prot_P-littoralis_Contig149.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig149.14.1
Unique Nameprot_P-littoralis_Contig149.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length127
Homology
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BLAST of mRNA_P-littoralis_Contig149.14.1 vs. uniprot
Match: C1EFP8_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EFP8_MICCC)

HSP 1 Score: 52.0 bits (123), Expect = 3.530e-5
Identity = 46/152 (30.26%), Postives = 69/152 (45.39%), Query Frame = 0 
Query:    9 DSGVREQAQLWGKDESLSELNLSAHKIGPGAAEALARALRESL-----------------------------SITSVNCSLNPALGDE-GARLLVPALRTDGTGVSTVRVLSLMRCGIGHVGAAALAQGLRRNSVLERLNLTGNSL---GDA 127
            D+ +   A+    + S++ L+LS +KIG   A  LAR L +                               S+T ++  LNP +GDE GA +L     + GT   ++R L +  CG+G   A ALA+ LR N  L R++ +GN     GDA
Sbjct:  268 DAKLEPLAEGLATNASVTSLDLSKNKIGCDGARVLARVLAKDACVVSRXXXXXXXXXXXXXXXXXXXXXXXXSLTYLSLRLNPKIGDEAGAAVLDAVTESGGT---SMRELDVSACGLGPKSARALARLLRNNRTLRRIDASGNETLGAGDA 416
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BLAST of mRNA_P-littoralis_Contig149.14.1 vs. uniprot
Match: V5BN05_TRYCR (Ribonuclease inhibitor n=1 Tax=Trypanosoma cruzi Dm28c TaxID=1416333 RepID=V5BN05_TRYCR)

HSP 1 Score: 51.6 bits (122), Expect = 4.950e-5
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:   24 SLSELNLSAHKIGPGAAEALARALRESLSITSVNCSLNPALGDEGARLLVPALRTDGTGVSTVRVLSLMRCGIGHVGAAALAQGLRRNSVLERLNLTGNSLGD 126
            +L EL+L+ +++ P   +A+A+ALR S  + S++ S NP  G E   +  P L T G+G++    LSL  C +      A+   L  N  +  LNL+ N +GD
Sbjct:  264 ALKELDLAFNRLEPSGIDAIAKALRASPQLQSLDLSGNP--GVEPPSMRAPLLVTKGSGIAR---LSLRSCKLHFALFGAMNAELMSNGDIVELNLSANPIGD 361
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BLAST of mRNA_P-littoralis_Contig149.14.1 vs. uniprot
Match: Q4CNN5_TRYCC (Ribonuclease inhibitor, putative (Fragment) n=2 Tax=Trypanosoma cruzi TaxID=5693 RepID=Q4CNN5_TRYCC)

HSP 1 Score: 51.2 bits (121), Expect = 6.970e-5
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:   24 SLSELNLSAHKIGPGAAEALARALRESLSITSVNCSLNPALGDEGARLLVPALRTDGTGVSTVRVLSLMRCGIGHVGAAALAQGLRRNSVLERLNLTGNSLGD 126
            +L EL+L+ +++ P   +A+A+ALR S  + S++ S NP  G E   +  P L T G+G++    LSL  C +      A+   L  N  +  LNL+ N +GD
Sbjct:  458 ALKELDLAFNRLEPSGIDAIAKALRASPQLQSLDLSGNP--GVEPPSMRAPLLVTKGSGIAR---LSLRSCKLHFALFGAMNAELLSNGDIVELNLSANPIGD 555
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BLAST of mRNA_P-littoralis_Contig149.14.1 vs. uniprot
Match: A0A2V2V4V3_TRYCR (FERM domain-containing protein n=4 Tax=Trypanosoma cruzi TaxID=5693 RepID=A0A2V2V4V3_TRYCR)

HSP 1 Score: 50.8 bits (120), Expect = 9.720e-5
Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 0 
Query:   24 SLSELNLSAHKIGPGAAEALARALRESLSITSVNCSLNPALGDEGARLLVPALRTDGTGVSTVRVLSLMRCGIGHVGAAALAQGLRRNSVLERLNLTGNSLGD 126
            +L EL+L+ +++ P   +A+A+ALR S  + S++ S NP +     R   P L T G+G++    LSL  C +      A+   L  N  +  LNL+ N +GD
Sbjct:  738 ALKELDLAFNRLEPSGIDAIAKALRASPQLQSLDLSGNPGVEPPSTR--APLLVTKGSGIAR---LSLRSCKLHFALFGAMNAELMSNGDIVELNLSANPIGD 835
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
C1EFP8_MICCC3.530e-530.26Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
V5BN05_TRYCR4.950e-533.98Ribonuclease inhibitor n=1 Tax=Trypanosoma cruzi D... [more]
Q4CNN5_TRYCC6.970e-533.98Ribonuclease inhibitor, putative (Fragment) n=2 Ta... [more]
A0A2V2V4V3_TRYCR9.720e-533.01FERM domain-containing protein n=4 Tax=Trypanosoma... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 83..110
e-value: 1.1
score: 16.9
coord: 57..78
e-value: 97.0
score: 3.1
coord: 22..49
e-value: 0.97
score: 17.2
NoneNo IPR availablePANTHERPTHR24113:SF10LEUCINE RICH REPEAT FAMILY PROTEINcoord: 7..126
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 7..126
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 8..126
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 85..105
e-value: 0.077
score: 13.1
coord: 24..44
e-value: 0.76
score: 10.0
coord: 111..126
e-value: 0.32
score: 11.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 81..127
e-value: 5.0E-10
score: 41.2
coord: 4..80
e-value: 5.6E-11
score: 44.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:44316..47051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.14.1mRNA_P-littoralis_Contig149.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig149 44316..47070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig149.14.1 ID=prot_P-littoralis_Contig149.14.1|Name=mRNA_P-littoralis_Contig149.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp
MVPDGQYGDSGVREQAQLWGKDESLSELNLSAHKIGPGAAEALARALRES
LSITSVNCSLNPALGDEGARLLVPALRTDGTGVSTVRVLSLMRCGIGHVG
AAALAQGLRRNSVLERLNLTGNSLGDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf