPHVRERLPALQEEIQATLNHTRFLAISALTRERVPELMMRLRKLANHIAETEKDVDFGWVADGGGAGGEDRVDFERLDQGSVLDGEFVIEADPVNFPGQYRVVGRTIERVVDMTNWDYYESTLRFKRILDATGITKALHAAGAEAGDLVMIGDLDFEFAPE 663
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: B7S426_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S426_PHATC) HSP 1 Score: 488 bits (1257), Expect = 2.110e-159 Identity = 251/453 (55.41%), Postives = 322/453 (71.08%), Query Frame = 2
Query: 488 RNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRD-QDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNA-----LPAVDDLFDGEAVKVLDSPAAEDTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
++D EW FFDTARI+V+AG GG GC+A RREKG + GGPNGG GGRGGS+YL GLNTL +R KVH +A G+NGQGK+R G S ++Y+ P GTVVRD + + GEL ++LL+A+GGRGGRGN AF T R P E+GEPG RWLS+EL+L+ADVGF+G+PNAGKSTLLA +S A+PKIA+YPFTT+ PNLGVCD+ G GLVL DIPGL+EGA G G+G AFLRHVQRCRVL+H+V G S DP+ D+ I +EL+ + L +K QVVVLNKID+P V+ RQEEL ++ H+R ++ISA E QELM RLRK VN LP + ++ +A DS F+I++DP YPGQ+RV G I Q+A+MT W+Y EAV+RF R +EA+G+ A L + GA+ GDLIMID++DFDF P +++VY+
Sbjct: 30 KDDPEWKFFDTARIHVQAGDGGTGCVAFRREKGEARGGPNGGRGGRGGSLYLIADPGLNTLMPLRQKVHVKARQGRNGQGKNRDGTSADNIYIRVPPGTVVRDLKTQKVAGELREAGQKLLVAKGGRGGRGNAAFMTARRTAPKLAERGEPGSARWLSVELRLLADVGFLGMPNAGKSTLLAAASAARPKIANYPFTTIVPNLGVCDL-------GQGAGLVLCDIPGLIEGASEGAGMGGAFLRHVQRCRVLLHVVDGTSEDPIRDFNIINKELQQYDEFLAQKPQVVVLNKIDVPEVQERQEELMEALRTATGHSRVLAISAATTERVQELMGRLRKFVNVQPVPDLPVLPEIDLSKAGLDYDS-----DDFEIQSDPSYPGQWRVLGEYIEQMAKMTHWEYPEAVERFGRQLEALGISAELARRGAQDGDLIMIDQYDFDFSPGMTNVYI 470
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A7S1VVD0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVD0_9STRA) HSP 1 Score: 487 bits (1253), Expect = 8.070e-159 Identity = 246/451 (54.55%), Postives = 324/451 (71.84%), Query Frame = 2
Query: 482 KIRNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRD-QDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFDGEAVKV-LDSPAAEDTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
++ + +EW FFDTARINV G GGNGC+A RREK + GGPNGG GG++ LRC+ GLNTLA +R KVH RA G+NG G + G G D+Y+ P GT+VRD + L GEL H +ELL+ARGGRGGRGN+AF T+R+ P E+GEPG +RWL++EL+L+ADVGF+GVPNAGKSTLLA +S A+PKIA+YPFTT+ PNLGVCD LGDE GLV+ DIPGL+EGA +G GLG AFLRHVQRC+VL+H+V G S DP+GD+ AI +EL + L K QVVVLNKID+ V+ +Q+EL +K H+R ++ISA E +ELM RL+K V+A P DL + + L + + F+I TDP YPGQFR+ GA I Q+A MT W+Y EAV RF R+++A+G+ A+++ GA+ GDL+M+ E+DF+F P +++VY+
Sbjct: 8 RVTDHEEWKFFDTARINVSGGDGGNGCVAFRREKCEARGGPNGGRXXXGGNVVLRCNSGLNTLAPLRQKVHIRAIKGRNGIGHGKDGAHGKDMYIDVPPGTLVRDLKTQKLAGELREHGQELLVARGGRGGRGNKAFMTDRNTAPKLAERGEPGAQRWLNVELRLLADVGFLGVPNAGKSTLLAAASAARPKIANYPFTTIVPNLGVCD-LGDEG-----AGLVMCDIPGLIEGASSGAGLGPAFLRHVQRCKVLLHVVDGTSEDPIGDFEAINKELAQYDELLSSKPQVVVLNKIDVSEVQEKQDELMAKLKEAAGHSRVLAISAATTERVKELMGRLKKFVDAQPKELDLPPATEIDLSLHALDNDSDDFEIVTDPAYPGQFRIKGAYIEQVAIMTHWEYPEAVDRFGRILDAIGISDAMQQVGAQDGDLVMVGEYDFEFAPGMTNVYI 452
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A7S3V763_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V763_9STRA) HSP 1 Score: 482 bits (1241), Expect = 1.620e-156 Identity = 253/461 (54.88%), Postives = 324/461 (70.28%), Query Frame = 2
Query: 452 AEKKLEQEALKIRNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRDQ-DGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFDGEAVKVLDSPAAEDTG-FDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
AEK L+ + R+D EW FFDTARINV G GGNGC+A RREKG +M GP+GG GG GGSI L C EGLNTLA R++VH RA G+NG GK + G+ +D + P GTVVR+ + GEL EELL+ARGGRGGRGNEAFKT R P E+GEPG RWL LELKLVADVGF+G PNAGKSTLLA +S A+PKIA+YPFTT+ PNLGVCD+ GDE G+VL DIPGL+EGA +GVGLG+ FLRH+QRC+V++H+V G S DP+GD+ I EL+ + L EK QVVVLNKID+ V+ RQEEL +K H+R ++ISA + +ELM RL+K +A P VD L + V + D+ F+I +DP YPGQ+RV G I Q+A+MT W+Y EA++RF R +EA+G+ L++ GA GDL+M+D++DF+F P +++ Y+
Sbjct: 58 AEKALQNQ----RDDPEWKFFDTARINVTGGDGGNGCVAFRREKGEAMKGPSGGRGGNGGSIILVCDEGLNTLAPSRNRVHVRARSGKNGIGKGKIGSKASDERIPVPPGTVVRELLTQKVAGELKIDGEELLVARGGRGGRGNEAFKTARYTAPKLAERGEPGASRWLGLELKLVADVGFLGKPNAGKSTLLAAASAARPKIANYPFTTIVPNLGVCDI-GDEG-----AGIVLCDIPGLIEGASSGVGLGITFLRHIQRCKVILHVVDGTSEDPIGDFTTINGELKKYDTFLAEKPQVVVLNKIDVTEVKERQEELLAQLKEAAGHSRVLAISAATKDRVKELMGRLKKFGDAQPVVD-LPEPPQVDFTQAELESDSDDFEIMSDPAYPGQWRVNGDYIEQVAKMTHWEYPEAIERFGRQLEALGIAGELQRRGATDGDLVMVDKFDFEFNPGMTNPYI 507
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A6U3PW53_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PW53_9STRA) HSP 1 Score: 480 bits (1235), Expect = 2.410e-155 Identity = 264/516 (51.16%), Postives = 339/516 (65.70%), Query Frame = 2
Query: 302 LMMPNRAARVPQQHYTSTPFLQERRAGMERGRGEELVMDVGKAEAAEALVAEKKLEQEALKIRNDQ-EWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRD-QDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVD-----DLFDGEAVKVLDSPAAEDTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
