mRNA_P-littoralis_Contig149.19.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig149.19.5
Unique NamemRNA_P-littoralis_Contig149.19.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig149.19.5 vs. uniprot
Match: A0A6H5L1S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1S6_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.400e-31
Identity = 244/599 (40.73%), Postives = 275/599 (45.91%), Query Frame = 3
Query: 1794 QVRALAASVAAAGAVPAAVGGQPHESRVAAGGTNKPNVESVVQALHEEVQGFKSEFKEEMQWIKTQLKRRLSGAAEFEGSGSSRPPKARRSSKGSSSRVRHNRGSWS--------------------SPQSALDFDHNHSNSGEWSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEHGYYYPYMAPPGAYPYAA----------PPTPGSYHYGGGPPPQGTA-PGYPSVYPGLLHGQGRGPRGGGGGGSERGAVEWEGGA-HHRIERRWRRSGSE-HSQ-RDHRSSDDGD--GRDGSSPRDARRDRDKRGGRELEDDGGNDDGVNAEDAAGTDPLAGPPGPVVSEDAAGAAAVEVTKRNNADDVAENDERRSAAAGEHKNLSSRVRNGRGGEKRSRRR---DGPGDGGRAAGGRSGAARRHSDGGRFVQDSASFNAS--VVPHQAGFGYRMGT-PGGGVVDPRFEPPTAPLGHGGYPSAPSHYMVHP----RSFYREHYGEAAGWVPSGPNHPYHIPAHLPS-HQRLPPYEG-HVSRRRRARSPAPEPAGGEEGVVEGGGSLERGRRSRS---------GSWDSEQMA 3419
            QVRALAASVAAAGAVPAA GG           T+ P VE +  A   ++Q   +  +E+MQ +KTQLKRR S AA  E                   R RH                          S  SA D DH+  +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   I       + A  G YPYAA          PP PG +HY GGPP QG A PGYPS+YPGL++GQG+G   G G    RG VEWEGG   H  E          HSQ RD R   DG   GR  SSP              ++DD            AG    A  P P V+E  A         R  A                                        DG GDGGRA GG S   RRHSDG   +   + +  +  +   Q GF Y +G  P GG VDPRF PP AP+G GGYP+A S YM+ P    R  Y EHYGEA GW   G +HPYH P H P  H RL  YEG +VSRRRR RSPA E   GE  V  GG                    GSW+SE MA
Sbjct: 2229 QVRALAASVAAAGAVPAAAGGP---------ATSGP-VEGLAGAGGVDMQRILAGLQEDMQGVKTQLKRRRSSAANEE-----------------VGRARHXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSATDSDHSDCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRI-------HAAQQGYYPYAAXXXXXXXXXXPPPPGYFHYPGGPPLQGGAVPGYPSMYPGLVYGQGQGRPDGIG----RGPVEWEGGGGQHSFEXXXXXXXXXXHSQQRDQRLLSDGGARGRSASSP--------------VKDDXXXXXXXXXXXXAGPR-AADLPVPAVAEKQAAXXXXXXXXRCKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSGDGGRAPGGPS---RRHSDGSHGLHVGSGYCGAGGIAEQQGGFRYPLGVAPSGGFVDPRFAPPVAPMGRGGYPAASSPYMIPPSHPPRGVYHEHYGEATGWAAGGAHHPYHAPVHPPPPHHRL--YEGGNVSRRRRTRSPAAESVEGEREV--GGXXXXXXXXXXXXXXXXXXXXGSWESEHMA 2767          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.19.