mRNA_P-littoralis_Contig149.38.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: D7FW86_ECTSI (Sterol C-5 desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW86_ECTSI) HSP 1 Score: 546 bits (1406), Expect = 4.640e-190 Identity = 256/288 (88.89%), Postives = 270/288 (93.75%), Query Frame = 3
Query: 141 AATTNTPQLVKEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGY-REPSTSASKKIT 1001
A T++P+LVKEFNAWIN FLFSE + DAMGAKAAHYFLTYVRNFLGGSILYYITA++WHWVIY+KMG TLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGL+GY+LYT +YL VEIGIYWMHRTLHTNKFLYKYVHALHHKYNS ETLSPWASIAFNPLDGVLQACPYVI LFFIPCHYYTHMAMFMFTAIWATNIHDAVPGN+EPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGY +EPST A+KK +
Sbjct: 3 AGATSSPELVKEFNAWINSFLFSEGTIKTARDAMGAKAAHYFLTYVRNFLGGSILYYITAAMWHWVIYVKMGRTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLIGYVLYTVVYLTFVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSPETLSPWASIAFNPLDGVLQACPYVICLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNSEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYSQEPSTDAAKKAS 290
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A835YRT7_9STRA (Sterol C-5 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT7_9STRA) HSP 1 Score: 349 bits (895), Expect = 1.780e-112 Identity = 164/277 (59.21%), Postives = 200/277 (72.20%), Query Frame = 3
Query: 171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG--MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYREPSTSASKK 995
KEFN W+N ++ E+ +A+G AAH+ + Y R+ + GSI+YY + +WH IY FP G +P I DQI LAQ S +YA LPVL E+ IEEGYTR Y+ S+VGG Y+ T LYL VEIGIYWMHR LHTNK LYKYVHALHHKYN A+TL+PW S+AFNPLDG+LQACPYVI LF +PCHY TH+ M FTA+WATNIHDA+ G+TEPIMG+KYHT+HHTHYHVNFGQFF FCD +WGTL+ P+ +PS++ KK
Sbjct: 45 KEFNQWVNSYIIPEAWTAAADEALGPYAAHFVVMYFRDLVAGSIMYYTVSGLWHLYIYHLKRDKFFPDGQLLPTRETIVDQIMLAQASLFMYAGLPVLSEWLIEEGYTRAYYSISEVGGWPQYVALTLLYLTLVEIGIYWMHRKLHTNKILYKYVHALHHKYNKAQTLTPWCSVAFNPLDGILQACPYVIMLFVVPCHYLTHVVMLFFTAVWATNIHDALDGDTEPIMGSKYHTMHHTHYHVNFGQFFVFCDWFWGTLRDPK-----AKPSSAQLKK 316
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A6V1TBS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TBS5_HETAK) HSP 1 Score: 345 bits (884), Expect = 7.920e-111 Identity = 154/276 (55.80%), Postives = 199/276 (72.10%), Query Frame = 3
Query: 171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYREPSTSASKKI 998
KEFN W+N F++SES+ + +G H LTY R+ + G I Y+I A+ W + +YI P+ + DQ+++A ++ YA LPV + FIE GYTR Y+ +DVGGL GY+ +TA+Y+A VEIGIYWMHR LHTNKFLYK+VHALHHKYN TL+PWASIAFNPLDG+LQACPY+I FF+PCHY TH+ + FTA+WATNIHD + G++EPIMG+KYH +HHTHYH NFGQFF FCD +WGTLKRP+D+R + + KK+
Sbjct: 43 KEFNRWLNSFIYSESLVDYCDKKLGETGGHIALTYFRDLIAGYITYFIVAAPWAYYVYIHGKGRFSEVEAPSRETVLDQVRMACVAVPAYATLPVASQLFIEGGYTRVYYSLADVGGLGGYLFFTAVYIAFVEIGIYWMHRVLHTNKFLYKHVHALHHKYNKPSTLTPWASIAFNPLDGLLQACPYLIATFFVPCHYLTHLILLFFTALWATNIHDTLNGDSEPIMGSKYHLIHHTHYHCNFGQFFIFCDWFWGTLKRPEDLRSRKAEAAEDKKKL 318
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A4D9D2S1_9STRA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2S1_9STRA) HSP 1 Score: 341 bits (875), Expect = 5.900e-109 Identity = 156/261 (59.77%), Postives = 195/261 (74.71%), Query Frame = 3
Query: 177 FNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG---MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQ 950
FN W+N FLFS++V +G AHYFLTYVR+ + GS+LYY+TA +WH +Y G F + P+ A I DQIQLAQ S +YA LPVL E+ +E G+T+CY++ ++GG Y+ +T LYLA VE+G+YWMHRTLH NK LYKY+H LHHKYN TLSPWAS+AFNP+DG+LQA PYVI LF +PCHY TH+AM FTA+WATNIHDA+ GNTEP+MG+KYHT+HHTHYH NFGQFF F D +GTL+ P+
Sbjct: 64 FNDWVNAFLFSDAVKADVMARLGPAGAHYFLTYVRDLVAGSVLYYLTAGLWHTYVYQWHGDYFFTQQGFEKPSAATIKDQIQLAQTSMFLYAALPVLAEWLVESGWTQCYYYVEEIGGWPYYLAFTLLYLAMVEVGVYWMHRTLHENKVLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVICLFLVPCHYLTHVAMVFFTAVWATNIHDAMDGNTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPE 324
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7R9UEU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEU8_9STRA) HSP 1 Score: 339 bits (870), Expect = 2.220e-108 Identity = 157/270 (58.15%), Postives = 193/270 (71.48%), Query Frame = 3
Query: 171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG----MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYR 968
+ N ING FSE+ + G + +Y +TY+R+ + G ++YYI A +WH +IY + +F KG +P A IWDQI LAQ S YA LPV + +E GYTR YF+ ++GG Y+ +T Y VEIGIYW+HRTLHTNKFLYKYVHALHHKYNSA TLSPWASIAFNPLDG+ QA PYV+ +F +PCHY TH+ M FT IW+TNIHDAVPGN EPIMGAKYHTVHHTHYH NFGQ F +CD++WGTLK P+++R R
Sbjct: 69 RALNDLINGIFFSEATRRGFEERFGEELGYYMVTYLRDLIAGILVYYIAAGVWHIMIYHVLRERIF-KGQEDQIPTAATIWDQICLAQASVFCYAALPVFSSWLVENGYTRAYFYVDEIGGWSNYLAWTVAYFVLVEIGIYWVHRTLHTNKFLYKYVHALHHKYNSAATLSPWASIAFNPLDGIAQASPYVVAMFLVPCHYITHLLMLFFTGIWSTNIHDAVPGNIEPIMGAKYHTVHHTHYHYNFGQIFIYCDKFWGTLKTPEEIRQLR 337
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7S2UWH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWH0_9STRA) HSP 1 Score: 338 bits (868), Expect = 2.860e-108 Identity = 159/265 (60.00%), Postives = 187/265 (70.57%), Query Frame = 3
Query: 171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPK--GMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMR 959
+EFN W+N F FS+++ + + G H TYVR+ + G I+YY WHW IYI+ G FP+ P VIWDQ+ LAQ S VYAMLPV + IE GYTR Y+ SDVGG Y Y A YL VE GIYW+HRTLHTNKFLYK+VHALHHKYN TLSPWASIAFNP+DGV QA PYV LF IPCHY+TH+AM FT +WATNIHD + GNTEP+MG+KYH VHHTHYH NFGQFF D +GTLKRP+D++
Sbjct: 55 REFNVWLNSFFFSKALMAKAEEKFGQLIGHIIFTYVRDLVAGFIVYYAVNLPWHWYIYIRHGNHFFPEEGSQPKWEVIWDQMLLAQCSLFVYAMLPVTSQLLIEYGYTRVYYSMSDVGGWQWYAAYMAAYLLFVEFGIYWVHRTLHTNKFLYKHVHALHHKYNKPTTLSPWASIAFNPVDGVAQASPYVAGLFLIPCHYFTHLAMLFFTGVWATNIHDTLHGNTEPVMGSKYHLVHHTHYHYNFGQFFILFDWLYGTLKRPEDIK 319
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7S2WVE6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVE6_9STRA) HSP 1 Score: 338 bits (866), Expect = 5.510e-108 Identity = 161/264 (60.98%), Postives = 187/264 (70.83%), Query Frame = 3
Query: 177 FNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG---MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMR 959
FN WIN + ++ + D M K AHY +TY+R+F+ G++LYY+ A +WH IY G F K MP+ +I DQIQLAQLS VYA LPV E+ IEEGYT Y+ ++GG VEIGIYWMHRTLHTNKFLYKYVH LHHKYN E LSPWAS+AFNPLDG+LQACPYVI LF +PCHY TH+ M FTA+WATNIHDA+ GNTEPIMG+KYHT HHTHYHVNFGQFF FCD +WGTL P D R
Sbjct: 60 FNQWINQMILPPAMLQYFEDRMTIKQAHYSVTYLRDFVAGTLLYYMVAGLWHLWIYHVRGERYFKKQGATMPSREIILDQIQLAQLSMFVYAGLPVFSEWLIEEGYTLAYWSIDEIGGWXXXXXXXXXXXXXVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKPELLSPWASVAFNPLDGILQACPYVICLFIVPCHYLTHVLMLFFTAVWATNIHDALDGNTEPIMGSKYHTKHHTHYHVNFGQFFIFCDWFWGTLSAPGDSR 323
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7S2GVH5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVH5_9STRA) HSP 1 Score: 328 bits (842), Expect = 1.390e-104 Identity = 153/258 (59.30%), Postives = 187/258 (72.48%), Query Frame = 3
Query: 177 FNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLF-PKGMPAPA--VIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLK 941