LM A + QH+ + +Q R A ME + D+ E++ + + I +D EW FFDTAR++V G GGNGC+A RREKG MGGP+GG GG GGSI ++ LNTLA +R++VH RA G NG GK++ G DV V P GT+VR+ G L GEL +ELL+ARGGRGGRGN AF T + P E+GEPG RWLS+EL+LVADVGF+G PNAGKSTLLA +S AKPKIA+YPFTT+ PNLGVCD+ D+ E GLVL D+PGL+EGA +G GLGL+FLRHVQRCRVL+HLV G S DP+GD+R I +ELEL+ L K QVVVLNK+D+ VR L +K E HTR ++ISAV EN +ELM RL+K V P D ++ +A DS F+I +DP YPGQ+R+ G I Q+A+MT W+Y EA++RF R +EA+G+ A L++ GA GDLIMIDE+DFDF P ++++Y+
Sbjct: 16 LMTNPCTAFLTPQHHNNRNTIQRRMATMEPYNAD---ADMSYKRRQTLRDKEQRAQNQNSNINSDDPEWKFFDTARVHVSGGPGGNGCVAFRREKGEPMGGPSGGRGGSGGSIIMKVDTRLNTLAPLRNRVHVRAGKGNNGIGKNKDGKCAEDVIVLVPPGTLVRELHTGKLAGELREEGDELLVARGGRGGRGNAAFMTAKRTAPRLAERGEPGAARWLSVELRLVADVGFLGKPNAGKSTLLACASAAKPKIANYPFTTIVPNLGVCDL--DDGE-----GLVLCDVPGLIEGAASGTGLGLSFLRHVQRCRVLLHLVDGTSEDPIGDFRTINKELELYDEYLASKPQVVVLNKMDVSEVRENSTSLIEELKKEAGHTRVLAISAVTTENVKELMSRLKKFVKVQPEADLPPLPEIDFSKAGLEYDSDE-----FEIISDPAYPGQWRIKGEYIEQVAKMTHWEYPEAIERFGRQLEALGIAAELERRGAIDGDLIMIDEYDFDFAPGMTNMYI 516
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A7S2CMR3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMR3_9STRA) HSP 1 Score: 466 bits (1198), Expect = 8.470e-152 Identity = 238/438 (54.34%), Postives = 306/438 (69.86%), Query Frame = 2
Query: 581 KGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRDQDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVDDLFDGEA----VKVLDSPAAE-----DTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYLQGLDNVAHWDDDD 1867
KGI GGP+GG+GG GGS++ C LNTL ++R VH+RA DG NGQGKS+ G G V V P GTV+RD +G L GEL + + + + RGG GGRGN +FKT RS P E G+PG E WLS+EL+LVADVG VGVPNAGKSTLL+ +SNA+PKIADYPFTTV PNLGVCD+L + E KGLVLADIPGLLEGAH GVG+GLAFLRHV RC+VL+H+V+G + DP+GD+ AI EL LF+P+L K QVVVLNKID+P V + +E LE +KA H+R M+ISA G N +ELMRR KLV A P +++ E V + + P ++ + FDI TDP +PGQFRV+ R+ ++ RMT+WDY EA RF+R++ A GV+ AL + GA GD IMI + DF+F P ++ +G++ + + DD
Sbjct: 1 KGIPYGGPSGGNGGSGGSVFFHCDGSLNTLGVLRRSVHYRAKDGTNGQGKSKHGCKGEHVVVPVPPGTVIRDIEGRLAGELVKDGDRICVGRGGIGGRGNLSFKTPRSNAPRLAEAGDPGAEHWLSIELRLVADVGLVGVPNAGKSTLLSAASNARPKIADYPFTTVVPNLGVCDILPQDSEES-HKGLVLADIPGLLEGAHDGVGMGLAFLRHVSRCKVLIHVVNGAAEDPIGDFEAINTELRLFNPQLALKPQVVVLNKIDIPEVEAARESLEKELKAAAGHSRVMTISAAAGSNVKELMRRTAKLVMAQPDAPTIYESEPGTERVTLDEGPESQLEHGRNMAFDIHTDPVFPGQFRVSSKRLERLVRMTKWDYSEAALRFERILVATGVNEALSEKGAAKGDTIMIGDMDFEFSPNQAA--YEGMEFLETFSMDD 435
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Match: A0A7S4ARA8_9STRA (Hypothetical protein n=3 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARA8_9STRA) HSP 1 Score: 469 bits (1206), Expect = 1.370e-150 Identity = 245/471 (52.02%), Postives = 326/471 (69.21%), Query Frame = 2
