prot_P-littoralis_Contig149.54.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig149.54.4
Unique Nameprot_P-littoralis_Contig149.54.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1080
Homology
BLAST of mRNA_P-littoralis_Contig149.54.4 vs. uniprot
Match: D7FW92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW92_ECTSI)

HSP 1 Score: 516 bits (1328), Expect = 1.500e-165
Identity = 413/1007 (41.01%), Postives = 484/1007 (48.06%), Query Frame = 0
Query:    2 TMIVSVCYDDGPA---EKL-MIASSSSSSELTNVLCALFKIPSHERVVGLATLTGDNGVVIPLSAACRYPNLIFQEDKRLGNVFRLVTKDAGREDEILFPISALTPSPPPGRSHLSPTWASSLPELRVSTTEAVVVPELVRDGCLTPGQGAAVVAMIRAEDPVVFTACRVAGAAXXXXXXXXXXXXXXXXXXXNLASVAASSGARGAGNGAESRREWSGEATRSFASMLKIVLRDRERRRVRRAVGLGDGGVYHQGGELEAGEGAGGRDGNGGMWRREGRPFGADDFCGRREG---ERGEETTCNDSPEVPETFQSDVIALADAALVIGKITKKTYVRALYKAVTLDRRLVLAYHADLEQQQQQGRQDGGD-VPQATLRAFTTGERSQAANGTDAAATARSQSSSAILGVGGMEAA--ATGGGNVGQGGSVTSSGANNIHEDLLAREAELRDDFLRKALSLIEEGSDGFTARHRAVAQRAISVGHPWVCAIYDECKETGDVRGLMQNLQCLPALLERDQAAAFATNISQPPPPGEADSPSWPRHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQRSGSRNPPSLSAGVAAKKPDAAALSSVAIEALASGDYAETEVGVGKAAGSADAADSRLGSSGRSADGQTGTPAFDMVVAQLRRVIAGCSQLLVLRGVIGEREERALSVMSSRGSPVLLAAVEAYGTNQDLEDLLHTLQTAAEVELSLTAAIAATXXXXXTDHKIAASP-------QRRSMPHQQRPQQQEVHQPSLIATATSAGTASGSIDVSRSVRVHHALNVEGLKEGSTGDGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTAAVXXXAQELAAARFAGMRSAAEATSAAVGTPSEREPESSVSPSLGKGSEDEETSGDRRLRQDVSQLVAVMVKQGMLTDRQRLFLLAQVGRRVTKVARERHALYVETGNWKELYTVLMALSTPAQNMAKK 991
            T++VS+C+ DG +   EKL ++A  + + E+  +L ALF+IPSHERVVGLA++TG  GV IPLSA+CRYPNLIF+E++RLG VFR+VTKDA  EDE+LFPISALTP P PG S L PTWASS PELRV+T E V +PELV  G LT  QG  VV  +RAEDPVVF ACRVAGAA                      S+ +S+ A       E RREWSGEA RSFASM+K+VL  +        VG GDGG          GE  GG    GG  R            GRR     E  E+  C  S EVPE+FQ D +ALAD ALV GKI+K+ YVRAL+K VTLD  LV AY  +    ++QGRQ+ G+ + +A +RAF   ++ + A+  D       Q   A   VGG++AA  AT  G++GQG            EDL+AREAELRDDFLR+ALSLIEEG  G +A+HRAV ++AISVGHPWV AIYDECKETGDVRGLM                                                                                                                                            G+ G PAF MVV QL RV+AGCSQLL LRGVIGEREER L  MS+RGSPVLLAAVEAYG NQDLEDLL TLQTAAE+ELSLTAA    XXXXX                QRR++PHQ                                               S   G R+                                                                                      A+VG  S+               E +E SGDRRLRQDVSQLVAVM KQGMLTDRQRLFLLAQVGRR+T+  RE+HA Y+ TGN KELYTVLMALS P     KK