FN W+N LF + E T GA+ +Y + Y+R+ + LYY TA IWH IY G F +G P P+ +I +QI +AQ+S YA LPV E+ IE YT Y+ S++GG Y+++TA+YL+ VEIGIYWMHRTLHTNKFLYKYVH LHHKYN + L+PWASIAFNPLDG+LQA PYV+ LF +PCHY TH+AM FTAIWATNIHDA+ GNTEPIMG+KYHT+HHTHY VN+GQ F FCD YWGTL+
Sbjct: 49 FNNWVNHILFPSKILESTDSMFGAEWGYYAICYIRDLFAATFLYYTTAGIWHIYIYNIKGDQFFVQQGYPMPSTEIIREQIMVAQMSIFCYAALPVFSEWLIEHNYTLVYWSISEIGGWPQYLIFTAIYLSLVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKRQLLTPWASIAFNPLDGILQASPYVVALFLVPCHYLTHVAMLFFTAIWATNIHDALDGNTEPIMGSKYHTIHHTHYMVNYGQIFIFCDWYWGTLR 306
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A6U4L1I3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L1I3_9STRA) HSP 1 Score: 325 bits (833), Expect = 1.550e-102 Identity = 157/269 (58.36%), Postives = 187/269 (69.52%), Query Frame = 3
Query: 162 QLVKEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG----MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDM 956
Q +E N IN LF+E+ + G + +Y TY+R+ G +LYY+TA +WH IY M LF KG MP+ AVI DQI LAQ S YA LPV + +E YT YF+ D+GG Y+ TA Y A VEIGIYWMHRTLHTNKFLYK+VH LHHKYNS TLSPWASIAFNPLDG+ QA PYV + F+PCHY TH+ M FT IWATNIHDA+ G+TEPIMGAKYHT+HHTH+ N+GQ FTFCDQ+WGTLK +D+
Sbjct: 74 QPYRELNDLINSLLFNEAQRRGFEERFGYETGYYLCTYLRDLFFGCLLYYLTAGLWHIAIYHVMRERLF-KGREDKMPSRAVIVDQICLAQASLFCYAALPVFSSWLVENNYTAAYFYIDDIGGWANYLAITAFYFALVEIGIYWMHRTLHTNKFLYKWVHGLHHKYNSHATLSPWASIAFNPLDGIAQASPYVFVMLFVPCHYLTHLIMLFFTGIWATNIHDAIDGDTEPIMGAKYHTIHHTHFSCNYGQIFTFCDQFWGTLKTREDI 341
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A482SVV9_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVV9_9ARCH) HSP 1 Score: 312 bits (800), Expect = 2.000e-98 Identity = 146/267 (54.68%), Postives = 189/267 (70.79%), Query Frame = 3
Query: 171 KEFNAWINGFLFS----ESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLF-PKGMPAPAV--IWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQ 950
+ FN W+NG F E + D++G ++ +Y Y+R+ +GG+ +Y++TA +WH VIY F KG P P + DQ+ LAQ S VYA LP+L E+ IE G T YF+ SD+GG Y Y LY+ VEIG+YWMHRTLHTNKFLYKYVH LHHKYN TL+PWASIAFNPLDG+LQA PYV+ LFF+P HY+TH+ + F+ +WATNIHDA+ G++EPIMG+KYHT+HHTHY N+GQFF FCD ++GTL+ P+
Sbjct: 36 RNFNHWLNGHFFRLFKLEGAAQYLHDSLGEESGYYAQCYLRDLIGGTFVYWVTAGVWHVVIYYIFADKFFHSKGRPLPTTETLVDQMSLAQASLFVYAGLPILSEYLIESGVTHTYFYVSDIGGWGWYTAYLVLYITLVEIGVYWMHRTLHTNKFLYKYVHGLHHKYNKLTTLTPWASIAFNPLDGILQASPYVVCLFFVPVHYFTHIFLLFFSGVWATNIHDAMWGDSEPIMGSKYHTLHHTHYLYNYGQFFIFCDWFFGTLRVPE 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig149.38.1 >prot_P-littoralis_Contig149.38.1 ID=prot_P-littoralis_Contig149.38.1|Name=mRNA_P-littoralis_Contig149.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp MGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKGMPAPback to top mRNA from alignment at P-littoralis_Contig149:147535..152004+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig149.38.1 ID=mRNA_P-littoralis_Contig149.38.1|Name=mRNA_P-littoralis_Contig149.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4470bp|location=Sequence derived from alignment at P-littoralis_Contig149:147535..152004+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig149:147535..152004+ >mRNA_P-littoralis_Contig149.38.1 ID=mRNA_P-littoralis_Contig149.38.1|Name=mRNA_P-littoralis_Contig149.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=765bp|location=Sequence derived from alignment at P-littoralis_Contig149:147535..152004+ (Pylaiella littoralis U1_48)back to top |