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1S6_9PHAE1.400e-3140.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:113983..121175 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size4778
Hectar predicted targeting categoryother localisation
Exons4
Cds size2346
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.19.5prot_P-littoralis_Contig149.19.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig149 115062..119822 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789703.5412152-UTR-P-littoralis_Contig149:113982..1150611680789703.5412152-UTR-P-littoralis_Contig149:113982..115061Pylaiella littoralis U1_48UTRP-littoralis_Contig149 113983..115061 +
1680789703.584574-UTR-P-littoralis_Contig149:119822..1211751680789703.584574-UTR-P-littoralis_Contig149:119822..121175Pylaiella littoralis U1_48UTRP-littoralis_Contig149 119823..121175 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789703.5505316-CDS-P-littoralis_Contig149:115061..1152771680789703.5505316-CDS-P-littoralis_Contig149:115061..115277Pylaiella littoralis U1_48CDSP-littoralis_Contig149 115062..115277 +
1680789703.5588353-CDS-P-littoralis_Contig149:117147..1173211680789703.5588353-CDS-P-littoralis_Contig149:117147..117321Pylaiella littoralis U1_48CDSP-littoralis_Contig149 117148..117321 +
1680789703.5671332-CDS-P-littoralis_Contig149:117521..1179651680789703.5671332-CDS-P-littoralis_Contig149:117521..117965Pylaiella littoralis U1_48CDSP-littoralis_Contig149 117522..117965 +
1680789703.5755453-CDS-P-littoralis_Contig149:118310..1198221680789703.5755453-CDS-P-littoralis_Contig149:118310..119822Pylaiella littoralis U1_48CDSP-littoralis_Contig149 118311..119822 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig149.19.5

>prot_P-littoralis_Contig149.19.5 ID=prot_P-littoralis_Contig149.19.5|Name=mRNA_P-littoralis_Contig149.19.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=782bp
MVEGENAEKGVGEGAQPQHSREGESGTPETTRATEQEEEEEGADATGAGA
GAEEESRTIRSTRTAAAIASEKLRKRKVNDCSANWVAANSGKRKRALACS
SNDRQASPSDDEPEPEQSGAGDTEHDAPEQGRAKAAGVENEARPSALKIA
