mRNA_P-littoralis_Contig149.77.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: D7FW98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW98_ECTSI) HSP 1 Score: 231 bits (590), Expect = 4.620e-70 Identity = 158/204 (77.45%), Postives = 168/204 (82.35%), Query Frame = 2
Query: 260 MVWNRRKQQWMKVEDTAETPGKAGG-SPTSNL-LSSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGDQHTAPAVAAK---PQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPA----VSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 844
MVWNRRKQQW++V+ T E+P KA SPTS+ LSSNAYASGVNQNAGNFLT+KPIT+IHAPPGG SSISFGDQHT P AA + Q QQGLVLGTPTQP TPESA+S E+G APIPMMELPPAP XXXXXXXXXXXXXXXXXXXXXXX VSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG
Sbjct: 1 MVWNRRKQQWIEVDVTEESPSKAAAASPTSSTALSSNAYASGVNQNAGNFLTDKPITRIHAPPGGASSISFGDQHTGPTAAAAGVTTKTQDQQGLVLGTPTQPTTPESAESTEEGPAPIPMMELPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 204
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A7S2RVM1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RVM1_9STRA) HSP 1 Score: 104 bits (260), Expect = 6.130e-22 Identity = 78/187 (41.71%), Postives = 94/187 (50.27%), Query Frame = 2
Query: 299 EDTAETPGKAGGSPTSNLLSSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGD---QHTAPAVAAKPQQQQQQGLVLGTPTQPATP--ESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 844
+ A+ +A + +SSNAYASG NQNAGN LT++P T++HAPPGG SS FG Q + A PQQQ P +P TP + + V AP PP S VSSNAYA+GSNQN GNF+T RPTTRV APPGG S+ITFG
Sbjct: 90 DQAAKATSRASAAAPERKVSSNAYASGSNQNAGNVLTDRPTTRVHAPPGGSSSNIFGTDPVQEPKASWVAPPQQQ---------PVEP-TPIVDKTNVVHTAPAPGTKKVEPPVDSR-------------------------------VSSNAYATGSNQNCGNFITERPTTRVHAPPGGVSNITFG 235
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A7R9TMZ4_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TMZ4_9VIRI) HSP 1 Score: 83.2 bits (204), Expect = 7.960e-15 Identity = 64/163 (39.26%), Postives = 82/163 (50.31%), Query Frame = 2
Query: 356 SSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGDQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 844
SSNAYA+G +QN GNF+T++ +++ PGG SSISFGD+ A A + QQQ PT+ P S S AP P P + A A SSNAYA+G++QN GNF+T R T+RV PGG SSI+FG
Sbjct: 11 SSNAYANGADQNCGNFITDRTTSRVLKAPGGGSSISFGDE----APAGQLQQQ--------APTRRGPPASQISFGYDEAPAPARAAQPEQATYGMRSD----------------------ARANSSNAYANGADQNCGNFITDRTTSRVLKAPGGGSSISFG 139
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A7S0NNN3_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NNN3_MICPS) HSP 1 Score: 84.3 bits (207), Expect = 2.380e-14 Identity = 59/163 (36.20%), Postives = 81/163 (49.69%), Query Frame = 2
Query: 356 SSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGDQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 844
SSNA+A+G +QN GN +T++P T++HAPPGG SSI FG A P+ + + + +P + S G APS A + SSNA+A+G++QN GNF+T RPTTR+ APPGG S I+FG
Sbjct: 13 SSNAFANGSDQNCGNVITDRPTTRLHAPPGGHSSICFG---------AAPEDRVRSTVATAQDKATNSPSAVQSQVFG-----------APST----------------------------ARSNSSNAFANGADQNCGNFITDRPTTRLHAPPGGQSQISFG 127
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: C1FHE0_MICCC (SAP domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FHE0_MICCC) HSP 1 Score: 81.6 bits (200), Expect = 6.540e-13 Identity = 70/163 (42.94%), Postives = 89/163 (54.60%), Query Frame = 2
Query: 356 SSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGDQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 844
SSNA+A+G +QN GN +T++P T++HAPPGG SSI FG A PE D V +A + +PSAV XXXXXXXXX A + SSNA+A+G++QN GNF+T RPTTR+ APPGG S I+FG
Sbjct: 13 SSNAFANGSDQNCGNVITDRPTTRLHAPPGGHSSICFG----------------------------AAPE--DRVRSTVATA-QDKATNSPSAVXXXXXXXXXX-----------------ARSNSSNAFANGADQNCGNFITDRPTTRLHAPPGGQSQISFG 127
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A812JVB4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JVB4_9DINO) HSP 1 Score: 78.2 bits (191), Expect = 8.660e-13 Identity = 59/162 (36.42%), Postives = 77/162 (47.53%), Query Frame = 2
Query: 353 LSSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGDQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSIT 838