Query: 425 KAEAAEALVAEKKLEQEALKIRNDQEWHFFDTARINVKAGTGGNGCIATRREKGISMGGPNGGSGGRGGSIYLRCSEGLNTLAMVRHKVHHRATDGQNGQGKSRTGNSGTDVYVTAPIGTVVRD-QDGSLCGELTRHDEELLIARGGRGGRGNEAFKTNRSKIPMFGEKGEPGGERWLSLELKLVADVGFVGVPNAGKSTLLAVSSNAKPKIADYPFTTVTPNLGVCDVLGDEDEAGMEKGLVLADIPGLLEGAHTGVGLGLAFLRHVQRCRVLVHLVSGDSVDPVGDYRAIQQELELFSPKLLEKQQVVVLNKIDLPHVRSRQEELETMIKAELDHTRFMSISAVKGENTQELMRRLRKLVNALPAVD--DLFDGEAVKVLDSPAAEDTGFDIETDPKYPGQFRVTGARIIQIARMTEWDYYEAVQRFQRVMEAMGVDAALKKAGAKVGDLIMIDEWDFDFKPEVSSVYL 1828
K + AE A K E ++NDQEW FFDTARI+V G GG GC++ RREKG MGGPNGGSGGRGGS++L C + +NTLA +R++VH RA +NG GK + G G DV + P GTV+R+ + GEL E++L+ARGGRGGRGN AFKT+R+ P E+ EPG +RWLS+EL+LVADVGF+G PNAGKSTLLA SS A+PKIA+YPFTT+ PNLGVCD+ DE GLVL DIPGL+EGA G GLG AFLRHVQRC+VL+H+V G + DP+GD+ I +EL P L EK QVVV+NK+D+ V+ +++L + +K + H+R + ISA EN +ELM RL+K V+A P + + + + K ++D ++I +DP YPGQ+RV G I QIARMT W+Y EAV RF R +EA+G+ + L+ GA+ DL+M+D++DF+F ++ Y+
Sbjct: 92 KNQLAERRGASGKTGPEQNAVKNDQEWKFFDTARIHVTGGDGGTGCVSFRREKGEPMGGPNGGSGGRGGSVWLICDKSVNTLAPLRNRVHIRAGKARNGLGKGKHGQKGRDVIMAVPPGTVIRELHTQRMAGELKVDGEKMLVARGGRGGRGNAAFKTDRNTAPKLAERAEPGAQRWLSVELRLVADVGFLGKPNAGKSTLLAASSAARPKIANYPFTTIVPNLGVCDI---SDEG---AGLVLCDIPGLIEGAAGGAGLGPAFLRHVQRCKVLLHVVDGSADDPIGDFITINEELRKHDPFLAEKPQVVVVNKVDISEVKELEDDLISELKRKAGHSRVLPISAATTENVKELMGRLKKFVSAQPESELPPILEVDLAKASLDHDSDD--YEIISDPAYPGQWRVKGEYIEQIARMTHWEYPEAVARFGRQLEAIGISSDLQMRGAQDDDLVMVDKYDFEFNSYYNNQYI 554 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig149.78.1 >prot_P-littoralis_Contig149.78.1 ID=prot_P-littoralis_Contig149.78.1|Name=mRNA_P-littoralis_Contig149.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=560bp MPNTQMARRRAVPILAGCIAALRGCSCFVLMMPNRAARVPQQHYTSTPFLback to top mRNA from alignment at P-littoralis_Contig149:288163..293867- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig149.78.1 ID=mRNA_P-littoralis_Contig149.78.1|Name=mRNA_P-littoralis_Contig149.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5705bp|location=Sequence derived from alignment at P-littoralis_Contig149:288163..293867- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig149:288163..293867- >mRNA_P-littoralis_Contig149.78.1 ID=mRNA_P-littoralis_Contig149.78.1|Name=mRNA_P-littoralis_Contig149.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1680bp|location=Sequence derived from alignment at P-littoralis_Contig149:288163..293867- (Pylaiella littoralis U1_48)back to top |