GKSDKDTSASSALVAPAVPAAPAATHAVLSSDTPAAAMPVVTAPLAAASE
EVAFGGGAASVDAPAVAAAAAADAVAAAAAAAFPAVERQVRALAASVAAA
GAVPAAVGGQPHESRVAAGGTNKPNVESVVQALHEEVQGFKSEFKEEMQW
IKTQLKRRLSGAAEFEGSGSSRPPKARRSSKGSSSRVRHNRGSWSSPQSA
LDFDHNHSNSGEWSSSDDEATRRGGRGGGSSGYRDARQRHRRSSTPASGG
GGIEHGYYYPYMAPPGAYPYAAPPTPGSYHYGGGPPPQGTAPGYPSVYPG
LLHGQGRGPRGGGGGGSERGAVEWEGGAHHRIERRWRRSGSEHSQRDHRS
SDDGDGRDGSSPRDARRDRDKRGGRELEDDGGNDDGVNAEDAAGTDPLAG
PPGPVVSEDAAGAAAVEVTKRNNADDVAENDERRSAAAGEHKNLSSRVRN
GRGGEKRSRRRDGPGDGGRAAGGRSGAARRHSDGGRFVQDSASFNASVVP
HQAGFGYRMGTPGGGVVDPRFEPPTAPLGHGGYPSAPSHYMVHPRSFYRE
HYGEAAGWVPSGPNHPYHIPAHLPSHQRLPPYEGHVSRRRRARSPAPEPA
GGEEGVVEGGGSLERGRRSRSGSWDSEQMAA*
back to top

mRNA from alignment at P-littoralis_Contig149:113983..121175+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig149.19.5 ID=mRNA_P-littoralis_Contig149.19.5|Name=mRNA_P-littoralis_Contig149.19.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=7193bp|location=Sequence derived from alignment at P-littoralis_Contig149:113983..121175+ (Pylaiella littoralis U1_48)
ATGCTCAGGCTGCCAAAGATGCTCAAGCCGCTTTGGATGCTCAAGCCGCT TTGGATGCCCAAGATGCCAAGGATGCCCAAGTCGCTTCGGACGCCCAAGC CGCTTTGGATGCTCAAGCCGCCAAGGATGCCCAAGCCGCCAAGGATGCTC AAGCCGCCAAGGATGCTCAAGCCGCCAAGGATGCCCAAGCTGCCAAGGAT GCCCAAACCGCCAAGGATGCTCAAGCCGCTTTGGATGCTCAAGCCGCCTT GGACGCCCAAGCTGCCAAGGATGCTCAAGCCTCTAAGGATGCTCAAGCCG CCAAGGATGCCCAAGCCGCCAAGGATGCTCAAGCCGCCAAGGATGCTCAA GCCGCCAAGGACGCGCAAGCCGCCAAGGACGCGCAAGCCGCTTTGGACGT TCAAGCCGCTTTGGATGCTCAAGCCGCCTTGGACGCCCAAGCTGCCAAGG ATGCTCAAGCCGCCAAGGATGCTCAAGCCGCCAAGGATGCTCAAGCCGCC AAGGATGCGCAAGCCGCTTTGGACGTTCAAGCCGCCAAGGATGCTCGAGC CGCCTTGGACGCCCAAGCTGCCAAGGATGCTCAAGCCGCCAAGGATGCTC AAGCCGCCAAGGATGCTCAAGCTGCTTTGGACGCCCAAGCCGCTTTGGAT GCGCAAGCCGCTAAGGATGCTCAAGCCGCTTTGGACGTTCAAGCCGCCAA GGATGTTCAAGCCGCTTTGGACGTTCAAGCCGCCAAAAATGCTCAAGCCG CTCTGGACGTTCAAACCGTCAAGGATGCTCAAGCCGCCAAGGATGCTCAC GCCGCTTTGGACGCCCAAGCCGCCAAGGATGCTCAAGTTGCCAAGGCCGC GCAAGAGGCTAAGGATGCACAAGCCGCTTTGGACGTTCAATTCGCTTTGG ACGCTCAAGCTGCCAAGGATGCTCAAGCCGCCAAGGATGCTCAAGCCGCT TTAGACGCTCAAACGGCTTCGGACGCTCAAACGGCTTCGGAGGCTCGAGC GGCTGAAAAGGCCGCGGCCGCTTCAGAGGCAGGCGGAGCGGCCCAGGCGG CAGCCGCGGGCCCTACAAAAGAACAAGAGATGGTAGAGGGGGAGAACGCT GAAAAGGGTGTCGGCGAAGGAGCGCAGCCTCAACATTCGCGAGAGGGAGA