++SN+YA+G NQN GN +++ P T++ APPGG SSI G A AA G P + A+ A PPA AV G P SSN+YASG++QN+GN +TG PTTRV PPGGAS ++
Sbjct: 17 VTSNSYANGSNQNCGNVISDIPSTRVAAPPGGKSSICLGWDDRPVARAA------------GRPVEEASRAQAHR-------------PPAGEAVRRDRRSVPEDQAQAY----------GTRPRESSNSYASGNSQNTGNVLTGVPTTRVSRPPGGASEMS 143
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A7S2F4N6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F4N6_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 3.450e-12 Identity = 60/174 (34.48%), Postives = 81/174 (46.55%), Query Frame = 2
Query: 356 SSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFGDQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG*SVIFVQISKA 877
S+N +ASG NQNAGN LTE+ T++H PGG SS+ G PA A +Q + L T PA + D+++ PP+ A G A S+N +ASG+NQN+GN +T R TTR+ PGG SS+ G V +KA
Sbjct: 26 SANRFASGANQNAGNVLTERSTTRLHQAPGGNSSLCLGGDVEKPAPAKAAARQSDENLDASN-TAPAQ-QGNDTIK-----------PPSSGAAAGV-----------------------GVAAPSANRFASGANQNAGNVLTERSTTRLHQAPGGNSSLCLGGDVEKPAPAKA 163
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A1Q9D1R6_SYMMI (Uncharacterized protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D1R6_SYMMI) HSP 1 Score: 79.0 bits (193), Expect = 5.550e-12 Identity = 58/163 (35.58%), Postives = 76/163 (46.63%), Query Frame = 2
Query: 353 LSSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFG-DQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSIT 838
++SN+YA+G NQN GN +++ P T++ APPGG SSI G D A +P E A V+ PPA AV G P SSN+YASG++QN+GN +TG PTTRV PPGGAS ++
Sbjct: 276 VTSNSYANGANQNCGNVISDIPSTRVAAPPGGKSSICLGWDDRPVARAAGRPM------------------EEASRVQ--------AHRPPAGEAVRRDHRSVPEDQAY------------GTRPRESSNSYASGNSQNTGNVLTGVPTTRVMRPPGGASEMS 400
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: G4YIZ7_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YIZ7_PHYSP) HSP 1 Score: 72.4 bits (176), Expect = 1.440e-11 Identity = 57/158 (36.08%), Postives = 72/158 (45.57%), Query Frame = 2
Query: 380 VNQNAGNFLTEKPITKIHAPPGGVSSIS---FGDQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 844
V QN NFL +KP T++HAPPGG SS+ FG + A +Q ++ + + A P + D+ G P PAP G SSN+YASGSNQN GN +T R TR+ APPGG SSI FG
Sbjct: 8 VTQNVDNFLRDKPSTRLHAPPGGGSSVGSLIFGGGDGSSQFAGHERQSMRRKVES---PELANPYAKDNRRGGYNDAPNHFNQPAPHQQAQPA----------------------GRGGASSNSYASGSNQNCGNVLTDRRITRIHAPPGGVSSIHFG 140
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Match: A0A812UW40_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UW40_9DINO) HSP 1 Score: 73.9 bits (180), Expect = 2.210e-11 Identity = 60/171 (35.09%), Postives = 80/171 (46.78%), Query Frame = 2
Query: 329 GGSPTSNLLSSNAYASGVNQNAGNFLTEKPITKIHAPPGGVSSISFG-DQHTAPAVAAKPQQQQQQGLVLGTPTQPATPESADSVEDGLAPIPMMELPPAPSAVEXXXXXXXXXXXXXXXXXXXXXXXNGGAPAVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSIT 838
GG P ++SN+YA+G NQN GN +++ P T++ APPGG SSI G D A A +P P + A+ A PA A+ G P SSN+YASG++QN+GN +TG PTTRV PPGGAS ++
Sbjct: 11 GGRPA--RVTSNSYANGSNQNCGNVISDIPSTRVAAPPGGKSSICLGWDDRPAARPAGRP------------PAEDASRAQAR---------------PAGEALRRDHRSPEDLAY-------------GTRPRESSNSYASGNSQNTGNVLTGVPTTRVLRPPGGASEMS 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig149.77.1 >prot_P-littoralis_Contig149.77.1 ID=prot_P-littoralis_Contig149.77.1|Name=mRNA_P-littoralis_Contig149.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=265bp MVLVLSVGLSVVCGPVTQPSTHTAHSLIREETSPLQPACVFVTMSRSHVSback to top mRNA from alignment at P-littoralis_Contig149:283028..287363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig149.77.1 ID=mRNA_P-littoralis_Contig149.77.1|Name=mRNA_P-littoralis_Contig149.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4336bp|location=Sequence derived from alignment at P-littoralis_Contig149:283028..287363+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig149:283028..287363+ >mRNA_P-littoralis_Contig149.77.1 ID=mRNA_P-littoralis_Contig149.77.1|Name=mRNA_P-littoralis_Contig149.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=795bp|location=Sequence derived from alignment at P-littoralis_Contig149:283028..287363+ (Pylaiella littoralis U1_48)back to top |