Sbjct:    3 TLVVSICHHDGRSTRTEKLRLLAERNDAQEMALLLGALFEIPSHERVVGLASVTGSCGV-IPLSASCRYPNLIFREEERLGRVFRIVTKDAASEDEVLFPISALTPPPSPGLSRLPPTWASSPPELRVNTAETVAIPELVSTGALTRQQGVLVVERLRAEDPVVFAACRVAGAAG--------------------VSLGSSTPA------GERRREWSGEAKRSFASMVKVVLGGK--------VGRGDGGS-------SVGEADGGMPRRGGKGR------------GRRRAWAEEXXEQQLCRRSQEVPESFQVDALALADVALVTGKISKQAYVRALHKVVTLDSSLVSAYLGE----RKQGRQEDGEGMLEAVVRAFGPEQQGRTADNDDPR-----QQPRAAAAVGGVKAAGAATTDGSLGQGRMAA--------EDLVAREAELRDDFLRQALSLIEEGGAGLSAQHRAVVEKAISVGHPWVSAIYDECKETGDVRGLM--------------------------------------------------------------------------------------------------------------------------------------------GEAGNPAFHMVVGQLCRVVAGCSQLLRLRGVIGEREERTLKTMSNRGSPVLLAAVEAYGANQDLEDLLDTLQTAAEIELSLTAAXXXXXXXXXXXXXXXXXXXXXDPXQQRRALPHQ-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRDGGGRAQ-------------------------------------------------------------------------------------ASVGVSSD---------------EGKEPSGDRRLRQDVSQLVAVMAKQGMLTDRQRLFLLAQVGRRITRTTREKHAQYLATGNSKELYTVLMALSMPPPRNKKK 685          
BLAST of mRNA_P-littoralis_Contig149.54.4 vs. uniprot
Match: A0A6H5L1T6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T6_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 9.200e-55
Identity = 133/262 (50.76%), Postives = 154/262 (58.78%), Query Frame = 0
Query:   65 RYPNLIFQEDKRLGNVFRLVTKDAGREDEILFPISALTPSPPPGRSHLSPTWASSLPELRVSTTEAVVVPELVRDGCLTPGQGAAVVAMIRAEDPVVFTACRVAGAAXXXXXXXXXXXXXXXXXXXNLASVAASSGARGAGNGAESRREWSGEATRSFASMLKIVLRDRERRRVRRAVGLGDGGVYHQGGELEAGEGAGGRDGNGGMWRREGRPFGADDFCGRREGERGEETTCNDSPEVPETFQSDVIALADAALVIGKIT 326
            RYPNLIF+E++RLG +FR+VTKDA  EDE+LFPISALT  P PG S L PTWASS PELRVST E V VPELV  G LT  QG  VV M+RAEDPVVF ACRVAGAA                      ++ +S+ A       E RREWSGEA R+FASM+K+VL  +        VG GD G          GE  GG    GG  R  GR +      G +E +R     C  S EVPE+FQ D IALAD ALV GK++
Sbjct:   13 RYPNLIFREEERLGRIFRIVTKDAASEDEVLFPISALTLPPSPGLSRLPPTWASSPPELRVSTAETVAVPELVSSGALTRQQGMLVVEMLRAEDPVVFAACRVAGAAG--------------------VTLGSSTPA------GERRREWSGEAKRNFASMVKVVLGGK--------VGRGDVGS-------SVGEADGGTLRRGGKGRARGRAW-----AGEKEQQR-----CRGSQEVPESFQMDAIALADVALVTGKVS 223          
BLAST of mRNA_P-littoralis_Contig149.54.4 vs. uniprot
Match: A0A6H5L3A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A7_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 6.440e-50
Identity = 157/356 (44.10%), Postives = 174/356 (48.88%), Query Frame = 0
Query:  646 MVVAQLRRVIAGCSQLLVLRGVIGEREERALSVMSSRGSPVLLAAVEAYGTNQDLEDLLHTLQTAAEVELSLTAAIAATXXXXXTDHKIAASPQRRSMPHQQRPQQQEVHQPSLIATATSAGTASGSIDVSRSVRVHHALNVEGLKEGSTGDGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTAAVXXXAQELAAARFAGMRSAAEATSAAVGTPSEREPESSVSPSLGKGSEDE----------ETSGDRRLRQDVSQLVAVMVKQGMLTDRQRLFLLAQVGRRVTKVARERHALYVETGNWKELYTVLMALSTPAQNMAKK 991
            MVV QL RV+AGCSQLL LRGVIGEREERAL  MS+RGSPVLLAAVEAYG NQDLEDLL TLQTAAE+ELSLTAA AA       D                            + +   AG   G +D+     V  + +  G  + S G  S    XXX                                                    A  AAV   AQEL  ARFAGM+SAAEA                                      E SGDRRLRQDVSQLVAVM KQGMLTDRQRLFLLAQ+GRR+T+  RE+HA Y+ TGN KELY VL+ALS P     KK