GAGTGGAACGCCCGAGACTACGCGGGCAACGGAACAGGAGGAAGAGGAGG AGGGCGCCGATGCTACTGGGGCTGGGGCTGGGGCTGAGGAAGAGTCGAGG ACGATTCGATCTACGAGGACGGCCGCGGCAATCGCCTCGGAGAAGGTGTG CTTGCATGCTTAACTTTTCTGCGGGTCCTCGTGTTCGTTGAGCCTTTCAA CAAATATCACAACTTTATTTTCGTGCCGAGCATATGATACTTTCGATTGC CTCCTTCTTGTTATAAACACCAGCAATGTAAACTTTGTCGATGCGTAAAA GTCTCTCAATGTGCCGACTGGCGTCATATGTAGAAGATATTTGTTTCATC CATTTCGAAGACGTGGTTCATTACCTCCGGCAGTCGAAATACTACTTTTG GGAACTTGAGTGTTTTGTGGTCGAACCGAGGCGTTGCTTTTGGGTTCCTC ACAACATTCAGCAGTGTTAGACCACTTATTATAGCTGCAAAAACCCTCCT TAGAAAAGGCCTTTTTTGATCTTGGGCGGTTTGACCACTTGTTATAGATG GAAAAACCCCCTTTTTTGATCTCAACTTTTCTAATAACTTTTTCCAATCG ACCCAATCGCTCAGAAAAATCACTTTTTCTAAGCGATTCGATCGATCAGA AAACGCTTATTGAAAAAGTTTGGGCCCTCCTCACACAGCCTCTCTCTCAC GGTGGGCCGGGTGACTTGAACAACTACATACAGCGGTATTATTTTTGCAA GCCTATCGATACCTCGCGGCCCCAGATGACCTACAGAGGAGAGGGACCAG ACACACAGCTCAAGGGCGATTGCTTTGTTGTCGCCGTGGGTTCAATCGTC CGAGAGCAATGGACGGAACTCAAAAGTAGTGTGGGGTGAGGGAGTAGGGC GGGCAGGAGGAGGGAGCCGCAGCAAGCAGCAGCAGCAGGTATTTTGTATT TTGGGCCGCTACATGAGTTTGGTCTTTCATCCATCACTGTCGAACCAATT GAGCCACAGTAATGCCAAAGCCATCGCCCGTGAGCTATGCCTCTGGTCCT TGTCCTCCGGTTGTCATCTAAGGCCGCAAGGTATCAACTGGCTAGCAATA GAAGCGTTGCAGAAACCGACGAGTTGTGAAAAAATTGAGAAGAAGGGCTG TTGAAAGAAGTCCAGCAAGTACATACTGCTGTATGCATACTTTCTGTACA GCAGTACAGACAGACGGACGGCGGAGATTTCTTCTCTTCTTTCACGAGTG ATCGGTTTCTGCAAGAGCTAGATTGCTAGCCTGTTGATGCTTTGCGGCCC AAGATTACCTAATGAGGAGAGGGACAACACACACAGCTCACGGTCGATGG CTTCGGTATTGCTTTGGCTCAATTGGTTCGATAGTTCTGGAAGAGAAACC AAACTGGTGTACCTGCGCCAAATATCTTGCTGCCCTGCTCCTGCTGCGGA CTTCCTTCTCTTTTCCTATTTTTTTCACACGTCATCGACGCCTGCACTCT TTTTTGTGAGCCTGTTGACGCCTCGCGGCCTCAAAGGACAATCAGAGATG CACGACCATACACACAGCCTACGAGGCATGGCTTTGATATTGCTGTGGCT TCATTCATTCGAAAGTAATCAACAAATACGCTACAGCAGCAGCAGCAGCA GCAGCAGCAGCCTGTTGAAACGATGTCAACACCGTCTGTCTGTAAAAAAA AAATGAATCACCCACGGAAAAAATAAAATCAATCGCTGTTATAAGAAGTG GTGCTTTTCGAAGATCCTGTTGGAATTCTTCTTATTGAAAAAGGCGAATT CTAAGGAGATTTTTTTCAGCTACAATAAGTGGTCTTAAGAGCTAGGGCAT TGCAAGCGGGATTATTTTTCCGCTTGCATGTAAGAGCCGTCTCAGTCTAA CCCGATGTCGTTGCGAACCCCCCCCCCCGCTCCCCTCTCCGCCGGAAAAT CCACCTCGACAAATATTGAATGCGTTTCCTCAAACCGCCGCCCGCTGCTG TGCGAATTTCCTCAGCTTCGAAAACGAAAGGTCAACGATTGTTCAGCCAA CTGGGTCGCCGCCAACAGTGGGAAGCGCAAGCGCGCCCTGGCATGTTCAT CGAATGACAGGCAGGCTTCGCCCAGCGATGACGAACCTGAACCCGAGCAG AGTGGCGCTGGTGACACCGAACATGATGCTCCTGAACAGGTGGGGTTAGC GTTAAGGTGCGGACGATTTTTTTTGCTCCCTGTTCCGGCCGTACTTGAGA GAAAATCCACAAGGAGTTGAATTGAAGATTCAGAAATGTTTGCCCTCGTC TGTCCCGAGTTATCAGTCTCCAGTACTTGTGTTTTCACCGGTATTTGTGT CATAGTTCCCATCGGTCGCTTGTTCTTGCCAAAAAGTAGGGTCGGGCGAA AGCAGCGGGTGTGGAGAATGAAGCGCGGCCTTCGGCGCTCAAGATTGCCG GGAAATCGGACAAGGACACGTCTGCGAGTAGCGCGCTTGTCGCGCCTGCC GTGCCTGCCGCGCCCGCCGCCACTCATGCCGTATTATCGAGCGACACACC GGCAGCAGCGATGCCCGTAGTGACCGCACCGTTGGCAGCGGCCAGCGAAG AGGTGGCGTTTGGTGGTGGTGCTGCTTCGGTGGATGCGCCTGCTGTTGCT GCCGCCGCTGCTGCTGATGCTGTTGCTGCCGCCGCAGCCGCCGCCTTCCC AGCTGTAGAACGCCAGGTGCGGGCTCTTGCCGCCTCCGTTGCTGCTGCCG GGGCTGTGCCAGCCGCGGTTGGTGGACAGCCACACGAAAGCAGGGTCGCA GCTGGAGGAACCAACAAGCCAAATGTGGAATCGGTAAGATTCGTTGCGTT TTGTCGTGAGGGTCGGGCAGGAAGCAAGTTTCAGAGAGCAGAGAGCAGAG AGTGAAGTAGACAACGGATGCCCAGGGGCTGCTGGTGTTCCAAGGTCCGG GTGTAGAGAGAACGGTTTTGCACTTTTACCCCACCCCCCCATCCTTTCCC CAACTCACGCCCCTGCTGCTCCTCCTCGCCAAGGTTCTTCACCGGGTCTC TGGGACGTGTAAGAGTTTTTCGTCGCATTTGGCTTTTTTTGGAAACGACT TTCAACCGCCCCCCCTCACCCCGTTCTCGTATTTGTGCTTGCTATACACC ACTTTACGTGCAAAACCATAATCGGCAGGTGGTGCAGGCCCTGCATGAAG AGGTGCAAGGGTTTAAGAGCGAGTTCAAGGAAGAGATGCAATGGATCAAG ACCCAGCTGAAGCGCCGCCTCAGCGGCGCCGCCGAGTTCGAGGGTAGCGG TAGCAGTAGGCCCCCCAAGGCGCGCCGGAGCTCCAAGGGCTCGTCGTCGC GAGTGCGCCACAACCGTGGCTCGTGGAGCTCGCCACAATCTGCGTTAGAC TTCGATCACAACCACTCGAACTCGGGCGAGTGGTCTAGCTCAGACGATGA AGCGACAAGACGCGGGGGCAGGGGCGGGGGCAGCAGTGGATATCGAGATG CCCGCCAACGCCACCGCAGGTCGTCCACACCGGCCAGCGGAGGTGGTGGA ATTGAGCACGGTTATTATTACCCTTACATGGCTCCGCCTGGTGCGTACCC CTACGCCGCCCCGCCCACGCCGGGGTCCTATCACTACGGGGGGGGACCAC CTCCTCAAGGCACGGCTCCCGGCTACCCATCGGTCTACCCGGGTTTGCTC CACGGGCAAGGTCGCGGCCCACGCGGTGGCGGTGGCGGCGGCAGCGAAAG AGGCGCAGTGGAATGGGAAGGAGGGGCGCACCACCGCATCGAACGCCGAT GGCGTCGAAGCGGGTCGGAACACAGCCAGCGTGATCACCGTTCTTCAGAC GATGGCGACGGTCGGGACGGTTCGTCTCCTCGTGATGCGCGTCGCGACAG AGACAAGCGGGGCGGGCGCGAGCTGGAGGACGACGGCGGAAACGATGATG GTGTGAACGCCGAAGATGCAGCCGGCACCGACCCCCTTGCCGGTCCTCCG GGACCCGTTGTTTCTGAGGATGCAGCAGGAGCAGCAGCAGTGGAGGTAAC AAAAAGAAACAACGCGGACGACGTTGCCGAGAACGATGAGCGAAGGAGTG CGGCCGCGGGGGAGCACAAAAACTTGTCGTCTCGTGTGCGTAACGGTCGA GGAGGCGAGAAGCGCTCGCGACGGAGGGATGGACCGGGAGATGGTGGACG TGCGGCAGGAGGACGGTCGGGCGCTGCCCGCCGTCACAGCGATGGCGGCC GTTTCGTGCAGGATAGCGCGAGCTTCAATGCGAGTGTGGTTCCGCATCAG GCCGGCTTTGGGTACCGGATGGGTACCCCAGGTGGTGGTGTTGTCGACCC GCGATTCGAGCCTCCGACAGCACCTCTAGGCCATGGGGGCTACCCCTCGG