Sbjct:    1 MVVGQLCRVVAGCSQLLRLRGVIGEREERALKTMSNRGSPVLLAAVEAYGANQDLEDLLDTLQTAAEIELSLTAAAAAVPETRRADPXXXXXXXXXXXXX-------------XLPSGVGAGGGRGGLDLGCGSGV--SRDGGGRAQASVGVSSDGESXXXGRGSDATGESIWSRPAAEVKTPA-----------------------------AAAAAVGARAQELMKARFAGMKSAAEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSGDRRLRQDVSQLVAVMAKQGMLTDRQRLFLLAQMGRRITRTTREKHAQYLATGNSKELYAVLIALSMPLPRKKKK 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.54.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FW92_ECTSI1.500e-16541.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1T6_9PHAE9.200e-5550.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3A7_9PHAE6.440e-5044.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 996..1023
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 998..1019
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 740..775
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 885..921
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..862
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 989..1058
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 893..910
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:206504..219130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.54.4mRNA_P-littoralis_Contig149.54.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig149 204194..219177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig149.54.4 ID=prot_P-littoralis_Contig149.54.4|Name=mRNA_P-littoralis_Contig149.54.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1080bp
MTMIVSVCYDDGPAEKLMIASSSSSSELTNVLCALFKIPSHERVVGLATL
TGDNGVVIPLSAACRYPNLIFQEDKRLGNVFRLVTKDAGREDEILFPISA
LTPSPPPGRSHLSPTWASSLPELRVSTTEAVVVPELVRDGCLTPGQGAAV
VAMIRAEDPVVFTACRVAGAAAATAAAAAAAGRGGGGGGGNLASVAASSG
ARGAGNGAESRREWSGEATRSFASMLKIVLRDRERRRVRRAVGLGDGGVY
HQGGELEAGEGAGGRDGNGGMWRREGRPFGADDFCGRREGERGEETTCND
SPEVPETFQSDVIALADAALVIGKITKKTYVRALYKAVTLDRRLVLAYHA
DLEQQQQQGRQDGGDVPQATLRAFTTGERSQAANGTDAAATARSQSSSAI
LGVGGMEAAATGGGNVGQGGSVTSSGANNIHEDLLAREAELRDDFLRKAL
SLIEEGSDGFTARHRAVAQRAISVGHPWVCAIYDECKETGDVRGLMQNLQ
CLPALLERDQAAAFATNISQPPPPGEADSPSWPRHQQQQQQQVSLQSESQ
PPPQQQQQQEPQHQRQQVRQRSGSRNPPSLSAGVAAKKPDAAALSSVAIE
ALASGDYAETEVGVGKAAGSADAADSRLGSSGRSADGQTGTPAFDMVVAQ
LRRVIAGCSQLLVLRGVIGEREERALSVMSSRGSPVLLAAVEAYGTNQDL
EDLLHTLQTAAEVELSLTAAIAATATTAATDHKIAASPQRRSMPHQQRPQ
QQEVHQPSLIATATSAGTASGSIDVSRSVRVHHALNVEGLKEGSTGDGSR
SSGDGSRSSGDDDDDSTTIRGDASSVAEDDATLAEEDAATEDVRSSAGPG
AQSSGPAAARTAAVGARAQELAAARFAGMRSAAEATSAAVGTPSEREPES
SVSPSLGKGSEDEETSGDRRLRQDVSQLVAVMVKQGMLTDRQRLFLLAQV
GRRVTKVARERHALYVETGNWKELYTVLMALSTPAQNMAKKRGGGLEDDD
EDDEEEEEEEEEGEEESDQEEEKNGWKEGASKKGLGGEAGVERASGGAGS
DFGGAISRASLAGVLGRHGASEACDAPES*
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