CTCCTTCCCACTACATGGTGCATCCTCGCAGCTTCTACCGCGAGCACTAC GGTGAGGCCGCTGGTTGGGTACCCAGCGGCCCTAACCACCCGTATCACAT ACCTGCCCACCTTCCATCCCACCAGAGACTGCCGCCGTATGAGGGCCATG TTTCCCGCAGGCGTAGGGCACGCTCACCCGCACCAGAGCCTGCTGGTGGA GAGGAGGGTGTAGTCGAGGGTGGGGGTAGCTTGGAAAGGGGCAGGAGGAG CAGGAGCGGGAGCTGGGACAGTGAACAGATGGCGGCGTAACTTACTTGAG GCGTTAGCGATGTCGGTGCGTTGTAAGACGGGGGGTGGGTGGCCGAAGGA GCTTTTTGAATTTAGGATTCCGTTCTACCTTTCGGTTGCCTTGATATGTA TTGGCAATGTTCGGTGCTTGCCTCTGGTGACGAGGGAGCTTGTTGATGGG GAAGGAACACGAGCGTTATGATTCTGCATGGTTTTCATATGTGCGAGACC GGAGGGACGAAAGATATTTTTTTTAGAAAGATGAACGCTCCTGATTGCCG GAGTGTTGTTTCGACTAGAGGGTGTTTGTGAATTATCAACCATAACTTGA ATGATAGCCCAGTCGCTCTCGGCCTTTCATTTGCGGGCGAGTTGGTCTGT GCCTGTGTGTATTTGCATTATATTATGTTTTACACATTTCAAAAGAAAAA GTTGGTTTCAGATCGAATTTCTTGTCGGGGAAAGACTGTATTGATTGTAT TGTTTGGTATCATGCCTGAAAATGTTACACAAATTGTTTTTGACAAATCG GCATGAGTCGCTGGTACTTTGTTGTGAGGGGCTCTCTTATCTCTCAAAGT CCGCCTTGGTAGTCGATGCTACCTCTGCAGTAGACCCACCCTCCCACGAA GGGCTACCCATCCCGCCCCCCAGCTGCCCGTGTCCCTGGTGGTGAAAAGT ACCATATAAGGTAGCAGCGGAACGGCCTTGTGGTGCCACGTGTTGGTGAC CACGCTTCGTTCTGCATACGTCTAGTGTCTACAGTGTAGTAGGAGGTAAA CGTTAACGAACACCCGTAATTACTTGAGGCACAGAAAAATACGTCGAATG CCCGGCGTTCATCTGTGATGTTGGTCCCGGAAAGGAAGTATGCTAATTTG GAACCGCTGGTCTAGAAGTATGCCCCACTATTTGGGTGCCAGGTCACCGC TGTTTGGCGCAAAACGCATACATTCTCAAGCCCAACTGGCCGGGTTTCCT CTATACATCCTACCCTGTCTTAAATATCAGGGCTGCCCGTCGTGTTTGCT GTTTAGTGCACCCGCGCGTTGTTCCTAGAAGAAGCCTACGGCTGAGCACT TTTTTTTTGCAAGGCATGCGCGATGCGGGTACATTTTTTTGTTCATCGTC TTTATTATTTCTAGAACCAATGGAACGTGGTTTTACGTAAGTGAGCTCAC CATTCGTGCTTTGTGAGAGAGAGAAGCATCTTGAATCACGTACGAGAGCT CACTACTGTACCCTCTACGCGTGCATCGTGAGAGAGCTCATAGAACTCGA TGAAGGAAGGCTCGTTTCAAAAATCGACGAAGAGGAATCTGCAGTGTGCC GAAAGAACCTGGATCCCTTACACTACTAGTTATTGGTCACAGC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig149:113983..121175+

>mRNA_P-littoralis_Contig149.19.5 ID=mRNA_P-littoralis_Contig149.19.5|Name=mRNA_P-littoralis_Contig149.19.5|organism=Pylaiella littoralis U1_48|type=CDS|length=2346bp|location=Sequence derived from alignment at P-littoralis_Contig149:113983..121175+ (Pylaiella littoralis U1_48)
ATGGTAGAGGGGGAGAACGCTGAAAAGGGTGTCGGCGAAGGAGCGCAGCC
TCAACATTCGCGAGAGGGAGAGAGTGGAACGCCCGAGACTACGCGGGCAA
CGGAACAGGAGGAAGAGGAGGAGGGCGCCGATGCTACTGGGGCTGGGGCT
GGGGCTGAGGAAGAGTCGAGGACGATTCGATCTACGAGGACGGCCGCGGC
AATCGCCTCGGAGAAGCTTCGAAAACGAAAGGTCAACGATTGTTCAGCCA
ACTGGGTCGCCGCCAACAGTGGGAAGCGCAAGCGCGCCCTGGCATGTTCA
TCGAATGACAGGCAGGCTTCGCCCAGCGATGACGAACCTGAACCCGAGCA
GAGTGGCGCTGGTGACACCGAACATGATGCTCCTGAACAGGGTCGGGCGA
AAGCAGCGGGTGTGGAGAATGAAGCGCGGCCTTCGGCGCTCAAGATTGCC
GGGAAATCGGACAAGGACACGTCTGCGAGTAGCGCGCTTGTCGCGCCTGC
CGTGCCTGCCGCGCCCGCCGCCACTCATGCCGTATTATCGAGCGACACAC
CGGCAGCAGCGATGCCCGTAGTGACCGCACCGTTGGCAGCGGCCAGCGAA
GAGGTGGCGTTTGGTGGTGGTGCTGCTTCGGTGGATGCGCCTGCTGTTGC
TGCCGCCGCTGCTGCTGATGCTGTTGCTGCCGCCGCAGCCGCCGCCTTCC
CAGCTGTAGAACGCCAGGTGCGGGCTCTTGCCGCCTCCGTTGCTGCTGCC
GGGGCTGTGCCAGCCGCGGTTGGTGGACAGCCACACGAAAGCAGGGTCGC
AGCTGGAGGAACCAACAAGCCAAATGTGGAATCGGTGGTGCAGGCCCTGC
ATGAAGAGGTGCAAGGGTTTAAGAGCGAGTTCAAGGAAGAGATGCAATGG
ATCAAGACCCAGCTGAAGCGCCGCCTCAGCGGCGCCGCCGAGTTCGAGGG
TAGCGGTAGCAGTAGGCCCCCCAAGGCGCGCCGGAGCTCCAAGGGCTCGT
CGTCGCGAGTGCGCCACAACCGTGGCTCGTGGAGCTCGCCACAATCTGCG
TTAGACTTCGATCACAACCACTCGAACTCGGGCGAGTGGTCTAGCTCAGA
CGATGAAGCGACAAGACGCGGGGGCAGGGGCGGGGGCAGCAGTGGATATC
GAGATGCCCGCCAACGCCACCGCAGGTCGTCCACACCGGCCAGCGGAGGT
GGTGGAATTGAGCACGGTTATTATTACCCTTACATGGCTCCGCCTGGTGC
GTACCCCTACGCCGCCCCGCCCACGCCGGGGTCCTATCACTACGGGGGGG
GACCACCTCCTCAAGGCACGGCTCCCGGCTACCCATCGGTCTACCCGGGT
TTGCTCCACGGGCAAGGTCGCGGCCCACGCGGTGGCGGTGGCGGCGGCAG
CGAAAGAGGCGCAGTGGAATGGGAAGGAGGGGCGCACCACCGCATCGAAC
GCCGATGGCGTCGAAGCGGGTCGGAACACAGCCAGCGTGATCACCGTTCT
TCAGACGATGGCGACGGTCGGGACGGTTCGTCTCCTCGTGATGCGCGTCG
CGACAGAGACAAGCGGGGCGGGCGCGAGCTGGAGGACGACGGCGGAAACG
ATGATGGTGTGAACGCCGAAGATGCAGCCGGCACCGACCCCCTTGCCGGT
CCTCCGGGACCCGTTGTTTCTGAGGATGCAGCAGGAGCAGCAGCAGTGGA
GGTAACAAAAAGAAACAACGCGGACGACGTTGCCGAGAACGATGAGCGAA
GGAGTGCGGCCGCGGGGGAGCACAAAAACTTGTCGTCTCGTGTGCGTAAC
GGTCGAGGAGGCGAGAAGCGCTCGCGACGGAGGGATGGACCGGGAGATGG
TGGACGTGCGGCAGGAGGACGGTCGGGCGCTGCCCGCCGTCACAGCGATG
GCGGCCGTTTCGTGCAGGATAGCGCGAGCTTCAATGCGAGTGTGGTTCCG
CATCAGGCCGGCTTTGGGTACCGGATGGGTACCCCAGGTGGTGGTGTTGT
CGACCCGCGATTCGAGCCTCCGACAGCACCTCTAGGCCATGGGGGCTACC
CCTCGGCTCCTTCCCACTACATGGTGCATCCTCGCAGCTTCTACCGCGAG
CACTACGGTGAGGCCGCTGGTTGGGTACCCAGCGGCCCTAACCACCCGTA
TCACATACCTGCCCACCTTCCATCCCACCAGAGACTGCCGCCGTATGAGG
GCCATGTTTCCCGCAGGCGTAGGGCACGCTCACCCGCACCAGAGCCTGCT
GGTGGAGAGGAGGGTGTAGTCGAGGGTGGGGGTAGCTTGGAAAGGGGCAG
GAGGAGCAGGAGCGGGAGCTGGGACAGTGAACAGATGGCGGCGTAA
back to top